Semicossyphus pulcher (California sheephead): 138593218
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Entry
138593218 CDS
T10596
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138593218 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spul03400
]
138593218 (msh2)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138593218 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
138593218
NCBI-ProteinID:
XP_069520224
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRVFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVKDLLLVRQYRVEVYKNHSKSSKEHDWRIEFKA
SPGNLTQFEEILFGGGAGAEGCAGVVAVRFATVADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGNADGSKLREVVQRGGMLVSDRKRAEFSSKDMVQDL
NRLLRAKKGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFGLTSLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVSQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLSKKFHRHTATLQDCYRVYQAVTHIPALVTAL
ERYSGSYQVLLEAGFLSPLRDLQSDFVKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDTLEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKALRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTKNREEYEEAQNAIVKEIINIASGYVDPLQTMSDVIAQ
LDAVASFAVASVSAPVPYVRPTLLEGGCRRMELKQARHPCMETDADTAFIPNDISFVQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVTDSVLARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGCFCLFA
THFHELTALAAQQQSVQNLHVTALTTHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEAAGEKSEQDEEPEAKRRRTEKQVGENLIQDFLDKVKSLPVATMSE
EEVKAALRKMKQELIGKNNTYISEILARCAPAKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaagcagaacttgtccatggacagtgcagctgagcatggctttctt
aacttcattttctccatgccggagaagccggacactactttccgagtatttgaccgcaac
gactactacaccgtgcacggaaaagacgccatattcgctgcgaaggaggttttcaagacg
aacggggtcattaaatatttgggctcagggagtcgcaagctggagagtgtggtcctgagc
aagctgaactttgaggcctttgtgaaagatctgctgctggtgagacagtacagagtggaa
gtgtacaagaaccacagcaagagcagcaaggagcacgactggaggatcgagttcaaggcc
tctccaggaaatttgacccagttcgaggagattctgttcggcggtggagccggagcggag
ggatgtgcaggagtcgtagccgtgcggttcgctaccgtagcagacggacagcgcgtggtc
ggggtcggctacgtggacgctgcccagaggacgatgggcgtgtgcgagttccccgacaac
gagatcttctccaacctggagtccctgctcgtccagatcagccccaaagagtgcctgttg
gcgcagggggaaggcaacgcggacggcagtaaactacgggaggtggtacagcgaggcggc
atgctggtctctgacaggaagagagcagagttcagcagtaaggacatggtgcaggatctc
aacaggctgctgagggcgaagaaaggagagacggtggcgagcaacacgctgcctgagctc
gacaaacaggtggcgatgtcgtgcttggccgccgtggttcgtttcctcgagctgctctcc
gacgagtccaacttcaactcgtttggtctgacctctctggatctgggtcagtacatgagg
ctggacaacgctgctgtgagggctctgaacctcttccagggatcacccgacgacaccagt
ggagctcactcattggccggtctgttgaacaagtgtcgtacgccgcagggtcagcggctc
gtcagccagtggatcaaacaacctctcatggacaaaaccaaaatagaagagaggttggac
ctggtggagagcttcgtgtgcgactcggagctccggcagacctgtcaggaggacttgctg
cgcaggttccccgaccttcaccgtctgtcaaagaagttccaccgtcacactgcgacgctg
caggactgctaccgcgtctaccaggccgtgacccacatccccgccctcgtcacagccctg
gagagatactcaggtagttaccaggttctgctggaggccgggttcctctctcctctcaga
gacctgcagtctgactttgttaagtaccaggagatgattgaaaccacgctggacatgaac
cagattgaccaccatgagttcctggtgaaggcgtcctttgatcccgtgttgagcgagctg
agagagaagatggacacgctggagaagagcatgcaggccgtgctgaacagcgcagccaga
gaactgggtctggatgccgggaagacggtgaagctggagtcaaacgccatgctgggtttt
tacctgagggtcacctgcaaggaggagaaggctctgaggaacaacaagaagttcaccacg
ctggatgtccagaagaacggagtgcgcttcactaacagcaagctgagctccctcaatgag
gagtacacgaagaacagggaggagtacgaggaggcgcagaacgccatcgttaaagagatc
atcaacatcgcctcaggttacgtggatcctctgcagacgatgagcgacgtgatagctcag
ctggacgcggtggcgagcttcgccgtggcgtccgtctccgcccccgtgccgtatgttcga
cccaccttgctggagggcggctgcagacgcatggagctgaagcaggcgaggcatccctgc
atggagacggacgcagacacggccttcatacccaacgacatcagcttcgtccagggggag
aagagcttctacatcataacaggtccaaatatgggcggcaagtcgacatttatccggcag
gtgggcgtgattgctctgatggctcagatcggctgctttgtgccgtgcgagaaggcggag
cttagcgtgactgacagcgtccttgcccgtgtgggagcgggagacagccaggtgaaagga
gtgtccacctttatgtctgagatgctggagacggcggccattctgcgctcggccacggag
aactccctcatcatcatcgacgagctcggcagaggaacgtccacgtacgacggcttcggc
ctggcctgggccatcagcgaacacatcgcctccaaaatcggctgcttctgcctgtttgcc
actcacttccacgagctgacggcgctcgcagcgcagcagcagtctgtccagaacctgcac
gtcacagcgctgactacccacaacacactcaccatgctgtacagggtcaaaccaggtgtg
tgcgatcagagtttcggtatccacgttgccgagctggcctgcttccccccatcggtggtt
gctatggcgaaggagaaggcggaggagctggaggagttccaggaagctgctggagagaag
tcagagcaggacgaggagcccgaggccaagagacgacgcacagagaaacaagtgggtgaa
aacctgatccaggacttcctggataaggtgaagtcacttcctgttgccaccatgagtgaa
gaagaggtgaaggcggcgctccgcaagatgaagcaggagctcatcggcaaaaacaacacg
tacatctcagagatcctcgcgcgctgtgctcctgcaaaaacagcttaa
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integrated database retrieval system
