Semicossyphus pulcher (California sheephead): 138594055
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Entry
138594055 CDS
T10596
Symbol
myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Membrane trafficking [BR:
spul04131
]
Endosome - Lysosome transport
Others
Ferlins
138594055 (myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138594055
NCBI-ProteinID:
XP_069521251
LinkDB
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Position
Unknown
AA seq
2055 aa
AA seq
DB search
MLRVAVQSAKNLPKKKVGSPDPIVSVIFKDEKKKTRSIDSEVNPVWNEVIEFDLKGSALD
SSSFIDVVVKDYETIGSNKFLGSTKIPLRDLAAGQVRSLPSRNVPLVNENGQNIGATIDL
VVSYDPPANAAHNPNDPHSGDATVDAGGGGDEGDETQPDGVQGGSAGAPLSPGQSVNIRK
RLARAHSRHRLVNKPQDFQIRVRVIEARQLSGNNVKPVVKVSVCGDTHRTRIKRGNNPFF
DEIFFYNVHMLPSDLFDKHISFRIYNSYSLRADSLMGEFKLDVGYVYDEPAHCVMRKWLL
LNDPDDSNSGAKGYLKVSLFVVGAGDEPPVEKREVNDDQDDIESNLLLPASVTLRWATLS
LKVFRAEDVPQMDDAFIQTMKGIFGGDENKKNLVDPFLEARFAGKKLCTQVIEKNANPEW
NQVLNLQVKFPSMCERVKLTVFDWDRLTGNDAIGTTYLNLAKIASSGGEIEEEHAGIEEM
PSYEANTGQSEVGFLPVFGPCYVNLYGSPREFTGLPDPYEDLNYGKGEGVAYRGRVLVQL
STKLEGKEDKTVDSIHSDDILVVQKYQRRRKYCLCAVFHSASMIQEPGEPIQFEVSIGNY
GNKLDTTCKPLASTTQYSCAVFDGNHYYYLPWADTKPVVVVTSFWEDISHRLDSVNIILY
ISHRLQSNLEAFKTGILAKVPDNELVEVWLKLLTQLIEDLESFPTPELEGRSNLTSLDVQ
IKKLRDSDLTNIKEGARRMREEAREIRDTLSDLESWAEKLKVLAEEPQNSMPDVIIWMLR
GEKRVAYSRIPAHQILFSTYSEQACGQHCGKMQTVFLQYPMDKAKGLKVPVQIRVNMWLG
LSTHDKKFNSYSEGTFSVFAEMYENQAQVFGKWGTTGLVGRHKFSDVTGKLKLKQEYFMP
PRGWEWEEDWFIDPEKALLTEADAGHTEFMDEVFQNETRFPGGEWKGASEPFTDVNGEKS
RNPGEFDCPPGWVWEDEWTVDDNRAVDDQGWEYGVTIPPNDKPLSWVPAEKVYHVHRRRR
LVRPRRRAAVPAGGAQRRDLGDPEGWEFSSLIGWKFHRKERSSDTFRRRRWRRKMAPEDR
LGASAIFQLEGALQGVDTEEKEKGSKADASKMFGANTPTVSCSFDRSYVYHLRVYVYQAR
NLASMDKDSFSDPYAHVSFLHLSKTTEKLPATLNPTWDQTLIFTDIEIYGDPRNVALRPP
DVVLEFYDHDQVGKDEMLGRSVCSPMVKLNPSMDQTPKLLWHPVIQKGVMAGEALVAAEL
ILKDKSGESDLPLVPPKRAENLYMVPQGIRPVVQLTAVEILAWGLRNMKSYQLASVSSPC
LVVECGGQRVESAVIKNMKKSPNFPSSVLFIKVLLPKEEMYTPPIVLKVIDHRPFGRKPV
VGQCTITSLEKFRCDPYVITAEGAMSSKMALMMASPSKQVSINMDESRPLLDTQIAEKEK
ETVDWWSKLYASVGDQEKCGPYLKKGYDTLKVYECELEDVPEFKGLTDFCSTFKLQRGKN
ENGDDDPSVVGELKGSFKVYPLPDDPGIAPPPRQFRELPESGPQECLVRVYVIRAVDLQP
KDNNGRCDPYIRISLGRNTIDDRDHYLPNTTNPVFGRMFEMTCFLPQDKDLKISVYDHDL
LSRDEKVGETVIDLENRFLSRYNSYCGLPQTYCISGINQWRDQMKPSEILENLARLKGLS
KPRTEDNGTSLAFNGKEYTLAQFEANKEIHQHLGPARERLCLHVLRKQGLVPEHVESRTL
