Semicossyphus pulcher (California sheephead): 138593125
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Entry
138593125 CDS
T10596
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138593125
Spliceosome [BR:
spul03041
]
Complex C
Other components
Step II factors
138593125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
138593125
NCBI-ProteinID:
XP_069520087
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MADVGVDELSQLEYLSLVSKVCTELDNHLGISDKDLAEFVIDLAEKQPAFDGFKALLLQN
GAEFTDSLISNLLRLIQTMRPPSKTSSSKASEASVKPKSEKEKLKELFPALCRANDPAPK
RLLDEDDVKVAADAMKELEMFMPSVSGTESKSSKSRSEKSRRHSRSRSRSRERDRHRDRD
RDRDRDRDRKRRHRSRSRSRSRSRSRDRDRHRDRERERDRDRDRDRDRDRGKRSGKSSRW
SERSPSPRKDQDKDSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRW
EGLVHISELRREGRVANVADVVSKGQRVKIKVLSFTGSKTSLSMKDVDQETGEDLNPNRR
RNVGPDGGEEISMRNPDRPSNLNLGHAPELEQDDTLERKRLTKISDPEKWEIKQMIAANV
LSKEEFPDFDDETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDG
SLSQAAMMQSALAKERRELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGM
MPNDIPEWKKHAFGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGET
GSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFED
CTSPETVIKYMTDGMLLRECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTD
MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLT
EPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPP
GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR
AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPP
METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS
MLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQAR
SLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQ
QVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFSPAFFKVSDPTRLS
KQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgttggagttgacgagctttcgcagcttgagtatttgtctttggtgtccaag
gtctgcacggagcttgacaaccatctgggaataagtgacaaagatttagctgaatttgta
atcgaccttgctgaaaaacagccggcctttgatggattcaaagctcttttgcttcaaaat
ggggccgaattcacagattccctcatcagtaatttgctcaggctcattcagactatgcga
cctccatccaagacttcttccagcaaagcctctgaggcttcggtcaagcccaagtcagag
aaggagaagttgaaggagctgtttcctgcgctgtgcagagcaaacgatccagcaccaaag
aggctactagatgaagatgatgtgaaagtagcagctgatgccatgaaagagctggagatg
tttatgcccagtgtcagtgggacagaatccaaaagcagcaaaagcaggtcagaaaagagc
agacgccacagccgaagtcgcagccgaagcagagaaagagacagacacagggaccgcgac
cgtgacagagatcgggacagggacaggaagagacggcatcgctctcgttcccgctccagg
tccaggtctcgatccagagatcgtgataggcacagagatagagaaagagaaagggacagg
gacagggacagagacagagacagagatcgtggcaaaaggagtggcaagtcttcccgctgg
tctgagcgctcacccagtcctagaaaagatcaagacaaagactctgaccgctggaaggac
aaacatgtggaccgccccccaccggaggagccttctgttggtgacatctacaacggcaaa
gtcaccagtatcatgcagtttggatgctttgttcagctggagggattaaggaaacgatgg
gagggcttggtccacatttctgagctgcgtagagaaggccgggtggccaacgtggctgat
gttgtcagcaaaggtcagagggtcaagatcaaggtgctctcattcactggctcaaagacc
agcctcagtatgaaggacgttgaccaggagacgggagaagacctgaaccccaacaggagg
aggaacgtaggcccagacggaggggaggagatctccatgaggaaccctgaccggccgagt
aacctgaacctgggccacgcacctgagctggagcaggacgacacgctggagcgcaagagg
ctcaccaaaatttctgacccggagaagtgggagatcaaacagatgattgctgccaacgtt
ttgtcaaaagaagagttccctgattttgatgatgagacgggaatccttccaaaagttgat
gatgaagaggatgaggatttggaaatcgagctggttgaggaggaacccccgttcctgagg
ggacacaccaagcaaagcatggacatgagccccgtcaagattgtcaagaatccagatggc
tccctgtctcaagcagccatgatgcagagcgctctggccaaggagaggcgagagctgaag
caggcagcacgagaggcagagatggactccatccccatggggctcaataaacactgggtt
gacccgctgccagatgctgatggcaggcagattgcagccaacatgagaggcattggcatg
atgcccaacgacatcccagagtggaagaagcacgcttttggaggcaacaaggcctcttac
ggaaagaagacccagctctccatcctggagcagagggagagtctgcccatctacaagctg
aaggagcagctcattcaggctgtacatgataaccagatcctgattgtaatcggagagacg
gggtccggtaagaccacacagatcactcagtacctggccgaggcaggttacaccaccaga
ggaaagatcggctgcacgcagcctcgtcgtgtggccgccatgtctgtggccaagagagtc
tctgaggagtacggttgctgtcttggacaagaggttggttacacgatccgttttgaggac
tgcaccagccctgagacggtgatcaagtacatgacagacggtatgctgctgagagagtgc
ctgatcgactctgaactgggccagtacgccatcatcatgttggacgaggcccacgagagg
acgatccacactgatgttctctttggtttactcaagaagactgtacagaagcgcacagac
atgaagctgatcgtaacctcagctacgctggacgccgtgaagttctctcagtacttttat
gaagcgcccatcttcaccatcccgggaagaacgtatccagttgaggttctctacaccaaa
gaacccgagacagactacctggatgccagtctcatcaccgtcatgcagatccatctgacc
gagcctccaggtgacatcctggtgtttctgaccggacaggaagagatcgacacggcttgt
gagatcctgtacgagaggatgaagtcgctgggcccggatgttcccgagctgatcattctg
cctgtttactctgctctgcccagtgagatgcagaccaggatctttgaccctgcaccccca
ggcagcagaaaggtggtcattgctaccaacattgcagagacatctctgaccatcgatgga
atctactacgtcgttgatcctggctttgtcaagcagaaagtgtacaactctaagaccggc
attgaccagctggtggtgactcctatctcacaggcccaggccaagcagagggcaggtcga
gccggcagaacaggcccagggaagtgttaccgactctacacggagagagcctacagagac
gagatgctgacgacaaacgtgcctgagatccagagaaccaacttggccagcactgtgctg
tctctgaaggccatgggcatcaacgacctcctttcgtttgacttcatggacgctcctccc
atggagactctgatcacggccatggagcagctctacactctgggagctctggatgatgaa
ggcttactcacacggctggggagaaggatggctgagttccctctggagcccatgctgtgt
aagatgttgatcatgtccgtccatctgggctgcagtgaagagatgctcaccatcgtgtcc
atgctgtctgtgcagaacgtcttctacaggcccaaggacaagcaggccctcgctgaccag
aagaaggcaaagtttcaccagcctgagggcgatcacctgaccctgctggcagtctacaac
tcctggaagaacaacaagttctccaacccctggtgttacgagaacttcatccaggcccgc
tcgctgcgcagagcccaggacatccgcaaacagatgctgggaatcatggacagacataag
ctggatgtggtttcttgtggaaaagcaacagtgcgagtccagaaagccatctgcagtggt
ttcttcaggaatgcagccaagaaggatcctcaggagggataccgcacgctgatagaccag
caggtcgtgtacatccacccctccagtgctctgttcaaccggcagccagaatgggttgtg
tatcatgagctggtcctgaccaccaaggagtacatgagggaggtgacgaccattgatcct
cgctggctggtggagttctctcccgccttcttcaaagtgtccgaccccacgcgcctcagc
aagcagaagaaacagcagcgcctggagccgctgtacaaccgctacgaggagcccaacgcc
tggagaatctctcgggccttcaggcggcgttaa
DBGET
integrated database retrieval system
