Semicossyphus pulcher (California sheephead): 138592643
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Entry
138592643 CDS
T10596
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04382
Cornified envelope formation
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04514
Cell adhesion molecule (CAM) interaction
spul04518
Integrin signaling
spul04810
Regulation of actin cytoskeleton
spul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138592643 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
138592643 (itga6a)
04518 Integrin signaling
138592643 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138592643 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138592643 (itga6a)
04810 Regulation of actin cytoskeleton
138592643 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138592643 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spul04147
]
138592643 (itga6a)
04515 Cell adhesion molecules [BR:
spul04515
]
138592643 (itga6a)
04090 CD molecules [BR:
spul04090
]
138592643 (itga6a)
Exosome [BR:
spul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138592643 (itga6a)
Exosomal proteins of breast milk
138592643 (itga6a)
Cell adhesion molecules [BR:
spul04515
]
Integrins
Integrin alpha subunits
138592643 (itga6a)
CD molecules [BR:
spul04090
]
Proteins
138592643 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Protocadherin
DUF5920
Motif
Other DBs
NCBI-GeneID:
138592643
NCBI-ProteinID:
XP_069519579
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MMLQGGLSAASVALLFYFSSLEQVLVLAFNLDTSHVIRKDGEPGSLFGFSLAMHRQLNPD
KRMLLIGAPRARALGKQTANITGGLYKCEITQTTDCERIVFDNEENVRIENKENQWMGVT
VQSQGPGGKIVTCAHRYQRRLFVNTPQESRDITGRCYVLSQDLTIDTASDEDGGNWNFCE
GRARGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGVYDDGP
YEVGDEHLLNPELVPLPANSYLGFSLDSGHNIMRSRGLTVVAGAPRANHSGAVVLLRKEN
EASGRLLVERTLHGPGLASSFGYDLAVVDLNGDGWQDIVVGAPQFYMKDRDIGGAVYVYI
NQAGRWERVTPVRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYDDGGAGKVYIYHGS
AQGIKSSPAQILSGKPHNMKLFGYSLAGNMDLDSNSYPDLAVGSLSDTALIYRARPVISI
RRAVKISPQEIDLTIKTCGNSICFTVDACFSYTANPSSYNPRLIIGYTVEADGERRKQGL
PSRVTFLNKSRTDTDHQFNATMDLRGQKQETCTKIIVTLKDNIKDKMRSVPIEVSAQIVD
TKRRQTRNNLPKLLPILDSSQPSKDVIEVNFVKEGCGRDHICRSKLKMEYKLFYKQNNLD
MYSPLPMKNNVPQFHLNYERKDLALRVTVNNVNGDDAYEAKLVGAFPETLSYSGVRSHQP
TMEKPILCTANQNGSQADCELGNPFKRDSRTSFYIILSTVGMTLDTTEINVDLQLHTTSV
QENIVPVRVKAKVIIELPLSVSGEASPNQVSFGGVVKGESAMKTEEEIGSSINYMFRINN
LWKSSVKASLRIQWPKYNKDGKWLLYLVKITSTGPQDITCSPESEISSLKHIKESSASRT
KREIGERKTVVKMSPLSGKSKVLSCDSEIKCVVLKCPLEGLDGTTVELRSRLWNSTFIED
YASLSHVRIVVKASLVLYTQAKNMILRTPDTNVTVTVSPDSAVAQHSGVPWWIILVAVLA
GILILALLVFLLWKCGFFKRATKDEYDAAYHKAEIHVQPSDKDKLSAEA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcagggaggactttctgctgcttctgtcgcacttttattttatttttcttct
ctggagcaagttttggtactcgccttcaaccttgacaccagtcatgtcatcaggaaagac
ggggaaccgggaagtctgttcgggttctctctcgccatgcaccggcagctcaacccggat
aaaagaatgctgttgatcggagcacccagagctcgagctttgggaaaacagacagccaac
atcacaggaggcctttataaatgtgaaatcacccagaccactgactgtgagcgcattgta