YSTFQPTLSQGTLQMWVDVFPKSIGVPGPPFDITPRKPKRYFLRAVVWNTTDVTLDETSI
TGENMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFIFDFEYLPAEQLCLVSKKE
RFWSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTLELDLRNLVAPAKTPEKCSLSMMDNL
EIGAPQKTENAKSLFAQQSVRGWWPCSIEQDGQKVIGGKVEMTLEIVSEADADEKPAGKG
RDEPNMNPKLDPPKRPDTSFFWFTSPCKTMKFIVWRRFRCLFIGLIILTIVILFLAILLY
SLPNYISMKIVKPLK
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggtcgcagtacagtcggctaaaaatctgcctaaaaagaaagttggaagtcct
gacccaattgtctctgtgatttttaaagatgagaagaagaaaacaagatcgattgacagt
gaggtgaatcctgtgtggaatgaggtgatcgaatttgacctgaagggcagcgctctggac
tccagctccttcatagacgtggttgtgaaagactatgagactattgggagtaacaaattc
ctcggctcaaccaagatccctttgagagacctcgctgcaggtcaagtgaggtcactacca
tctagaaatgttcctctggtcaacgaaaatgggcagaatattggagctacaatcgacctt
gtggttagctatgatcctccagccaacgctgcacataaccccaacgatcctcactcgggg
gacgccacagtggatgctggtggtggtggtgacgagggtgatgagactcaaccagatggg
gtccagggtggctctgctggggccccgctgtccccgggtcagtctgttaacatccgtaag
cggctggccagggcccacagtcgccaccgactagtcaataaacctcaggacttccagatt
cgtgtccgggtcattgaggcccgtcagttgtctggcaacaacgtcaaacccgtggtgaag
gttagcgtgtgcggagacacgcacaggaccaggatcaagaggggaaacaaccccttcttt
gacgagattttcttctacaatgtccacatgctgccatcggacctgtttgataagcacatc
agcttccggatttataattcttactcactgagggctgacagtctcatgggagaattcaag
ctggatgttggttacgtctatgatgaaccagcccactgtgtgatgaggaagtggctcctg
ttgaatgacccagatgactctaactcgggggcaaaaggctacctcaaagtcagcctcttc
gtggtgggggctggagacgagcctccggtggagaagagggaggtgaacgatgatcaggac
gacatcgagagtaatctgctgctgccggctagcgtgactctgcggtgggccacgctgtcg
ctgaaggtgttcagagcggaggacgttccccagatggacgatgcattcattcagaccatg
aaaggaatctttggaggagatgaaaacaagaagaacctggtcgacccctttttagaggct
cgctttgctggaaaaaagctgtgtactcaggtcatcgagaagaacgcgaacccagagtgg
aaccaagtgctgaacctgcaagtaaagttcccctccatgtgtgagcgtgtcaaactgaca
gtctttgattgggatcgtttgacaggaaatgatgctattggcacgacatacctgaacctg
gccaagatagcctcctctggtggagagatagaagaggaacatgcaggaattgaggaaatg
ccgtcatatgaagcaaacacaggccagtctgaggtgggcttcctgccagtctttgggccc
tgctatgtcaacctgtacggcagcccccgagagttcaccggcctgccagacccctacgaa
gaccttaattatggcaagggcgaaggagtggcctacaggggcagggtcctggtgcagctg
tccactaaactagagggaaaggaagacaaaacagtcgacagtatccacagcgatgacatc
ctggtggtgcagaagtaccagaggaggaggaagtactgtctgtgtgcagtcttccacagc
gcctccatgatccaggaaccaggagagcccatccagtttgaggtcagcatcggtaactac
