Semicossyphus pulcher (California sheephead): 138594293
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Entry
138594293 CDS
T10596
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
138594293 (helz)
3'-5' decay
Other 3'-5' decay factors
138594293 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138594293
NCBI-ProteinID:
XP_069521456
LinkDB
All DBs
Position
Unknown
AA seq
2056 aa
AA seq
DB search
MADRRAEKSCEEASRSLTRREYEAAVSHSTDALVVLAPQAQSSVAPVPPSPTSLVAATGP
LRSRVLLYRIAAFLQLKNYDEADEDCKHVLAEEMARGDGSLQASLRFMHLDGSLQEVVSI
LSKALYGEQMNGIVAKDMSRLKRLFSEIEAINGKMAPEYTDDQEEEVQDGWQFRPPPRGV
TSSEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENY
METLIEKWMNSLSPERVLSDYLDGVNVETSSSLSVTVTSKKSAHSWTFSLLCKPARKLFR
IALLYDAHRPHFFITGVAAGDRLQALPKGCQEWTPGEEAAVAVDNGLDHCIYKVAVGFST
EIFGTFRQTVVFDFGSEPVLMQRIMVDAASIEDLEHLMAARQQLLMTAKRWDSSCKTIVE
FVPNETMADLERSLLSRYQIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKE
VSKFNIKVNLQLVTSFMLTGISVGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSV
LLLPLGREGMCGHPPPGVKERVYEAVIEEKTKDYIFLRICKECCDELGLIPDREIQVELQ
FQLNRLPLCEMHYALDRIKDNTILFPDVGLIPTIPWSPNRQWDEQLDPRLNAKQKEAILA
ITTPVSIPLPPILIIGPYGTGKTFTLAQAVKHILRQEQSRVLICTHSNSAADLYIKDYLH
PYVEAGNPHARPLRVYFRNRWVKTVHPVVQQYCLISSTHITFQMPTREDILRHRVVVVTL
STSQYLCQLDLDPGLFSHILLDEAAQAMECETIMPFALASKTTRIVLAGDHMQLSPFVYS
EFARERNLHVSLLDRLYEHYPPEYPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQP
SHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEELRKKWPVAWGKLDEGSIGV
VSPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRK
EQLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFVSICH
ENSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPMQGHHSSSQALHPHHHPH
PQHAQPISNKQGPQQQQQQQQQQQQSPPKGKHANHTEHLPPEGYVQPNPAMLMGNPIRAF
TPPLGGTPAGMGKSPSPVQRIDPHTGASILYVPAVYGGNMVMSMPLPLPWPGYQNRFAVD
PRIMSHPAAMAYNFNLLQAQNRGSPIPYSGMAHPSPLGMGQPSPDKELQADPIRNGKLEG
CPKSEQSRLQTPERKTADMKEKQGDLDTGQSRSLDSEGLVGFPNALLHRKDPSAAQRPLN
YHLAPPNPAFPPHPASGRAFPPQYPLSRLPYRVSQPQHPGMAQQSQQQQQLSPAYAGGSH
NASFFSGPIPAHRAVQSPTLDGPESGGVEEMSASIRTPMGQPGGHHPGLSQHNRVNSFGE
DGQDGSLGESLDLQGPLALEALSQQQQQQAARLGQWGEAAGPFLQGSVAFPLPQQLAHLA
QPGMARFPPQLLRAASWGLSANMEDEAVSSASTGPPYTRYPGLLREMPPQDQPEPREAAE
MQPPPQSRLLQYRQSQSRASGDPSSSLAATSNHAGPFPQGPYPHDTGRDLLNDNLLNNPA
LQQQQHPGNPMYNSGSYPHQPPAHPASPPPSQVKYLLQEAQWSHGGAASVSPPQQNHLMG
NQGHGLPYGLPIMAHPSRQEQVHLMQLHHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQHHQQSQGPDQESYHPLSPRTSAATALHNVDEYEPRGPGRPLYQRRISSSYPDDSSPA
NTHNALSQQSQPCTSDPQDHPHPHIQHHQHPHAPYGYPSHDLWPSNGGGPGPFQNIPCNG
AGTLAQHRDLMASKALRQTEEQVKAEATAAQQTHPHSLNSLQHLGQFPPLMPNNKHQQQQ
QPPPPPPPQAPTEAGQGPPNLSKPPTMSYASALRAPPKPRAVRPDQAKKNSDPLSLLQEL
SIGSSNGSNGYYSYFK
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggagaagtcatgtgaagaagctagcagatcgttaaccaggcgg
gagtacgaggcggcagtcagccatagcacggacgccctggtggtcctcgcgccccaagcc
caatcatccgttgcccctgtcccgccgagccctacatcccttgtcgctgccaccggaccc
ctccgcagccgagtcctactctacagaatcgctgctttcctgcagctgaaaaactatgat
gaagcagatgaagactgcaaacatgtcctggcagaggagatggccaggggagacgggtcg
ctacaggccagcctgcgcttcatgcatttggatggcagcctgcaggaggtggtcagcatc
