KEGG   Semicossyphus pulcher (California sheephead): 138592837
Entry
138592837         CDS       T10596                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04137  Mitophagy - animal
spul04144  Endocytosis
spul04145  Phagosome
spul04148  Efferocytosis
spul05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:spul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    138592837 (rab5b)
   04145 Phagosome
    138592837 (rab5b)
   04137 Mitophagy - animal
    138592837 (rab5b)
   04148 Efferocytosis
    138592837 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    138592837 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spul04131]
    138592837 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spul04147]
    138592837 (rab5b)
   04031 GTP-binding proteins [BR:spul04031]
    138592837 (rab5b)
Membrane trafficking [BR:spul04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    138592837 (rab5b)
 Endosome - Lysosome transport
    138592837 (rab5b)
Exosome [BR:spul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138592837 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   138592837 (rab5b)
  Exosomal proteins of colorectal cancer cells
   138592837 (rab5b)
  Exosomal proteins of melanoma cells
   138592837 (rab5b)
GTP-binding proteins [BR:spul04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    138592837 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 B12-binding Tfb2_C
Other DBs
NCBI-GeneID: 138592837
NCBI-ProteinID: XP_069519821
LinkDB
Position
Unknown
AA seq 216 aa
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSSRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgctccaacggcacgctaccacagaccaagatctgc
cagttcaaactggtgctcctgggtgacatggctgtgggcaagtccagcctggtgctgcga
ttcgtcaagggacagtttgacgagttccaggagacgactataggagctgcgttcctggct
cagtcggtgtgtctcgatgacaccacggtgaagtttgagatctgggacactgcaggacaa
gagcgataccacagcctggctccgatgtactaccgcggcgctcaggctgctatcgttgtc
tttgacatcaccaagccggagacgtttgagcgagccaaggcctgggtgaaggagctgcag
aggcaggccagccccaacattgtgatcgccctggctgggaacaaggctgacctggcagag
aggagactagtagaatacgaggaagcgcagacgtatgctgaagacaccggcttgctcttt
atggagacctctgccaaaacagccatgaacgtcaacgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccagaaccccacacatgcggcgcgacaccggggcgtcaac
ctccaggatccagacgcccactccagccgagcctgctgtggaggaaactag

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