| Entry |
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| Symbol |
tnrc6ba
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| Name |
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
spul Semicossyphus pulcher (California sheephead)
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| Brite |
KEGG Orthology (KO) [BR:spul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:spul03019]
138593045 (tnrc6ba)
03036 Chromosome and associated proteins [BR:spul03036]
138593045 (tnrc6ba)
Messenger RNA biogenesis [BR:spul03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138593045 (tnrc6ba)
Chromosome and associated proteins [BR:spul03036]
Eukaryotic type
Gene silencing
piRNA pathway
138593045 (tnrc6ba)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
2115 aa
MEDKKRKKDDKRKREASQKVTEQKNKVPDLSKPASAQSPATQSSSASPSPGPTPSASPSP
ATLGPGSAANPSQGGNNAKRLAVANGQPTSNTISSSTAGGPGAAGNSSTSSGGGAQAAQQ
QPRYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGGGTGGGGGDGPNANMAAVSDS
GAAASLLALTSSSVAASTTTSNYANSMWGTSSGSQASSQGREKVIVDGNNLEEWPSIAGS
DGGGASFAGAGGGSSNIGMPVNSISASGNQSSPTSSFSLPNECMQSSNGVAWGMAASQGH
LGGGNAVAAAGPLLQQPASLSKASTVPGSHDASGPVDGSSGITGANFSPNANPSAWPALV
QQDGPAAAGEGGPSSFHHQGPGGSLSANSSASLGLGGGAVGVLGGHPPLSVNQSSPHQRQ
LHQMQSRDREIGGKWDTESAGPKIVGGEGIGGGMDRSVGGGEMSVGDHSLVSSWRGQPSF
PAANSKTGASRTDGWEGLGGGTGGFGAAEGDNGTSGWGYPKSTSGVSAWGSAGTGGNSGQ
TSGVSQGGWGPSGVGGERGVSGGDWGGSSTGIGGANPGGEGMGGACSSNSSSSGGSTAGN
PPAASSSSSTVTTMTRAWDNQKGEGETGEWGGGVDGQGAQGGSSSSGGNSRSGSGSSHSQ
PRRPAPNAEAALQNLLSRSDLDPRVLSNTGWGQTQIRQNTAWEFEEHGGQRKGGSSSATS
KQPSSLGGSSQYSGGPRTQINDSLGPGVSPSLVPSAGSSGEGWESSSNSSSSGASLSGRA
PPPSGPNMRNLGVSQSGPVTTAGPGIGSGVIPGHSQQGKATGWGGGGMGAGEGQESKGWG
TEEWRDSSRGGNGGGWGDHGQQSEPVSGGWGGSQEEKGTGWKEMGGTGGGSGWGSGQKVG
SGRDWGEQQSKSNSGGGGGWEDERKNGGNSGGDSGGGGWGSWDDGAPRRTWGAGGTGGGG
SGGGGVGVVGGMGSKPNQSWSGGNKMHQMPNSQAGSITGPQAQLQQQQSQPRNQHPQRQQ
TLDQGAMQGGGGRKPISQAQNQNQSSGWTSGPIPGGSGGSGIGSEPSGWEEPSPQSISRK
NEIDDGTSAWGDPTHYNYKPVNLWDKNSAPAGQQPHGQGQGQAQQQQQQQQQQQQQQQQQ
QQQQQGPPIQQQPSRQAAGIGGSRDFNTGHGPAKTSAIGPSGWGGASPTSPTVDNGTAAW
GKHNEVPTGWGDPDDAGGKAPGWGNPSPNPIKTGSKSMQDGWGDKESSVAASRHSSWEDE
EEGGGMWNSTGSQGSGSSWGQGSNGGWGQSQAGKKPSNKGPMKPSGDSWMSPINRQFSNM
GLLSDDPSGPNMDLAPGSLQEKKIDVEKRGMVMNDYNGDLRKGGRGGGGMAYRPPGSKEA
LPGDAGSYYDKGGHSIFGSGGGMAQSRHQPSVPPLNQSPGIRAQVPHQFLSPQVPGSVLK
QMPPPSGSVGGVGSVGGVAGLGGGVFPPQLSPQHIAMLSSIYPPHIQFQLACQLLLQQQP
QQQQPQQLLQNQRKFTPNVRQQADPQQLARIMAVLQQQRQQQQVGGLGGSSKLSPSHHGG
