Semicossyphus pulcher (California sheephead): 138594461
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Entry
138594461 CDS
T10596
Symbol
pdcd11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Ribosome biogenesis [BR:
spul03009
]
Eukaryotic type
90S particles
Other 90S particles
138594461 (pdcd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138594461
NCBI-ProteinID:
XP_069521656
LinkDB
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Position
Unknown
AA seq
1819 aa
AA seq
DB search
MASVEEDFPRGGMAKKPTESKIVVQRTEVDNLFQSNEQVETKKRKGAVKDDGKKFKKQKT
DKGKEDVLTLNAAAKCVEILHIKNVKEGMLMLGCVKEVADFEVTVSLPCGMQGFLSIKNI
CDSYAKLLSEQLDSADTEEICSLPHLFHTGMVVRCVVAKLDVAKGGSLSIQLSINPKLLN
KALTSSSLKAGMVLSGCVDSVEDHGYIIDIGISGTKAFLPKKAVEDSQNNSDELKVGQYL
TCQVEEVKNDGRVVRLSVSPPTIAQASAESTQGWNLANLLPGLLVKATIKKVTKHGLLLD
FLSSFSGHVDFLHMEPDQASSYTVGTEVQACVLYVEPSTRLVALSLRSYLVQPGIRVETT
PAGGDRIGEVVKECKMTRMHHMSGAVLELPDKTLAFVHRNHLKEPNVPVNENRLMAMSEH
TCRILDFSAMDQIHFASLRKSVIERRFYRYHDLQAGQVVEGTVSVLLNHGMVVHLSDHIK
GLVPRTHLSDIILKNPEKKYTEGMKVKCRVLSVDAESKKLYLTRKKALVESSLPLFLSYS
DARPGCVSHGYIVCIKDFGCIFRFYNNVKGLVPLRELSSELIISPEEVFYVGQVLKAKVI
QCDPEKAKMVLSFKAAVEGDPEKAAKPQFDCEVGKRLEAKVLKKVLNGLEVAILPDEYRA
LLPTMHLSDHISNCLLLWESLKEGDNISNIVCFNKNKNNISLTKKPTVRWSLEEGVVAKD
FSEITVGMQLIGWIKNIMSYGVFVEFPYGLVGLAPKSAMSDKFISDATAAFQMGQTVMAK
VTNLDEEKRRFLVTLKISEVLSPEGDAQTRLINGLQERKAVTEMLAVRDNSDLRQQLAAL
SVGEKLKLTVDNVKDTDATFKSGDLVGATITATKHHVMGVTLTPGQKVTAVILHVDILST
CIHVSILSKLVGKKKSLTEGSKYTAMLQHVDKDFAVISLADTAQLTLIQTSNHLNEIFRS
ETERLKGGMSLAVEVIEPSSLELQGLPLVAWERGGPNRQRTTSENQTGSKGHRFGEIVQG
KVRTVKPTSIQVVLDDGTTGSVHVSEVVEVSEVCQGSFPTSSVKVGSMVTARVIGGREAS
SHRFLPFSHPKYAYSIPELTLIPSKLDKSKDFKPVTGKEKLKSYKVGDEIACFVSKFNPE
RKSLEVTTDPCVTGTVELMAMITDPKDAGHPEKLYKLGSAVYAKVVEVTDKPQRLVLSLT
GVHNLEKGSVTLGMVTNIQPHVGLHVKLPFGGMGTVAVTDLADAYKPKPLDGYKKDQLLR
CFLLANENGKWQLSLRQSRLNPQEAKPVKDIEVLSVDNLTAGQTIRGYIKSVGEQGVFIR
LSRSITGRAQLQQSTKYFVNNHKVLSDHVPPNTLLTTKILSIDKEEELVNLSLLPVDTGK
SDILPESLGLPLRLIGEEKKKHDLLKKKKNKRKLSESEQKQEEAQIPKKKKKTKKAKTDD
SDSGVEVYFREEEDKEDEEDPKSDSVKQVTQSSAGPSRLQVAAGFSWDVGLSSLKPASAA
QEGDSSDGEDQDGSSKPQKKSRHEVEQEKKAAEKALVQREVELMDPSLRPEDAAAFERLL
LASPNSSLLWLQYMAHHLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENMYG
TEESLKKVFERALQFCEPMPVYQQLADIYAKSDKIKEAEGLYKTMVKRFCQNKVVWLSYG
TFLLQQGQSDAASALLQRALKSLPSKESVDVIGKFAQLEFRYGDAEKGRTMFDKVLTSYP
KRTDLWSVFIDLMVKHGSQKDVRALFDRVIHLSVAVKKIKFFFKRYLEYEKKHGTPQSIQ
AVKEKAMEFVEAKGTEAAN
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtggaggaggacttccctcgaggtggtatggcaaagaagcccactgagagt
aaaatagtagtgcagcggacagaggtggacaacttgttccagtcaaacgaacaagtagaa
accaagaaaagaaagggggcagtcaaagatgatggcaagaagtttaagaagcaaaagaca
gacaaaggaaaagaagatgttttgacactgaatgcagcagccaagtgtgtggaaattcta