ctctcgaaagcattgtacggagagcaaatgaatggcattgttgcaaaagacatgagcaga
ttaaaaagactcttctcagaaatagaggctataaacgggaagatggcaccagaatacaca
gatgaccaggaggaagaggtccaagatggctggcagttccggcctcctccccgaggagtc
accagcagtgaggagtataccctctgtaaaaggtacttggagcagggtctttgtcggtac
ggggcccagtgtacgtcagcccactcgcaggaggagctgatggaatggcagaagcgctac
gcgtcacgcctcatccgcctcaagcagcagcaggagagcaaacacttcacggagaactac
atggagacgctgatagagaagtggatgaactccctctccccagagagagtgcttagtgac
tatttagatggagtgaatgtagaaaccagctccagcctctctgtaaccgtcacttccaaa
aagtccgcccactcctggaccttctccttgttgtgcaagcctgctagaaagctgttccga
atcgccctgctctacgatgcccaccggccacacttcttcatcacaggtgtggcagcaggg
gaccggctacaagccctccccaaaggctgccaagagtggaccccaggagaggaggcagca
gtggcagtagacaatggcctggaccactgtatctacaaggtggcagtgggcttcagcaca
gagatctttggcaccttcagacagaccgttgtttttgacttcggctctgaacctgtgctg
atgcagcggatcatggtggatgctgcctctattgaagacctcgaacacctgatggcagcc
aggcagcagctcttgatgaccgcaaagcgctgggactcctcctgtaagaccatcgtagag
tttgttcccaatgaaacaatggccgatctggagcgcagcctcctctcccgctatcagatc
cctctgtcggccgaccagctcttcacccagtcggtcctggacaagactcttaccaaagac
aactaccaggcccgactgcacgacctgctctacatcgaagagatcgcacagtataaggaa
gtcagcaagtttaacatcaaagtgaacctgcagctcgtcaccagctttatgctgaccggc
atctctgttggagccaagtatgcccagaatggacagctctttgcacgcttcaaactcact
gaaacactttcggaggacactctggccgggcggctagtgatgaccaaggttaattcagtt
ctgctgctgccattggggcgtgagggcatgtgcggccacccgccacctggggtcaaagag
cgcgtttacgaggctgtgatcgaggagaagaccaaggactacatctttctgaggatctgc
aaggaatgctgcgatgagctggggctaatccctgacagagaaatacaggtggagctccag
ttccagctgaacagactgccactctgcgagatgcattatgccctggaccgcatcaaagat
aacaccatcctctttcctgatgtgggtcttatccccaccatcccatggagccccaacagg
caatgggacgagcagctggatccccgtctgaatgccaagcagaaagaggccatcctggcc
atcaccacacccgtttctatccccctgccccccatcctcatcattgggccctacggcacc
ggcaagaccttcaccctggcacaggctgtcaagcacatcctccgccaggagcagagcagg
gtcctcatctgcacccactccaacagtgcagctgacctttacattaaggactaccttcat
ccttatgtagaagcaggcaatccgcatgccagacctctcagggtatacttcaggaaccgc
tgggttaaaacggttcacccagtggtccagcagtactgtctcatctccagcacacacatc
actttccagatgcccaccagggaggacatcctcaggcaccgtgtggtggtggtcaccctc
agcacctcccaatacctctgccagcttgacttggaccccgggttgttctctcatatcctg
ttggatgaagcggcccaggccatggagtgtgaaaccatcatgccttttgctcttgctagc
aagaccacccgcatcgtgctggctggagaccacatgcagctgagtccatttgtgtacagc
gagtttgcgcgggagcgtaacctgcatgtgtcactgctggaccggctgtatgagcactac
ccacctgagtacccctgtcgcatcctcctgtgtgagaactaccgctcccatgaagctatc
atcaactacacatcagaattattttatgatgggaagttaatggcaagcgggaagcagccc
tcccataaggacttctaccctctgaccttcttcacagccagaggagaggatgtgcaggag
aagaacagcactgcctactacaacaacgctgaggtgtttgagatcgtggagcgggtggag
gagttgcggaaaaagtggccggtggcctggggcaagctggacgagggcagcattggagtg
gtgtcgccgtacgccgaccaggttttccgcattcgtgctgaactccgaaagaagaggatg
cacgaggtcagcgtggaaagagtgctcaatgtccaaggaaaacagttccgggtgctgttc
ctcagcacggtgcggacgcggcatacctgcaagcacaaacagacggccatcaaacgcaaa
gagcagctggttgaggactcgacagaggacctcgactatggatttctctccaactacaag
ctcctcaacacggccatcaccagagcacagtccctggttgcagtcgtgggagaccccata
gccctgtgctctgttggacgctgcagaaaattctgggagcactttgtctcgatttgccat
gaaaactcgagcctgcacggcatcacctttgagcagatcaaggctcagctggaggctctg