GGMGGPKLPGADPLPHPGLAGTMADLHQKTLGPYSGFSSGVNLPGLDLGGSVVGGPGGMK
DLGGQKSRFKWMMEGHSSPDASSPENAFHKNGPVTPMKMPGGSPYSQYDMMVGDGLSDNW
HRTPGNKMGTKPTTTPSWPPEFQPGVPWKGIDRVDPESDPYMTPGSMMGNAVSPNLNDTE
HQLLQDNTDSTPPLNTLLPSPGAWPYSASDSPLNNAHNSGNLPSLLNSTAKYTDYKTSWP
PEPIGHKSWKANRGSSQTQLSRPPPGLASQKQPSPSPWSGGAPRLAGRSWGGGSSTTAST
WSDGSSRESCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGTALIRYSSKQEAAK
AQSALHMCVLGNTTILAEFVSEEDVARYIAHSQAGGAGSSGSTTGSAGSGPTAASAVGAN
GNGGNCDRVGAGGSSVGGGVEGSSVAGGAGSGGAGHSSSGWQSLDSTGSSSDQPATQGSG
LGIFAQWSSNGAGVGGAGGVEAGRQGLWGGMGGMSGAGYPSSSLWGSPALDDCHQMGSPA
SLLPGDLLGGGADSI |
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| NT seq |
6348 nt +upstreamnt +downstreamnt
atggaagacaagaaaaggaaaaaagacgacaaaaggaaaagggaagcctctcagaaggtc
acagaacaaaaaaacaaagtgccagacttgtctaagccagcgtctgcccagtctcctgcc
actcagagcagctctgcctcccccagccctggacccaccccctctgcctccccatcccca
gccaccttgggccctggcagtgctgccaacccttcacagggcggcaacaatgccaagcgc
ctggcggtggccaacggacagcccacctccaacaccatttcttcctccaccgctggcggc
cccggtgctgctggaaacagcagtacaagtagcggaggcggagcccaggcggctcagcag
caaccgcgctacatgccgagagaagtgccgccacgattccgctgccagcaggaccataaa
gtgctactgaagaggggtcagccgccactgtcctccatgctgctgggaggaggaggagga
ggaacaggaggaggaggtggggatggccccaatgcaaacatggctgctgtctcagattct
ggtgcagctgcctccttattggccctcacctcatcatcagttgctgcttctactactact
tctaattatgcaaattccatgtgggggacaagctcaggcagccaggcctcctctcagggc
agggagaaggtgattgtcgatggcaacaacctggaggagtggcctagcatcgccggcagt
gatgggggaggagcttctttcgctggggctggaggaggcagcagcaacatcggaatgcct
gtgaacagcatcagtgcctctggcaaccaatcctcacccacttcctcattctctttgccc
aatgaatgtatgcagtcgtccaacggtgtggcgtgggggatggctgcttcccagggtcat
cttggaggagggaatgcagtagctgcagctgggcctctgctccaacagcccgcctcactt
tccaaagcctccactgtgccaggaagccatgatgccagtggccccgtcgacggcagcagt
ggtattacaggtgccaacttcagtccaaatgccaacccttcggcctggcctgccttggtg
cagcaggacgggcccgctgctgcaggggaaggaggtccgtcttccttccatcaccaaggc
cctggagggtctttgtctgccaacagctctgcttccctgggcctgggaggtggggcagtc
ggggtgctggggggtcacccacctttatctgtgaatcaatcaagcccccatcagcgccaa
cttcaccaaatgcaatccagagacagagagattggagggaagtgggacaccgaatcagcg
ggaccaaaaattgtagggggggaaggcattgggggaggaatggaccgtagtgtgggagga
ggcgagatgagtgtgggagaccacagccttgtctcctcatggagaggccagccttctttc
cctgcagctaactccaaaacgggtgcctcaaggactgatggttgggagggtttaggaggt
ggaacagggggcttcggagctgctgaaggggataatgggacctcgggttggggatatcca
aagtccactagtggggttagtgcttggggcagtgctggaactgggggaaacagtggtcaa
acctccggggtatctcagggagggtgggggccatcaggagtaggaggggagagaggggtt
