Semicossyphus pulcher (California sheephead): 138594444
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Entry
138594444 CDS
T10596
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138594444 (shoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
138594444
NCBI-ProteinID:
XP_069521628
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSTLGKEKESKEKDPKGGPAGKEREKEAKALASLVKDGGKESKTKGKDAKDGKRETSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLASLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIQED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagaatcgaaagaaaaggaccctaaaggtggtccg
gcggggaaagaaagggaaaaggaggccaaggctctagccagcttagtcaaagatgggggc
aaagaatcgaagaccaaagggaaagatgccaaagatggaaagagggaaaccagcagctcg
acaccgggtgttgccttctctgttgacaatacgataaagcgtccaaacccggcaccaggt
acgcgcaaaaagtccagcaatgccgaggtgatcaaagagcttaataagtgccgagaggag
aactcaatgagactggacctatcaaaacggtccattcacatgctgcccacctccataaag
gagttgacacagctggctgaactctacttatacagcaacaagctgcagagcctgccggct
gaggtgggctgtctgtcgggcctggtcactttggccctgagcgagaactccctgaccagt
ttgccggactcccttgactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagataccggctgtggtctaccggctggcgtctctgaccacgctgtacctgcgc
ttcaaccgcatcacaacagtggagaaggacatccgaaacctttctaagctcactatgctc
agcatacgtgagaataagattaaacagctgcctgcagagataggggagctgtgtaacctc
ataactctggatgttgcccataaccagttggaacacctaccgaaggagattgggaactgc
acacagataaccaacctcgacctgcagcacaatgagctcttggacctcccagaaactata
ggcaatctggcgagcataaatcgcttaggtctgagatacaacagattgtccgccatcccc
agatcattagccaaatgtcgagaactggaggagctaaaccttgaaaacaacaacatttca
gtgttgcctgagggcctactgtcaagtctggtcaacctgaccagtctaacgctggccagg
aactgcttccagtcgtaccccgttggtggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgtatcaacaagatcccctttggtatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatctctgccgttggactttggcaca
tggactagcatggttgagctcaacctggcaaccaatcagctgacgaagatccaagaggac
gtctgtggtttagtctctctggaggttttaatactgtccaataaccttctgaagaagtta
ccacatggtattgggaatctgagaaagctgcgggagctcgacttggaggagaacaagttg
gaatctctacccaatgaaatagcttatcttaaagacttacagaaactggtgttgacgaat
aatcagctgactacgttacccagaggcatcggccacctcaccaacctcactcatcttggt
ttgggagagaaccttctgcaacaccttccagaggagattggtacactggagaacttggag
gagctgtacctcaacgacaacccaaacctgcacagcctcccgttcgagctggcgctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccgccacagatt
gtcgcaggaggcccctccttcatcatccagttccttaagatgcagggaccgtaccgtgcc
atggtctga
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