tttgataatgaagagaacgtccgaattgagaacaaggagaatcagtggatgggggtgacg
gttcagagccaggggcctggaggaaagattgtgacctgtgctcatcgctaccagaggcgc
ttgtttgtgaacacgcctcaggagtcccgggacatcaccgggcgctgttacgtcctgagt
caggacctgaccatcgacacggcctccgacgaggacggaggtaactggaacttctgtgag
ggcagagcacgaggccatgagatgtttggatcttgccagcagggtttggctgctactttc
accaaggactaccattacgtggtgtttggagcaccaggagcctacaactggaaaggcatt
gtacgagtggagcagaagaacaacactctgctggagatgggcgtgtatgatgacggcccg
tatgaggttggagatgagcatctcttgaacccggagctggtgcctctacctgctaacagc
taccttggattttccctcgattcggggcacaatatcatgaggagtcgtggcctgacggtg
gtggctggagcacccagagccaatcacagtggagccgtggtcctgctgaggaaagaaaac
gaagcctccggcagactgctggtggagcgcactctgcatgggccgggacttgcgtcctcg
tttgggtacgacctggccgtggttgacctgaatggtgatggatggcaagacatagtcgta
ggagcccctcagttctacatgaaggacagagacattggaggagctgtttacgtctacatc
aaccaggcggggaggtgggaaagagtcactcctgtccgtctgaacgggaccaaagactca
atgtttggactggcagtggagaacattggagacatcaatcaagactcatatcaagacatt
gctgttggagctccatatgatgacggcggtgcaggaaaagtctacatttatcatggctca
gctcaaggaatcaaaagcagccctgcacagatcctttcaggaaagccgcacaacatgaaa
ctctttggatattccctggcaggaaacatggacttggacagtaattcttaccccgacttg
gcagtgggctctctgtcggacacagctctaatctacagggcacggccagtcatcagcatc
aggagagccgtcaaaatatctccacaggaaattgacctcactataaagacctgtggtaac
agcatctgcttcaccgtggacgcctgcttcagctacacagcaaacccctcatcttacaac
ccaagactcataatcggctacactgtcgaggcggacggggagcgcaggaaacaggggctt
ccctccagagtgacgttcctgaacaaatcccgcacagacacagaccaccagtttaatgcc
accatggacctccgcggccaaaaacaggaaacgtgcactaagataatagtcacactgaag
gacaatattaaggacaagatgcgaagcgttcccatcgaggtgtctgcacaaattgtggac
actaaacgaagacagacgaggaacaacctccctaagcttctgcccatattagactcctct
cagccgagcaaagacgtcatagaggttaactttgtaaaagagggatgtgggagagatcac
atctgcaggagcaaactgaagatggagtacaaattattctacaaacagaacaacctggac
atgtactccccgttacccatgaagaacaacgtcccgcagtttcatctgaattacgagagg
aaggacttggctctgcgggtgacggtcaacaacgtgaatggagacgatgcttacgaggcg
aagctggtgggggctttcccagagacgctgtcatactctggagtgcgatcacatcaacca
acgatggaaaagccgatcctctgcaccgccaaccagaatggctctcaggccgactgcgag
ctggggaatccttttaagagagactcacggacttccttttacatcatcctgagcactgtg
ggcatgacgctcgacacaacggagatcaacgtcgacctgcagctccacacgacaagcgtg
caagaaaatattgttcctgttagagtaaaggcgaaagttataatcgaattgccgttgtct
gtcagtggggaggccagccctaatcaggtgtcttttggaggtgttgtaaaaggtgaaagt
gccatgaagacagaggaagagatcgggagttcgattaactatatgttcagaattaacaac
ttgtggaagtcttcagtcaaagcctcacttcgcatccagtggcccaaatataacaaagat
gggaaatggcttctttacctggttaagatcacatctacaggaccgcaggacatcacatgc
tctcctgagtctgagatcagctctctcaaacacattaaggagtcgtcggcctccaggaca
aaacgtgaaattggagaaagaaaaactgtcgtcaaaatgtctccactgtccggcaaaagt
aaagtcctgagctgcgacagtgagatcaaatgtgtggtgctcaagtgcccccttgagggc
ctggacggtacaacagttgaactgagatctcgtctttggaactcgacctttattgaggac
tacgcctctctttcacacgtgcgtattgttgtgaaggcctcgctcgtcctctacactcag
gctaaaaacatgatcctgagaactcctgacacaaacgtgacagtgacggtgtccccagac
agtgcagtagcgcagcacagcggagttccctggtggatcatactggtggctgttctcgca
ggcatcttgattttggctttgttggtgtttctgctgtggaagtgtggtttcttcaagaga
gcaacaaaagacgaatatgatgctgcgtatcacaaggcagagatccatgttcagccctct
gacaaagacaaactctctgctgaggcctga
DBGET
integrated database retrieval system
