Semicossyphus pulcher (California sheephead): 138594518
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Entry
138594518 CDS
T10596
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138594518 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
138594518 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138594518 (thoc2)
03041 Spliceosome [BR:
spul03041
]
138594518 (thoc2)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138594518 (thoc2)
Spliceosome [BR:
spul03041
]
Complex C
Other components
EJC/TREX
138594518 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138594518 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
138594518
NCBI-ProteinID:
XP_069521745
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEVRDIQAALYELCWQVVHGNLKL
DLVASVLGEMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDAVIIEEHKRDISE
AKQIARKLVMVVLPSEKNEDKDKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYAASHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVLHPLRNKRAPRPAESFE
DLRRDTFSMLGYLGPHLSHDPILFAKIVRLGKGFMKEHQSDGRADVKDKMDTLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKL
KVQIKAIEDNPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPASSTSKTEEGTSEDGDRGKDKSQGTTKPVNKTNSAAAKVTTSNGNGALNSTKAVK
DRDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKDKGDRSAVAGTLKSPVPRAESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHVNYNSVTRSKSRERELEKKETDN
TQGRSKEKKEEKDRKDRKRDHAVNDREASQESKRKKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEDKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaagagctcacagagaaaacagatcatggaagtgaagttaga
gatatacaggccgccttatacgagctctgctggcaggttgtacacgggaacctgaagttg
gaccttgtcgccagcgtccttggagaaatgatggaactcagagatgacatgccatcaatt
ttagcagatgtgtttagtatactggatttagagactggtgcgctggaagaaaagaacaaa
cgtgaccattacacacagctggtgggagcatgtttgttttttgttccggaggccatcctg
aaggagaggctcgaccctgaaacccttgaatctcttggactcataaaacaagcccatcag
ttcaatcagaagatcgtaaaaatcaagactaaactattttacaagcaacagaagtttaac
ttactaagggaggagaacgagggctatgccaaactaatcactgagcttggccaagacctc
tcgggcaacatcaccagccacatcgtcctggagagcatcaagtccctcataggatgtttt
aacttggaccctaatcgcgttttggacataatcttggaggtgtatgagagtcgatctgac
caggatgagttcttcctgtctctcatcaagtcctacatgtgtgagccgctcaccctttgc
cacatcctgggctttaagttcaaattttaccaggagcctaatgaggaaactcccaagtca
ctttaccacattgctgctgctttgcttcatcataacctgatcgagctggaagatctctac
gtacatctcatgccactagatgccgtcatcatagaggaacacaaacgagatatctcggag
gccaagcagatcgcccgcaagctggtgatggttgtgttgccctcagagaagaatgaagac
aaagacaaggagaaggaaaaggaggaggagaagaatgagaagccccctgataaccagaag
ctgggtctgttggaagcgctgcttagaatcggtgactggcaccacgcccagagtattatg
gaccagatgccttccttctatgctgcttctcacaaggccatcgcactggctctctgccag
ctcgtacacctgactgtggagcctctttacagaagggccggcctccctaaaggcgcacga
ggatgtgtgttgcatccactgaggaacaagcgagcccctcggcctgcagagagcttcgag
gacctacgcagggacactttcagcatgctcggttacctgggccctcacctctcccacgac
cccatcctcttcgccaagatagtgcgcctgggaaagggcttcatgaaagagcaccaaagt
gatggcagagctgatgtcaaagacaaaatggacacactattgagttgtttcctgagcata
gcagaccaggtgcttctcccctctctgtctctgatggagtgtaatgcgtgcatgtctgag
gagctgtggggtctcttcaaactctttccctaccagcacaggtatcggttatatggacag
tggaagaatgagacatattccagccatccactgttggttaaagtcaaagctcaaactgtg
gaacgggccaaatacattatgaagcggttgaccaaagagaatgtgaaacagtctgggagg