catatcaagaatgtgaaagagggtatgctgatgctcggctgtgtgaaggaggtagcagac
tttgaggtgacggtcagcctgccttgtggcatgcaaggcttcctcagcatcaagaacatc
tgtgactcgtatgccaagctgctcagtgagcaactggattcagctgacacagaggagatc
tgctctctgcctcacctcttccacactggcatggtggtcaggtgtgtggttgccaagttg
gatgtagccaaaggaggctctctcagcatccagctgtcaatcaacccaaagctgctgaac
aaggctctcacttcaagctccctgaaagctggcatggtcttgagtggatgtgtggacagt
gtggaggatcacggctacatcattgacattggcatcagtggaaccaaagcattcctcccc
aagaaagcagtagaagattcacagaacaattcagatgagctgaaagtgggtcagtatctg
acttgtcaagtggaagaagtaaagaacgacggccgtgtggtccgcctttctgtcagcccc
ccgaccatcgcccaggccagtgctgaatccacgcagggctggaacctcgccaaccttctg
cctggtcttctggtcaaagctacaataaaaaaggtgaccaaacatggtctgctgctggac
ttcctgtcctccttcagtggccatgtggacttcctccacatggagccagaccaggcatcc
agctacactgtgggaaccgaggtgcaagcctgcgtgctgtatgtggagccgtctacccgt
ctggtggccctgagcctgcgcagctacctcgttcaacccgggattagagttgaaacgact
cctgcaggaggagaccgcattggtgaggtggtgaaggaatgcaagatgaccaggatgcat
cacatgtctggagctgtgttggaactgcccgacaaaacgttggcctttgtacataggaac
cacctgaaggagcctaatgtgccagttaatgagaacagattgatggccatgtctgagcac
acctgcaggatcctagacttcagcgccatggaccaaattcattttgctagtctgcgaaag
agtgtgatcgagaggcgtttttatagataccacgatcttcaggccggtcaggttgtggag
gggacagtgtcagtcctgctgaatcacggcatggtggtgcatctgtctgaccacattaag
ggcctggtgccccggactcacctgtctgacatcatcctcaagaacccagagaagaagtac
acggagggcatgaaggtcaaatgtcgggtgctgtcagtggatgcagagtccaagaagctg
tacctgaccagaaagaaggccctggttgaaagctccctgccgttgttcctcagctactct
gatgcacgtcccggctgcgtttctcacggctacatcgtttgcatcaaagactttggctgc
atctttcgtttttacaacaacgtgaagggtctggtgccgctcagggagctcagctctgag
ctcatcatcagtcctgaggaggtcttctatgtgggccaggtgttaaaggcaaaagttatt
cagtgtgatcctgagaaggcaaagatggtgctgtcattcaaggctgcagtggagggagac
ccagagaaagctgccaagccccagtttgactgtgaggtgggaaagaggctggaggcaaag
gttctgaaaaaagtacttaacggtctggaggtggccatcctccctgatgagtaccgtgcc
ttactacctacaatgcacctttctgatcacatctccaactgcctgctgttgtgggagagc
ctgaaggagggagacaacatctcaaacatcgtctgcttcaacaagaacaaaaacaatatt
tccctcaccaagaaaccgaccgtgaggtggtcactggaggagggagtggtggccaaggat
ttctctgaaatcacagtaggaatgcagctgattggctggatcaaaaacatcatgtcttac
ggcgtctttgtagagttcccatacggccttgttggtcttgcacccaagtcggccatgtca
gacaagttcatcagtgatgcgacagctgcctttcagatgggccagacagtcatggctaaa
gtcaccaacctggatgaggaaaagcggcgtttcctggtcacactgaagatttcagaggtc
ttgtctccagagggagatgcacagacgagactcattaatggtctgcaggagagaaaagct
gtgacggaaatgttagctgtgagagataacagtgatctccgccagcagctggctgctctg
tctgttggtgagaagctgaagctgactgtagataatgtgaaggacactgatgccaccttt
aagtcgggtgatttggttggtgcgaccataacggccacaaagcaccatgtcatgggtgtt
accctgaccccagggcagaaagttactgcggtcatcctccatgttgacatcctgtccaca
tgtatccatgtgtccatcctttccaagctggtggggaagaagaaatctttaactgaagga
tcaaagtacacagcgatgttgcagcacgtcgacaaagactttgccgtcatctcactggct
gatacggcacagctgacgctgatccaaaccagcaaccacctgaacgagatatttcggtct
