Semicossyphus pulcher (California sheephead): 138594284
Help
Entry
138594284 CDS
T10596
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138594284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138594284
03009 Ribosome biogenesis [BR:
spul03009
]
138594284
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138594284
Spliceosome [BR:
spul03041
]
Complex A
U1 snRNP components
U1 related factors
138594284
Complex B
138594284
Ribosome biogenesis [BR:
spul03009
]
Eukaryotic type
Pre-60S particles
Helicases
138594284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
138594284
NCBI-ProteinID:
XP_069521441
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDATRRPLQEVEQYRRNKEVTVKGRDCPKPIIKFHEAAFPSYVMDVIGKQNWTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRVSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGGSYRDRDGDRGFGGGPKSAFGGNKAQNGG
GYGGNSGNSSGSYGNNNYNNSNGQGNFGAPSNQVGAFGNQSFQGPPQFGAMQRAAQNGMN
HPPFPFNSQPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagacagagaccgtggcagagacagagggtatggtggaggacctcct
cgttttggtggtggtggtggaggcaataggggcggacctcctccaggaaagtttggcaac
cctggtgagaggctgcgaaagaaacactggaacctcgatgaactccctaagtttcagaag
aacttctaccaggaacatccagatgccactcgaagaccacttcaagaggttgaacagtac
cggagaaacaaagaggttactgtaaaaggcagagattgtcccaaaccaataattaaattc
catgaagctgcatttccaagctacgtcatggatgttattggcaaacaaaactggactgaa
ccaactccaattcagtcacaggggtggcctgtcgccctgagtggtaaagacatggttggc
atcgctcaaactgggtctgggaaaacccttgcataccttctgcctgcaattgtgcacatc
cagcatcaaccattcttggagcatggagatggaccaatctgcttggtgttggcaccaacc
cgtgagctggctcagcaggtgcaacaggtggctgctgaatatggcagggtctcccgtctc
aagagtacctgcatctacggtggtgcacccaaaggacctcaaattagggaccttgagagg
ggtgttgagatttgcattgcaaccccagggcgtctcatcgacttcctagagtgtggtaag
actaatttgcgtcgttgcacctacctggttctggatgaagctgaccgcatgctggacatg
ggatttgaacctcagatccgcaagatagtggaacaaattcggccagaccgtcagaccctg
atgtggagcgcaacctggccgaaggaagttcgccagctggctgaggacttcctgaaggac
tatgttcagatcaacatcggcgcgctgcagctcagtgccaaccacaacatcttgcaaata
gttgatgtttgcaatgacatggagaaggaggacaaactgatccgtttgctggaggagata
atgagcgaaaaggagaacaagaccattatttttgtggagaccaaaaggcgttgtgatgag
ctcaccaggaggatgagaagagatgggtggccagccatgggaattcatggagacaagagc
cagcaggagagggactgggtcttaaatgagttcaggtatggcaaagctccaatcctcatc
gcgacagatgttgcctcccggggcttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggattatatccaccgcattggacgcacagcccgcagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggccagtgacctg
atctctgtgctccgcgaggccaaccaggccattaaccccaagctgatccagatggcagag
gacagaggaggtcgcggacgggggggaagaggtggctacaaggatgaccgtcgggatagg
tattctgggggtgggaggagtaactttggcggtggtagctacagggacagggacggtgat
agagggtttggcggtgggcccaagagtgcctttggtggcaataaggcccaaaatggtggc
ggttatggaggtaacagcggtaactctagtggtagctatggcaacaacaattataacaac
agcaatggacagggcaattttggtgctccgtcaaaccaggtgggtgcctttggtaaccaa
agcttccagggcccccctcagttcggggccatgcagagggccgctcagaatggcatgaac
cacccgccattcccgttcaactcgcaaccaccaccacaggcccagcagccaccgccccct
ccaccaatggtgccctaccccatgcccccacctttccctcagtag
DBGET
integrated database retrieval system
