Semicossyphus pulcher (California sheephead): 138593385
Help
Entry
138593385 CDS
T10596
Symbol
trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spul03016
]
138593385 (trub1)
Enzymes [BR:
spul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
138593385 (trub1)
Transfer RNA biogenesis [BR:
spul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138593385 (trub1)
Prokaryotic type
138593385 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
138593385
NCBI-ProteinID:
XP_069520480
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MAGNISTTATPITSCLSKLQSVNGLFAIYKKQGPTSADVLNTLKEALLKEAGVQNPNPRK
RKKQSLKMGHGGTLDSSASGVLVVGVGNGTKMLSTMLAGSKKYVAVGELGKATDTLDASG
SVTLEKDFEHITRSDFEEKLKTFTGDIMQVPPLYSALKKDGQRLSVLLKKGHKVEAKPAR
PVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLE
EHVLHEEQWTLEHILRTLQPCTEAESGGNCTKPPKADT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatataagtaccacagctactcctataactagttgtttatctaaactacag
tctgtaaatggattgtttgcaatatataagaaacaagggccgacgtctgcagacgtgtta
aatacgctcaaagaagctttactcaaagaggctggtgtacaaaaccccaacccgcggaag
aggaagaagcagagcctgaagatggggcacggagggacgctggacagctcagcctccggg
gtgttagttgttggggttggaaatggcacaaagatgctcagtacaatgttggctggttct
aagaaatatgttgctgtgggggaactgggaaaagcaacagatactcttgatgcctctggc
agcgtgactctggagaaagactttgagcacatcaccaggtcggactttgaggagaagctg
aaaactttcactggtgacattatgcaggttccaccactctactcggctctgaaaaaagac
ggtcagcgtctgtctgtcctgctgaagaaaggtcacaaggtcgaagccaaaccagccaga
ccagtgactgtttacaacctgaccctgcaggagttcaagcctcctctcttcactctggat
attgagtgtggcggtggattttatgtcagaagcttggtggacgacctgggaaaagctctg
tcatcatgtgctcatgtaaaagaactgacccggaccaagcagggtcagttcacactggag
gagcacgtcttacacgaggagcagtggacgctggagcacatcctgcggactctgcagccc
tgcacagaggctgagtcgggtgggaactgtacaaaaccaccaaaggctgacacctga
DBGET
integrated database retrieval system
