Semicossyphus pulcher (California sheephead): 138592488
Help
Entry
138592488 CDS
T10596
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138592488 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138592488 (hspd1)
03110 Chaperones and folding catalysts [BR:
spul03110
]
138592488 (hspd1)
03029 Mitochondrial biogenesis [BR:
spul03029
]
138592488 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spul04147
]
138592488 (hspd1)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
138592488 (hspd1)
Messenger RNA biogenesis [BR:
spul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
138592488 (hspd1)
Chaperones and folding catalysts [BR:
spul03110
]
Heat shock proteins
HSP60 / Chaperonin
138592488 (hspd1)
Mitochondrial biogenesis [BR:
spul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
138592488 (hspd1)
Exosome [BR:
spul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138592488 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
138592488 (hspd1)
Exosomal proteins of breast cancer cells
138592488 (hspd1)
Exosomal proteins of colorectal cancer cells
138592488 (hspd1)
Exosomal proteins of bladder cancer cells
138592488 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
138592488
NCBI-ProteinID:
XP_069519410
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVEHVINELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKVEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVSTGGTVFGEEALGLALEDIQAHDFGKIGEVQITKDDTLLLKG
GGNPADVEKRAAEIVEQLESTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDDVKTANSDQKIGVDIIRRALRIPSMTIA
KNAGVEGSLVVEKILQGSAELGYDAMQGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGGGMGGMGGMGGMGGMGF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtttaccaacagtcatgaagcaggtgaggccagtgtgccgggcgctggctcct
cacctgacacgagcctacgctaaggatgtgaagtttggcgctgatgcccgagctctcatg
ctgcaaggagttgacctgctggctgacgctgtggccgtcaccatgggcccaaagggtcgc
accgtcatcattgagcagagctggggcagcccgaaggtcacaaaggacggcgtgacggtg
gccaagagcatcgacctgaaggacaagtacaagaacatcggtgccaagctggtgcaggac
gtcgccaacaacacaaacgaggaggccggcgacggcaccaccaccgccacagtgctggcc
cgggccattgccaaggagggcttcgacaccatcagcaagggcgccaaccccgtggagatc
cgtcgcggagtcatgatggccgtggaacatgtcatcaatgagctgaaaaagctttcaaag
ccggtcaccacacctgaggagatcgcacaggtcgctacaatctcagctaacggagacgtg
gagatcgggaacatcatttccaacgccatgaagaaagtcggccgcaagggagtcatcact
gtcaaggatgggaagactctgcacgatgagctggagatcattgagggcatgaagttcgac
cgtggctacatctccccttacttcatcaacactgccaaaggtcagaaggttgagttccag
gacgcctacctgctgctgagcgagaagaagatctccagcgtgcagagcatcgtgccggct
ctggagatcgccaaccagcaccgcaaaccgctggtgatcgtggccgaggatgtggatgga
gaggcgctcagcacgctcgtgctcaacaggctgaaggtcgggcttcaggttgtggctgtt
aaagctccaggtttcggcgacaacagaaagaaccagctgagggatatggcagtcagcacc
gggggcactgtgtttggagaggaggctctgggtctggctctcgaggacatccaggctcac
gactttggtaaaatcggcgaggtgcagatcaccaaagacgacaccctgctgctgaaggga
ggaggaaaccccgctgacgtggagaaacgggctgcagagatcgttgagcagctggagagc
acgacgagcgactacgagaaggagaagctcaacgagaggctcgccaagctgtctgacgga
gtcgctgtgctcaagatcggaggaacgagcgacgtggaggtgaatgagaagaaggacaga
gttacagatgccctgaacgccacacgagcagcggtggaggagggaatcgtaccgggagga
ggctgcgctctgctgcgctgcatcccgtcactggatgacgtcaaaactgcaaactctgac
cagaagattggtgtggacatcatcaggcgggcgctcaggatcccctcaatgaccatcgct
aagaacgccggtgtggagggctctctggtggtggagaagatcctgcagggatcagctgag
cttggctacgacgccatgcagggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtcaggacggccctcctggacgccgcaggagtcgcctccctgctctcc
accgccgaggctgtcgtcacggagatccccaaggaggagaaggagatgcccggaggcggc
ggcatgggaggaatgggaggaatgggcggtatgggaggcatgggcttctaa
DBGET
integrated database retrieval system