ggcaacaaattagacaccacctgcaaacccctggcctccaccactcagtatagctgcgct
gtgtttgatggtaaccactactattacctgccctgggcggacacgaagccagtggttgtg
gttacctcgttctgggaggacatcagccaccgcctggactcagtcaacatcatcctctac
atttctcaccgcctgcaatccaacctggaggcgtttaaaactggcatcctggcaaaagtg
cctgacaacgaactggtcgaggtgtggctgaagctgctcactcagctgattgaagacttg
gaaagtttccccacacccgagctggagggccgctccaacctgacatctctggacgtccag
atcaagaagctgcgggacagcgatttgaccaacatcaaggagggagcccgacgcatgaga
gaggaggcccgagagatccgggacactctgtctgacttagagtcctgggccgaaaaactc
aaagtgctggctgaggagccccagaacagcatgcctgatgtgatcatctggatgttacgt
ggggagaagagagtggcctacagtcgcatccccgctcaccagatcctcttctccacatac
agcgagcaggcctgtgggcagcactgtggcaagatgcagaccgtcttcttacagtacccc
atggacaaggccaagggcctgaaggtgccagttcagattagagtcaacatgtggctcggt
ctgtctacacatgacaagaagttcaactcgtactctgagggaaccttcagtgtgttcgct
gaaatgtacgagaaccaggcgcaggtgtttggtaagtgggggaccacaggactggtgggc
cgccacaaattctccgacgttacgggcaaactgaagctgaaacaagagtacttcatgccc
cccagaggatgggagtgggaagaggactggttcattgacccagagaaagctctgttaaca
gaggcagacgccggacacactgaattcatggacgaggtgttccagaacgagactcgcttc
cctggcggagagtggaagggcgcctccgagcccttcactgatgtgaatggagagaagagc
cgtaaccccggagagttcgactgtcctccaggttgggtctgggaggacgagtggactgtg
gatgacaaccgagccgtggatgatcaaggctgggagtatggagtcaccatccctcctaat
gacaagcctctgtcctgggtccctgcggagaaggtttaccacgttcaccgcaggaggcgt
ctggttcgacctcgcaggagagccgctgtccctgcaggaggagcccagaggcgggaccta
ggtgaccctgagggctgggaattctcttctctgattggctggaagtttcacaggaaggag
cgttcgtcggacacgttccgtcgaaggcgctggaggcggaagatggcaccggaggaccgg
ctgggagcatccgctatcttccaactggagggagcgttgcagggtgttgatactgaggag
aaggagaaaggctccaaggccgacgccagcaagatgtttggtgccaacacgcccactgtg
tcctgctcctttgacaggtcatatgtgtaccaccttcgtgtctacgtatatcaggcacgc
aacctggcatctatggacaaagacagtttttctgatccgtacgctcacgtctccttcctg
catctcagcaagacgacagagaagctgccggcgacactgaacccgacctgggaccaaacg
ctaatcttcactgatatagagatttatggagacccccgcaacgtcgccctccgaccccct
gatgttgttctagagttctacgaccacgaccaagtggggaaggatgagatgctgggccgc
agtgtttgcagccccatggtgaagttgaatccaagcatggatcagacacccaaactgctg
tggcaccccgtcatccagaaaggtgtgatggcgggagaggctctggtggctgctgaactc
atcctgaaagacaagtcgggcgagtcagatcttccccttgttcccccaaagagagccgag
aacctctacatggtccctcagggcatccggccggtggtgcagctcactgctgtggagatc
ctagcgtggggcctgaggaacatgaagtcctaccagctggcctcggtgtcgtcaccctgc
ctggtggtggagtgcggggggcagagagtggagtcagccgtcatcaagaacatgaagaag