tctggtggtgactggggtggtagctccactggtattggtggagctaatcctggaggtgag
ggaatgggtggagcttgcagcagtaacagcagcagtagtgggggcagcacagctggcaac
ccccctgccgcctcctcctcttcatcaaccgtcactactatgaccagagcctgggacaat
cagaagggagagggtgaaacaggggaatggggtgggggagtagatggacagggagcacag
ggaggatcttcatcaagtggtggaaattccaggagcgggagcggcagcagtcacagtcaa
cctcgccgcccagcacctaatgctgaagctgccttacagaacctgctcagccggtctgat
ctggaccctcgggttctgtctaacacaggctggggccaaacacaaatcagacaaaacaca
gcctgggaatttgaagaacatggaggacagcgtaaagggggatcgtcatcagctacatca
aaacaaccatcttctcttggtggttcttctcagtattctggtggacctaggacccaaatc
aatgattctctgggtccaggggtcagtccttccctggttccatctgctgggtcctccgga
gagggctgggagagcagcagcaacagtagcagtagtggggcctctctgtccgggagagcc
ccaccaccttcagggcccaacatgcggaatcttggcgtctcacaatctgggccagtgacc
acagcagggcctggtatagggtctggggtaattcctggtcacagccagcaggggaaagct
acaggatggggtggaggagggatgggggctggggagggccaggagtccaagggttggggt
actgaggaatggagagacagtagtagaggaggaaatggaggaggatggggagatcatggt
cagcagagtgaaccagtgagtggaggttggggaggaagccaggaggagaaagggacaggg
tggaaagaaatgggagggactggaggaggaagtgggtggggatcaggacagaaggttggg
tcaggtagggactggggagagcaacagtccaaatcaaatagtggaggaggaggaggatgg
gaagatgagaggaagaatggaggaaactcaggtggggattcaggtgggggtggttgggga
agttgggatgatggtgctccccggagaacctggggagcagggggcacaggtggaggaggg
agtggaggagggggggtgggtgttgttgggggcatggggtccaaacccaatcaaagttgg
agtggaggaaacaaaatgcaccaaatgccaaacagccaggcgggctccatcacaggcccg
caggcacaactgcaacagcaacaatcacagccccgcaatcagcatccacagcgacagcaa
acgttggaccaaggggctatgcaagggggtggcgggaggaaaccgatctctcaagcccag
aatcagaaccaaagctcaggctggacctcggggcctatccctggtggttctggaggaagt
ggaattggatctgaaccaagcggttgggaggaaccctcgccacagtctataagcaggaag
aacgagatagacgatggaacatcagcatggggagacccaacccattacaactacaagccg
gtcaacctgtgggacaagaacagcgcccctgctggccagcagccacatggccagggccag
ggtcaggctcagcagcagcagcagcagcaacaacaacaacaacagcaacagcaacaacaa
caacaacaacagcagggacctccaatacagcagcagcctagcaggcaggctgcagggatt
ggaggtagcagagacttcaacactggccatggaccggcaaaaacttcagctatcggtcca
tcaggttggggtggtgcttctccaactagtcctacagtagacaatggcacggcagcttgg
ggaaagcataatgaagtccctactggctggggagatcctgatgatgctggagggaaggca
ccgggctggggaaacccttctcccaaccccatcaaaactggttcaaagtctatgcaagat
ggctggggtgacaaagagagctctgttgctgcgtcgcgtcactcaagttgggaggatgag
gaggagggaggcggcatgtggaacagcaccggctcccaaggaagtggctcgtcttgggga
cagggaagcaacgggggctggggacagagtcaggccgggaagaagcccagcaacaagggt
ccaatgaagcctagcggagactcatggatgagccccatcaacagacagttctctaacatg
ggactgctgagtgatgatcccagcggcccaaacatggacctggctccgggttctctccag
