Semicossyphus pulcher (California sheephead): 138593151
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Entry
138593151 CDS
T10596
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04382
Cornified envelope formation
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
spul04810
Regulation of actin cytoskeleton
spul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138593151 (itgb4)
04518 Integrin signaling
138593151 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138593151 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138593151 (itgb4)
04810 Regulation of actin cytoskeleton
138593151 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138593151 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spul04147
]
138593151 (itgb4)
04515 Cell adhesion molecules [BR:
spul04515
]
138593151 (itgb4)
04090 CD molecules [BR:
spul04090
]
138593151 (itgb4)
Exosome [BR:
spul04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138593151 (itgb4)
Exosomal proteins of bladder cancer cells
138593151 (itgb4)
Cell adhesion molecules [BR:
spul04515
]
Integrins
Integrin beta subunits
138593151 (itgb4)
CD molecules [BR:
spul04090
]
Proteins
138593151 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
I-EGF_1
EGF_2
EGF_integrin
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
I-set
SEA
Motif
Other DBs
NCBI-GeneID:
138593151
NCBI-ProteinID:
XP_069520123
LinkDB
All DBs
Position
Unknown
AA seq
1853 aa
AA seq
DB search
MQIEKNQQINMKLQQSQVSPQLMSMTLLPGEERLVDVEVFAPTKGPLDLYILMDFSNSMA
DDLDNLKNMGQELATLVNNLSNDYTIGFGKFVDKVVEPQTDMRPAKLKQPWHDSDPPFSF
QNVIKLTSDSKFFISELKKENISGNLDAPEGGFDAILQAAVCGDKIGWRPESTHLLVFST
ESAFHYEADGINVLSGILPRNDELCHLDNEGKYTEDINQDYPSIPTLVRLLRKNNIIPIF
AVTNHSITYYQKLQEYFPIAEVGLLQEDSSNIIEVMNTAFKNIRSKMSIHAEEKPKAFAT
QFLTTSGSAAQFGAFNYTPGEIGKFKMLLRAQQEVEEAPVCKIDPKQREGTMRVKPSTFS
AAANVRAAVLCPTCECEKTKIPKAARCHGNGELVCGKCQCYEGWLSTFCNCSASAASQDS
SQCIAPDTTEPCSGRGDCTDCGICVCYNPDQFEGPYCQYDKTQCQRYGGFLCNDRGSCVM
GRCACTEGWSGNACECPKSNQTCRDTKGGVCNGLGKCVCGRCECPNSGIEMTSTCEANYQ
AQLGVCEAMRSCVQCQAWKTGEKKEKKECAKCPVKIVMVDELKEAKDVLDSCSFRDEDDD
CTYHYTVENPKGTTDKGLEAQVLKKKDCPPASLLWLLPLLLFLLLLLALLLLCCWKYCAC
CKTCWQSCLALLPCCRKGRMVGFKEHEYMLRQSLLTSDHLDTPMVRTGPPKGTDVVRWKV
TDNVHRGANHPQALIKPNPKESIQYPISLRLNRLFSENLSRPESRDAEQLRKEVADNLNE
VYKQIPGAQKVQKTSFRMQRNAGRRQEYAIMDTVLPALRGSYSDIVKLTEKNVQSGNLRD
LKVVPGYYTVATDREAAGAIEFQENVESVDVHVPLFVKDEDDDKKQLLLEAVDVPLGIAD
IGKRLVNITIFKEHATSVFSFLQPAYTYSRQDGMANIPITREIIEDGRTQVTYRSRDLTA
KDKKDYLTVEGDLTYNLGETQKIVPVRLLELAEKDGLLDDKQVKQFVMDLSNPRHGAKLG
RYPRTTVTIADQPEPSAIMFKKGTQNFLTSDPTYTIPVVRNRNLDTPATVKWRTKKAQHD
MSGPLKFGPGDTEKNIVIDPKTHPGPIKPESFQLELYDPSNGASIGERKTTIVNVTEGGQ
KPLEFAPLTKGSINKTATSPGGHVLSPANLKAKATGPRSIHLNWDPPAGNPMGYKVKYWI
YGDPEKDAQVLDVKTPQADLTNLYPYCDYEMRVCGYNAMGDGYNTDMVSCQTLEDVPGEP
GRLAFNVISPTVTQVSWAEPAETNGNITAYEVIYTPIDDDMKPVGAAKKVKIDNPKKRML
LIENLQNAQTYQYKVRAKNSVGWGPFRDATINLASQPTRPLSIPIIPDVPIVDAEAGDEY
DSYLMYSNEVLKSPAGSKTPSVSGDDYTMNGKWDQNFLFPGGLGTRNLSASSSPMSTLSS
NYTGAGGTYTTETTTTYLTGPGGSRRQDMIGGGGVHTSEVIMRKRSENRGYTDENIRDSI
VMGDLSSKFQSPGGFGYTGMQSSSQNQFSYSLSQGSRARTPSSDVNEALYNLDRVLQDAR