agccccaacttccccagctctgtcctcttcatcaaagtgctgcttccaaaggaggagatg
tacacgcctcccatcgtgctgaaggtgatcgaccaccgcccgttcggcaggaagcctgtg
gtgggtcaatgcacgatcacctctctggagaaattcagatgtgacccgtatgtcatcacc
gcagagggagccatgtcctccaaaatggctctgatgatggcctcgccttccaaacaggtc
tccattaacatggacgaatcaaggccgctgctggacactcagattgcagagaaggaaaaa
gagacggttgattggtggagtaaactctacgcctcggtcggagaccaggagaaatgtggc
ccttatctgaaaaagggatacgacaccctgaaagtgtacgaatgcgaactggaagacgtc
ccagaattcaaaggactgactgatttctgcagcaccttcaagctgcagcgaggcaagaat
gaaaatggggacgatgacccctctgtggttggagagttgaagggttcattcaaggtgtac
cctctgccagacgaccccggtatcgctcctcctccgcggcagttcagagagctgccagaa
agcggacctcaggagtgtctggtcagggtttatgtgatccgagctgtagacctgcagccc
aaagacaacaacggcagatgcgatccatacatcaggatttccctgggaaggaacacgatc
gacgacagagaccattacttacccaacaccaccaaccccgtgtttggaaggatgtttgag
atgacgtgtttcctgccccaggacaaagacctgaaaatctccgtctacgaccacgatctc
ctgagccgcgacgagaaggtcggggagacggtgatcgacctggagaaccgcttcctctcc
agatacaactcctactgcggcctgccacaaacctactgcatttctggtataaaccagtgg
cgagaccagatgaagccatctgagattctggagaacctggctcgtctgaagggcctgtcc
aaacccaggactgaagacaacggcacatcactcgccttcaacggcaaagagtacacactg
gctcagtttgaggccaacaaagaaatccatcagcacttgggtccggcccgagaacgcctc
tgtctgcacgtgctgagaaaacagggactcgtccccgaacacgtggagtccaggactctt
tacagcaccttccagcccaccctgtctcaggggacccttcagatgtgggtggatgttttc
ccaaaaagcatcggcgtccctggacctccctttgacatcacaccacgcaaacctaagagg
tatttcctgcgtgccgtcgtctggaacaccaccgacgtgactttagacgagaccagcatc
acgggcgaaaacatgagcgacatctacgtcaaaggctggatgcccggcatggaggaggac
aagcagaagactgacgtccactacaggtctctggacggagacgggaacttcaactggagg
ttcatctttgacttcgaatacctgcctgctgaacaactctgcctcgtgtccaagaaggag
cgcttttggagtcttgacaaaacagagttcaggattccccccaagctgattgttcagata
tgggacaacgacaaattctcattggacgattaccttggcacactggagctggatttgcgt
aacctggtcgctcctgcaaagaccccagagaagtgctccctgtcgatgatggacaatctg
gagatcggcgccccgcaaaagacggagaacgcaaagtccctgtttgctcagcagtcggtc
agaggctggtggccctgttccatcgagcaggacggacagaaggtcatcggtggcaaagtg
gagatgacactggagattgtcagtgaagcagatgcagatgagaaacctgcaggaaaagga
cgagacgaacccaacatgaacccaaaactggaccctcccaaacgcccagatacgtccttc
ttctggttcaccagcccttgtaagaccatgaagttcatcgtgtggcgacggttcaggtgc
ctcttcatcggactcatcatcctcaccatagtgattctcttcctcgccatcctgttgtac
tctctaccgaactacatctcaatgaagatagtgaaaccactaaagtaa
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integrated database retrieval system