gagacggagaggttgaagggggggatgagtttggccgttgaggttatagaacccagctct
ctggaactgcaggggctccctctagtggcgtgggagcgcggtggcccaaatcgacagcgc
accacctcagagaaccagacgggctctaagggtcacagatttggtgaaattgtgcaaggg
aaagtgcggacagtgaagcctacctcgattcaggtagtactcgacgatggaaccacagga
agcgtgcacgtgtccgaggtggtggaagtttcagaagtgtgtcagggatccttccccacg
tcctcggtcaaagtgggcagcatggtcacagccagggtcatcggaggacgcgaggcctcc
agtcacagattcttgcccttctctcatcccaaatatgcgtacagcattcctgagctcaca
ctcataccaagcaaactggataaaagtaaagattttaaaccagtaacaggaaaagaaaaa
ctaaaaagctataaggtgggggatgaaattgcttgctttgtatcaaagtttaatccagag
aggaagtctttggaggtgaccacagatccttgtgtcactgggacagttgaactgatggcc
atgatcactgatccaaaggacgctggccacccagagaaactctacaagctgggcagtgca
gtctacgccaaagtggtggaagtgaccgacaaacctcagcgcttggtgctgtcactcaca
ggagtccataacctggagaaaggcagtgttactttggggatggtgacaaatattcagcca
catgtcggcctccatgtcaaacttccgtttggcggcatgggcaccgtcgctgtcacagac
ctagctgatgcctacaagcccaaaccgctcgacgggtacaagaaggatcagctgctcagg
tgtttccttcttgcaaatgaaaatggcaagtggcagttgtctctacgtcagtcaaggctg
aacccccaggaggccaagccagtgaaggacatagaggttctgtctgtagacaacctgaca
gcaggccagaccatcagaggctacatcaagtctgtgggagagcagggggtcttcatcagg
ttgtcgaggagcatcacaggaagagcccaacttcagcagtccaccaaatactttgtcaac
aaccacaaggtcctgtctgaccatgttcctccaaacaccctgctcaccaccaagatcctc
agtattgacaaagaggaggagttggtcaacctgtctctgctcccagtggacactgggaag
tcagacatcctcccagagtctctgggtctgccgctgcgtctgatcggagaggagaagaag
aaacacgatcttctgaagaagaagaagaataaacgtaaactgtctgagagcgaacagaaa
caagaagaggcccagatcccgaagaagaagaagaaaacaaagaaagctaagactgatgac
agcgacagcggagtggaggtgtacttcagagaagaggaggataaggaagatgaagaggat
cccaaatctgactctgtaaaacaggtgacgcagagctcagcgggtccatccagactgcag
gtggcagctggtttctcctgggacgtgggactgagctccctgaagcctgcttctgcagca
caggagggagactccagtgacggagaggaccaagacggaagcagcaagccacagaagaag
tctcggcatgaggtggagcaggagaaaaaggcagcagagaaggccctggtgcagcgggaa
gtggagctgatggatcccagcctgcggcccgaggatgcagctgcctttgagcgcctgctc
ctagcttcacccaacagctccctgctttggctccagtacatggctcaccatctacaggcc
actcagatcgagcaggcccgagcagtggctgagagggccctcaaaacgatctccttcagg
gaggagcaggagaagctgaatgtgtgggtggctctgctgaacctggagaacatgtacggc
actgaggagagcctgaagaaagtgtttgagcgggcgctgcagttctgtgagcccatgcct
gtttaccagcagctggccgacatctacgcaaagtcagacaagatcaaggaggctgaaggc
ctgtacaagacgatggtgaagcgtttctgtcagaataaggtggtgtggctgagctacggg
accttcctgctccagcagggtcagagtgatgctgccagtgctctcctgcagagggcgctg
aagagtctgccctccaaagaaagtgtggacgtgatcggaaagtttgctcagctggagttc
cgctatggtgatgcagagaaaggtcgcacaatgtttgacaaagtcctgacaagctacccc
aaacgtacagacctctggtccgtcttcatcgacctcatggtcaaacatggatcacagaag
gatgtcagggcgctctttgatcgtgtgatccacctgagtgttgcagtgaaaaagatcaag
ttcttcttcaagcgttacctggagtatgaaaagaagcacggcaccccacagagcatccag
gcagtcaaagaaaaggccatggagtttgtggaagctaaaggcacagaggctgccaactaa
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integrated database retrieval system