LSPGVPDTPSRLVFSALGPTALKVSWQEPYCEKDILGYTVLYQQINGGEMKRVDVTNPAE
NSVIIQDLLPNHSYLFKVKAQSQEGWGPEREGVITIESAVDPKSPLSPMPGSPFTLSTPS
APGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLHGGGDVRTFQVNGNSAETSLT
VPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGGAMSQYNMQSMQMSEMSQMPLRT
NDVMLDSLFSDGMMMTTQRTETSGMVTRQVTKEVVQRSVTGGATVTKKMFYES
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagaaaagaatcaacaaatcaacatgaaacttcagcaatcccaagtgtctccg
cagctgatgagcatgaccctcctgccaggagaggagaggctggtggatgtggaagtgttt
gctccgaccaaaggtcctctggacctttatattcttatggacttctccaattccatggct
gacgatttggacaacttaaagaatatgggccaagagctagctacactggtaaataacctg
tcaaatgactacaccattggctttggaaagtttgtggacaaagtggtcgagccacagact
gacatgaggccggccaaacttaagcagccatggcacgacagtgaccctccattctcgttc
caaaatgtcatcaagctgaccagtgactcgaagtttttcataagcgagctcaagaaggaa
aatatatctggcaacttggatgctcctgaaggaggatttgatgccatattacaggctgca
gtttgtggggacaagatcggctggcgacctgaaagcacacatctcctggttttctctact
gagtcagccttccactatgaggctgacggtattaacgtgctttcaggcatcctgccgcgc
aatgacgagctctgccatctggacaatgaaggcaaatacacagaggatataaaccaggat
tacccctcaatacccacactggtccgtctcctacgcaaaaacaacatcattcccatcttt
gcagtcaccaaccactccattacgtactaccagaaactccaagagtacttccctattgct
gaggttggtctgctgcaagaagactcctccaatatcattgaagtcatgaacactgccttt
aagaatattcgttctaagatgagcatccatgcagaggaaaaacccaaggcttttgcaact
cagttcctgaccaccagtggaagcgctgcacaattcggagcctttaattacacgcctgga
gaaataggcaagttcaagatgctgctcagagcccagcaagaggtcgaggaggcgcctgtc
tgtaaaatagatccaaagcagagagagggaacaatgagagtcaaaccatcaacctttagt
gctgccgccaatgttcgggctgcagtgttgtgtccaacctgcgaatgtgaaaagaccaaa
atccctaaggcggccaggtgccatggcaacggagagcttgtgtgtggaaagtgtcagtgc
tatgaaggctggctaagtacattctgtaactgctcggcaagtgctgcatctcaggacagc
agccagtgtatagctcccgacacgacagaaccgtgttcaggccgtggggactgcacagac
tgtggaatctgtgtgtgctacaacccagatcagtttgaaggaccctactgtcagtatgat
aaaacccagtgtcaacgatatggaggattcctctgcaacgaccgtggctcttgcgttatg
ggtcgctgtgcatgtacagaaggctggtcgggcaatgcttgtgaatgtcccaagagcaac
caaacctgtcgggacactaaaggcggtgtttgcaatgggctgggtaaatgtgtatgtggc
cgctgtgagtgtccaaattctgggattgagatgacttcaacctgtgaggcaaattaccag
gcccagctgggggtgtgtgaagctatgaggagttgtgtccagtgtcaggcctggaagact
ggagaaaagaaagagaagaaggagtgtgctaagtgccccgtcaaaattgtcatggtggac
gaactcaaagaagcgaaggacgtgcttgattcttgcagtttccgtgatgaggatgacgac
tgtacgtatcactacacagttgaaaaccctaaaggaacgacagataaaggtttggaggct
caggtgctcaaaaagaaagattgtccccctgctagcctactgtggctgctcccactcctc
ttgttcctcttgttactgttggcacttttgctgctctgctgttggaaatactgcgcctgc
tgcaaaacctgctggcagagctgtcttgccctgctgccttgctgtagaaaaggtcgcatg
gttggcttcaaggaacatgagtatatgctacgccagtctctgctcacctcagaccatctg
gacacaccaatggtgaggaccggcccgcccaagggaacagatgtggttcgctggaaggtc
actgataatgtgcaccgaggagccaatcacccccaggctctgataaagcccaaccctaag
gagagcatccagtaccctatctcactccggctaaacaggttgttttctgagaacctctct
cgccccgaatccagagacgcagaacagctccgtaaggaagtggccgataacctaaatgaa
gtgtacaagcaaattcctggtgcacagaaggtgcaaaagacctcattcagaatgcagaga
aatgccggacggaggcaggaatacgccatcatggacactgtcttgccagctcttcgcggc
agctactctgatattgtcaaactcacagagaaaaatgtccagtctggaaacttacgtgac
ctgaaagtggtgcccggctactacactgtggctacagatagagaggctgctggagccata
gaattccaagaaaatgtggagtcagtagatgttcatgtgccgctcttcgtcaaggatgaa