gagctcaagaagacctacgtcctgaacccactggccccggagtttatcccccgagccctc
aggcccatgcaagggcaccactcttcttcgcaggccctccatccccaccatcatcctcat
cctcagcacgctcagcccatctccaacaagcagggtccacagcagcagcagcagcagcag
caacagcagcagcagtcacccccaaaagggaaacatgcgaaccacacagagcaccttcca
cctgaaggatatgtccaacccaaccccgccatgctgatgggaaacccgattagggcattc
acaccacctttgggtggcacaccagctggtatgggcaagtcacccagtcctgttcagagg
atagatcctcatactggtgccagtatcctctacgtcccagctgtgtatggtggaaacatg
gtcatgtccatgcccctgcctttgccttggcccggttaccagaatcgcttcgctgtggac
cctcgcatcatgagccatccagcagccatggcgtacaactttaacctgttgcaggcccaa
aatcgaggctcccccatcccttacagtggaatggcccacccctctcctctaggaatgggc
cagcccagccctgacaaggagctacaggcagaccccatcagaaatggtaaattagaagga
tgtccaaagtcagaacagagccgtcttcagacaccagagaggaaaaccgcagacatgaag
gaaaaacagggagatttggacaccggtcaaagtcgaagtctagactcagaagggctcgta
ggatttccaaatgcgcttctccatcgaaaagatccctcagcagcccaaagacccctcaac
taccacctcgcacccccaaacccagcgtttcccccacatcctgccagtggaagagccttc
cccccgcagtaccccctctccaggcttccttatcgggtcagccagcctcagcacccaggg
atggcccagcagagtcagcagcagcagcagctcagccctgcatatgccggtggaagccac
aacgcgtccttcttcagtggcccaatacccgctcacagggccgtccagtcccccactctg
gatgggccagagtctggcggggtggaggagatgagtgcctccattaggactccaatgggc
caaccagggggccaccatccagggttgtcacagcataacagggtcaacagctttggggag
gacggacaggatggaagcttgggagagagtctggacctccaggggcccttggctctagag
gcactgagccagcagcagcagcagcaggcagccaggctgggccagtggggggaggcagcg
ggccctttcctccagggcagcgtcgcctttcctctgccccaacagctcgcccatctcgct
cagcctggcatggctcgcttcccccctcagctgctccgggcagctagttggggccttagt
gccaatatggaggatgaggctgtatcttctgcctccactgggccaccgtacaccaggtac
ccaggcctcctgagagagatgcccccacaggatcagcctgagcccagggaagcagctgag
atgcagcccccaccacaatctcgtctcctacagtaccgccagtcccaatcccgtgcctca
ggtgacccttcatcctctttagctgccacctccaatcatgccggccccttcccacaggga
ccttacccccatgacaccggccgcgatctccttaacgacaaccttctcaacaacccagcc
ctgcagcagcagcagcacccggggaaccccatgtataattctggtagctacccacatcag
ccgccagcccaccctgccagcccccctccctcccaagtcaaataccttctccaagaggcc
cagtggtcccatggtggagctgcatcagtgagcccaccacagcagaaccacctgatgggg
aatcagggccacggtcttccatacggactgcccatcatggctcacccaagcaggcaggag
caagtccacctgatgcaactgcaccatcagcaccagcagcagcagcagcaacagcaacaa
caacaacaacaacaacaacaacaacaacaacagcaacagcagcagcagcagcaacagcag
cagcagcaacaccaccaacaaagccaaggtccagaccaggagtcgtatcacccactgtcc
cccagaacatcagcagccacagcccttcacaacgtagacgagtatgaacccagaggtcca
ggccggcccctctatcaacgtcgcatctcctccagctacccagatgactcgtctccagcc
aacacccacaacgccctctcccagcagtcccagccctgtacatcagacccccaggaccac
cctcatccacacatacagcatcatcagcacccacatgccccctacggttacccctcacat
gacctctggcccagtaatggtgggggtcccggtccgttccagaacattccatgtaacgga
gccggcacactcgctcagcaccgggacctcatggcatccaaggcccttcgtcaaacggag
gagcaggtgaaggcagaggccacggcagcacagcagacacacccacactccctcaactcc
cttcagcaccttggacagttccctcctctcatgcccaataacaagcatcagcagcagcag
cagcctccaccgccgccgccgccgcaggctccaacagaggccggacaggggcctccaaat
ttgagcaaaccacccaccatgtcctacgccagtgccctccgtgctccacccaagccccga
gctgttcgccccgatcaggccaaaaagaacagcgaccctctctccctcctacaagagctg
agtataggaagttcaaatggtagcaatgggtactattcctactttaaatga
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integrated database retrieval system