gagaaaaagatcgacgtggagaaaagaggcatggtgatgaatgattacaatggagatctg
agaaagggaggaagaggaggaggggggatggcttatcgtccccctggttccaaagaggct
ttacctggggatgctgggtcttactatgacaagggcggtcacagtatctttggcagtggt
ggagggatggctcagtcaagacaccagccaagtgtcccaccattaaaccagtccccaggg
atacgagcgcaagtgcctcatcagttcctgtcacctcaggtgccaggctcagtgctgaag
cagatgccccctcccagcgggagcgtggggggtgtcggcagcgtgggaggggtggcagga
ttggggggaggtgtgttccctccacagctgtccccccagcatattgccatgctcagcagc
atctaccctccacacatccagtttcagctggcttgtcagctcctcctccagcagcagccg
cagcagcagcagccacaacagctcctgcagaaccagaggaagttcacaccaaatgtacgg
cagcaggctgaccctcagcagttggccaggatcatggcggtgctccagcagcagaggcag
cagcagcaggtcggaggtttaggcggcagctccaaactctccccctcccaccatggtgga
ggtggcatggggggtcccaaactgccgggggctgatcccctgccgcatccaggcctggca
ggaactatggctgacttgcaccagaaaaccctcggaccatactctggattcagttctggg
gtgaacctccctggtctggacctgggcggctctgtggtggggggtcctggcggcatgaag
gacctcggaggtcagaagtccagattcaaatggatgatggagggacactcttctcctgac
gcctcctcacctgagaacgcattccacaaaaatggtcccgtcacccccatgaagatgccg
ggcggctcgccctactctcagtacgacatgatggttggagacgggctaagtgacaactgg
catcgcacccctggcaacaagatgggaaccaaacccaccaccacacccagctggccccct
gagttccagcctggcgttccctggaagggaatcgaccgtgtcgacccggaatctgacccc
tacatgaccccagggagcatgatgggaaacgcagtgtcccccaacctcaatgatactgag
caccagttgttacaagataatactgattccacccctcccctcaacaccttgctgccttca
cctggtgcctggccctacagtgcctcagacagtcccctcaacaacgcacacaactcagga
aacttaccttcccttttgaactctacagcaaagtacacagactacaagaccagctggccc
ccagaacccatcggacacaagtcctggaaagccaaccgtggcagcagccagacccagctg
tcccgcccacctccaggactagccagtcaaaagcagccgtcgccttccccctggtctgga
ggagcccctcgattggctggacggagctggggcggaggctcgagcactaccgcctcgacc
tggagtgacggcagctctcgggaaagctgttggttggtgctcagcaacctcacaccacag
attgatggctctaccctgaggaccatctgcatgcagcacggccctctgctaacctttcac
cttggcttgacccagggcaccgctctgattcgctacagctccaaacaggaggcagccaag
gcccagagtgcactccacatgtgtgttctgggtaacaccaccatcttggcggagtttgtt
agcgaggaggatgtggctcgctacattgcacattcccaagcaggaggagcagggagctct
ggatccacaaccggctctgcaggctctgggcctacggcagcctccgcggtgggggctaac
ggcaacggaggaaactgtgacagagtcggagcaggaggcagcagcgtgggaggaggagta
gaaggaagctccgtagctggaggagcaggaagtggaggagctgggcattccagctctggg
tggcagagtctggacagcacaggcagctcatcggaccagcctgccacccaggggtccggg
ttgggtatctttgcccagtggagcagcaatggggctggggtgggtggtgctggaggtgtg
gaggccggaaggcaaggtctgtgggggggcatgggcgggatgagcggggcggggtacccc
agcagtagcctctggggttccccggcacttgatgattgtcaccagatgggaagtcccgcc
tcacttctgccaggggacctgctgggagggggtgccgactccatctga |
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