Semicossyphus pulcher (California sheephead): 138592856
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Entry
138592856 CDS
T10596
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
spul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138592856 (upf3a)
03015 mRNA surveillance pathway
138592856 (upf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138592856 (upf3a)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138592856 (upf3a)
mRNA cycle factors
P-body specific factors
138592856 (upf3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
PagP
Motif
Other DBs
NCBI-GeneID:
138592856
NCBI-ProteinID:
XP_069519842
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MRSEKDQMTVGKEKSVVEIQFRDLPREQENIPGNNKQKEEKKEVFTKVVIRRLPPNLSKE
LLEEQLSPLPSYDYFEFFPADQSLYPHLFSRAYINFKNPEDILLFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKIEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSDKDIKIKLLKKSDRDDDVDSDRMKDKSDIGETDRGKWEKTGGQKSKD
PKEKGQPESDKEQREQHGRRQRDKDHRGKDEERKRQRHHYEFDKFMRRKDETKWGKGYCQ
DRAKKDGHHHGYSYCPDSGDKLGKEDRDELGNRKERLRNKVSEKDRPAMQLYQPGARNRK
RMSSAGKGYDCIPAGLSPEPGAEHCFDVVALATGLEKGFEKSKDEQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggaccaaatgaccgtggggaaggagaagagcgtcgtcgagatacag
ttcagagacctcccaagagagcaggaaaacatccccggtaacaacaagcaaaaggaagag
aagaaagaggtttttacgaaggtggtgattcgacggcttccgccaaacctgtcaaaagag
ctgctggaggaacagctcagtccgctcccatcctacgactattttgagttctttccagcg
gatcaaagtctttatccccacctgttctccagagcgtatatcaattttaaaaaccctgaa
gacatcctgctgtttagggaccgatttgatggctatgtcttcatcgacaacaagggacaa
gaatatcctgcagtggtggagtttgccccctttcagaaaatatccaagaagaagctgaag
aagaaagatgccaaagccgggagcatcgaagaagacccagaatacaggcggttcttggag
aattactcctgtgatgaagagaagtctatggccaaccctgagactctgctgggagagata
gaggccaagaccagagagctcatagccaaacggacaacaccgctgttggagtacatcaaa
aacaaaaaaatagagaaacagagaataagagaggagaagagagaggagagaagaagaagg
gagctggagaagaaacgtcaaagggaggaggagaagagaaagcgtcgagaggaggagaga
cgcaagcggaaagaggcagagaagcagaagaagttgtctgataaagacattaaaattaag
ctcctgaagaagagtgacagggacgatgacgtggattcagaccgaatgaaggacaaaagt
gatatcggggagacagacagaggaaaatgggagaaaactggaggacaaaagtcaaaggac
ccgaaagaaaaagggcagcctgagagcgacaaggagcagagagagcagcacggccgcaga
cagagagacaaggatcaccgcgggaaagacgaggagaggaagcgacagaggcaccactac
gagtttgataagttcatgcggcgcaaagacgagaccaaatgggggaagggctactgccag
gaccgggccaagaaagatggccaccatcatggctactcgtactgcccggacagcggagac
aagctggggaaagaggatagggatgagctgggtaacaggaaggaacgcctccgaaacaag
gtgagcgagaaggaccgcccggccatgcagctctaccagccgggcgcccgcaacaggaag
cgcatgagctcagcaggcaaaggctacgactgcatccccgcgggcctctcacctgaaccc
ggggccgagcactgttttgatgtggtcgctctggcaacagggctggagaaggggtttgag
aaaagcaaagatgaacagtaa
DBGET
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