cagattggcaagctgagccacagcaatcccaccatcctctttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttccagtggtggactccttgaaatacctcacgtcc
ctcaactatgatgtcttggcctattgcatcattgaggctctggccaaccccgagaaggag
aagatgaagcatgacgacaccaccatctcctcatggcttcagagtctggcgagcctctgc
ggagccgtgttcagaaaatacccgatcgagctggcaggccttctgcagtatgtcaccaat
cagctgaaggcagggaagagctttgatctgttgatcctgaaagaggtggtgcagaaaatg
gccggcattgagatcactgatgagatgacctcagagcagttagaggccatgaccggagga
gagcaactcaaagccgagggcggctacttcggtcagatcaggaacactaagaagtcatcg
cagcggctgaaggatgcgctgctggaccacgaactggccttgcctctttgtttactcatg
gcacagcaaagaaatggagttgttttcttagagggtggagagaaacaccttaaacttgtt
ggtcacctttatgatcagtgtcacgacacgttggtgcagttcggtggctttctggcctcc
aacctgagcacggaggactacatcaagagggtcccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgccttcttcctgtctcggccaatgtacgcccaccagatt
ctgtcgaagtacgatgagctgaagaaagcagagaaaggcaaccggcagcagcagaaggtt
cacaagtatgtggcagcctgtgaacaggtgatgaccccggtgcacgaggctgtggtgtcc
ctgcatccggccagagtgtgggacgacctccgccctcagttctacgccaccttctggtcc
ctcaccatgtacgacctggccgttccgcattctgcctacgatcgagaggtcaacaagctc
aaggtccagatcaaggccatcgaagacaacccggagatccccatgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggagaaactgcaggaggaggagaagaagcagctg
gagcacgtccagcgggttctccaccgcctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccataacaaagttcctgcagctctgtttgttccctcgctgc
atcttctcttccatcgacgccgtgtactgcgcccgctttgtggagctggtccaccagcag
aaaacacccaacttctgcaccctcctgtgctacgacagggtgttctctgccatcatttac
acggtggccagctgtacggagaacgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacggtgacccgttggcacagcgaccgtgccatctatgagaaggagtgcgttaat
taccccggcttcctgaccatcttcagagccaccggcttcgatggagggaacaaagcggat
cagctggattatgagaacttcaggcatgtggtgcacaagtggcactacatgctgacgaag
gcttcagttcactgcctggagacgggagattacacccacatccggaacattctcatcgtg
ctcacaaagatcctgccctgctaccccaaggtcctgaacctgggccaagccctggagtgc
cgcgtccacaagatctgcctcgaggagaaggacaagaggcccgacctctatgccttagca
atgggttattcgggtcgattgaaaagccagaaggtgcacatggtccctgagaatgagttt
caccacaaggagcagccagcgcgcagcgccacccccgccagccaacagaacggccccggc
agcacgggcaagcccgccagcagcaccagcaagacggaggaggggacgtcagaggatgga
gataggggcaaggataaatctcaggggaccacaaagccagtgaacaaaaccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagccgtaaaa
gaccgggacgacaaggagaagagcgggaaggagaaaaaagagaaaaaggagaagacacca
ggcagcactcctgaaacaaaggcggagaaccgtcgggagaagcagagagacgagagggcg
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggccgaggagaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccatggagccatccagggagcgcgacgccatcaaggagtccaagagcaaggacaaagga
gacaggagcgctgtggccgggaccctcaagtcaccagttcccagagcggagtcagccgaa
tctgagagggatcacaaaagacgaaagctcgacagccactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacgtccaagcaccacgtcaactac
aattcagtaacccggtccaagagcagagagagggagctggagaagaaagagacagacaac
acacagggccgatccaaagagaagaaggaagagaaggaccggaaagacaggaaacgagac
cacgctgttaacgaccgcgaggcgagccaagaatccaaacgtaaaaaggacgaaaatgga
accaattcctccaaaaacagcaagagcacgagtccttcctgcgactccccgctgtcagcc
gagaaagagaagagcaaaagatcaaaatcttccagtaaagagaaggcggattctgtgaaa
cctgagcggacgtcctctggaggaaaaaaggagtcccgacacgataaggagaagtctgaa
aagaaagagaagagggacagcagcggcggaaaggaagacaagaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