gatgatgacaagaaacagctgctgctggaggccgtggatgtcccactgggtattgccgac
attggaaaacgtttggtcaacatcacaatcttcaaagaacatgccaccagtgttttctcg
ttccttcaaccggcctacacttacagcaggcaggacgggatggccaacatcccaatcacc
agagagatcatagaagatggacgcacacaggtcacctatcgcagccgagatctcacagcc
aaggataagaaagactacttgactgtggaaggagacctgacttataatcttggtgagacc
caaaaaatagtgcctgttcgtctgctggagctggcagagaaagatggcctcctggatgac
aaacaggtcaagcagtttgtcatggatctcagtaacccacggcatggtgccaagctgggg
cgctacccaagaactactgtcactatcgcagatcaaccagaacccagtgcgataatgttc
aaaaagggcacccagaactttttgacatctgacccaacctacaccatccctgtggtccgc
aatcgtaacctggacacccctgccacggtgaaatggcgcaccaagaaggctcagcatgac
atgtcaggcccactaaagtttggtcctggagacacagagaagaacatagtgattgaccca
aagacccacccgggccccatcaagccagagtccttccaactggagctgtatgacccaagt
aatggcgcttctattggagagaggaagaccaccattgtcaatgtcactgagggaggtcaa
aaacctctagaatttgccccattgacgaagggctctataaacaaaacagccacctcccct
ggtggtcacgttctctccccagcaaaccttaaggccaaagccactggaccgagaagcatc
cacctcaactgggacccaccggctggtaaccccatgggctacaaggtcaaatattggatc
tatggcgacccagagaaagatgcccaggtcttagatgtaaagactcctcaagctgatttg
accaacctgtacccttattgtgactatgagatgcgagtgtgcggctacaatgcaatggga
gatggctacaatacagacatggtttcctgtcaaacactggaggatgtgcctggtgaacct
ggacgtctcgcctttaacgtcatcagtccaactgtcactcaggtcagctgggcagagccc
gcagagaccaatggcaacattacagcttatgaagtcatctacacacccattgatgatgac
atgaagccagtgggtgctgctaagaaagtaaagattgacaaccctaagaagcgaatgctg
ttgatcgagaacctccagaatgcccagacctaccaatacaaagtacgagcaaagaacagc
gtaggctggggccccttcagagatgccaccatcaacctggcctcacagcctaccagacct
ctgtccattcccatcattccagatgtccctatcgtggatgcagaggcaggagacgaatat
gacagttacctgatgtacagcaatgaggtgttgaagtccccagcaggctccaagacaccc
agtgtctctggtgatgattacacaatgaatgggaagtgggaccagaacttccttttccca
gggggattagggacacgcaacttgtcagcatcgtcctctcctatgtccactctaagctca
aactacacaggggcaggtggcacttataccacagaaacaaccacaacctacctgaccgga
ccaggaggctctcgcaggcaggatatgattggaggaggaggagttcacacatcagaggtc
atcatgaggaagcgctcagagaacaggggttacacagatgaaaacatcagggactccatc
gttatgggagatttatcaagcaagttccaaagtccaggtgggttcggctacactgggatg
cagagcagctctcagaaccagttcagctacagcctgtctcagggctcgagggcgaggacc
ccgtcttcagacgtcaatgaagccctatataatctggacagggtgctccaggatgcaaga
ctttctccaggtgttccagacactcccagcaggctggtgttctctgctctgggtccaact
gccctcaaagtcagctggcaggagccctactgcgagaaagacatcctgggatacactgtt
ctctaccagcagatcaatggaggtgagatgaaacgtgttgacgtgacaaacccagcagag
aactctgtgatcatccaggacctgcttcccaatcactcttacctatttaaggtaaaggct
cagagccaggagggctggggtccagagagagagggagtcatcaccattgagtccgctgtt
gaccccaagagcccgctcagccccatgccaggctcgccgtttactctgagcactcccagt
gcccccggccccctggtcttcaccgccctgagtcctgattccctgcaactcagctgggag
aaacctcgtaaaccaaacggagacatcctgggctatgttgtcacctgcgaacagctgcac
ggtggaggagatgtgcgtaccttccaggtgaacggcaacagtgctgagaccagtctgacc
gtcccaaacctgactgagaatgttccctacaagtttaaagtccaggctcgaaccacacag
ggcttcggtcctgagagggagggcatcatcaccattgagtctcaggatggaggcgctatg
tctcagtacaacatgcagtcaatgcagatgtcggaaatgtcccaaatgccactgcgaacc
aacgatgtcatgctcgactcattgttctcagatgggatgatgatgaccacacagcgcaca
gagaccagcggcatggtgacccgtcaagtcaccaaggaagtggttcagaggagcgtcaca
ggaggagccaccgtcacaaagaagatgttttatgaatcttaa
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integrated database retrieval system
