Semicossyphus pulcher (California sheephead): 138594543
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Entry
138594543 CDS
T10596
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spul03037
]
138594543 (pkd2)
04040 Ion channels [BR:
spul04040
]
138594543 (pkd2)
Cilium and associated proteins [BR:
spul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138594543 (pkd2)
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138594543 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
138594543
NCBI-ProteinID:
XP_069521773
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MSSSRVRPQQLPQSQTGRLPHRLDSGEGIEMENIQHQDLGLGGVIGTPSPPSRQAWSRDN
PGFEPEDEIMEADWPPASPGRRSVSTASSSSCSSGLGSYTGGGSSTHITRGGLYPTPTVD
AKQQDKHEHLGCMKQILQKIRVLWGTELMEDSDSSRERYLRNVLREMLTYIAFLITLCIL
TYGMVSANMYYYTKVMSQLFLDTQLSAGDPSTFRSLSTMEDFWKFTEGPFLNGMYWEMWY
NNKSLPENQSLIYYENLLLGVPRLRQVKVHNESCSVHDDLRDEVQDCYNMYTPSNEDTTS
FGPKNGTAWVYKTESEMNGSSYWGQVSKYGGGGYYQDLSRTREESAVQLQFLKDHLWLDR
GTRAVFFDFSVYNGNINLFCIARLLVEFPATGGVLTSWEFQTVRLIRYVSSWDYFVGVCE
VAFCLFILYYVVEEVLEIRIHRLHYLKSLWNCLDVLIVVLSVVAIIMNITRTAMVGNLLK
GLLENHTAHPIFEPLANLQIQFNNVAAVIVFFSWVKLFKFINFNKTMSQLSSTMSRCAKD
LVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEETNPVL
GPIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKMR
LKKTAVDDISDSLRQAGGKLNFDVLRQDLKGKGHTDAEIQAIFAKYDQDGDQELTEHEHQ
QMRDDLEKEREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSY
EEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLESMERAKLKRKDVLGRLLDGVMEDERLGR
DTDAHREQMDMLVREELERLESDDMVSQVSHPQTATPVGPRPRPSSSLSADGLDGSASGS
GHV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcccgagtcagaccgcagcagctgccgcagagccagactggcaggttgccg
cacagactcgactcaggagaaggaatagagatggagaatatccagcatcaagacctgggt
ctcggaggagtcattggcactccgtcccctccgtcgagacaagcgtggagtcgtgacaac
ccgggttttgagcccgaggatgagattatggaagccgactggcctccagcgagtcccggg
aggaggtcagtgtctacggcctccagcagcagctgcagcagcggcctgggaagctacacc
ggcgggggcagcagcacccacatcacccgaggaggactgtacccgaccccgactgtggat
gccaagcagcaggacaagcatgagcatttaggctgtatgaagcagatactccaaaagatc
agagttctgtggggcacagagctgatggaggacagtgacagcagccgagaaaggtacctg
aggaacgtactgagggagatgctcacatatatcgcattcctcatcactctctgtatcttg
acctatgggatggtgagtgccaatatgtactactacactaaagtcatgtctcagcttttc
ctggacacacagctgtctgccggggacccttccacttttagaagcctctcaaccatggag
gatttctggaagttcacagagggtcctttccttaacggcatgtactgggagatgtggtac
aacaacaagagcctgccagagaaccagagcctcatctactatgagaacctcctgctcggg
gtgccacgactaaggcaggtcaaagtccacaatgagtcctgctccgtccacgacgatcta
agagacgaggttcaggactgctacaacatgtacaccccatccaacgaggacaccacctcg
tttggccctaagaatgggactgcctgggtgtataagacagagagtgagatgaatgggagc
agttattggggtcaggtgtctaaatacggaggtggaggatactaccaagacctgtctcgt
acgagagaggagtcagctgtccaactgcagtttctcaaagatcacctgtggctggacagg
ggcaccagagcggtctttttcgacttctctgtctacaacgggaacattaacctcttctgc
atcgccaggttgttggtggagtttcctgctactggcggggtactgacctcatgggagttc
caaacagtgcgcctgataagatacgtgtccagctgggactactttgtgggcgtgtgtgag
gtggcattctgtctattcatcctctactacgtggtggaggaggtgctggagatccgcatc
caccgcctgcattacttaaagagcctgtggaactgtctggatgttctcatcgtcgtgttg
agtgttgttgctataataatgaacataaccagaacagccatggttggaaaccttctcaaa
ggcctgttggagaaccacactgctcaccccatctttgagcctttggccaacctgcaaatt
cagttcaacaatgtggctgcagtcatcgtttttttctcctgggtcaagctttttaagttc
atcaacttcaataagaccatgagtcagctctccagcacgatgtcccgctgtgccaaggac
ctggtgggtttcgccatcatgttcttcatcatcttcctggcgtatgctcagctggcttac
ttggtgtttggaactcaagtcaacgatttcagcactttccaagctagcattttcacccag
ttccgcatcattctgggagactttgagttctcagagatagaggagacaaatccagtgctt
gggccgatctacttcaccacctttgtcttcttcattttctttattctaatgaacatgttc
ctggccatcatcaacgacacgtactctgaggtgaaggctgacatgtcgcagcaaaggtct
gagatggaaatgactgacctcattaagaagggttgtaacaaagcgctgatgaaaatgaga
ctgaagaagacggcagtggatgacatctccgacagtttgcgtcaggctgggggcaaactg
aactttgatgttctccgtcaggatcttaaaggaaagggccacacagacgcggagattcag
gccatcttcgccaagtatgatcaagatggcgatcaggagctaacggagcacgaacaccag
caaatgagagacgacctggagaaagagagagaggacttggagctggaacgcaattcgctg
actcgacccagcagtgggcggagcttccctcgtacccaggacgactcggaggaagacgac
gacgaggacagcggccacagctctcgccgacgtggcagcagctcagggggcgtctcttat
gaggagtttcaagtactggtgaggcgagtggacaggatggagcactctatcggcagcatc
gtgtcaaagatagatgctgtgatcgtgaagctggagtccatggagagagctaaactcaag
aggaaggatgtgctgggccggctgctggacggagtcatggaggatgagcgcctgggtcgg
gacacagacgctcacagggagcagatggatatgctggtgagggaggaactggagcgtctg
gagtctgatgacatggtgtcacaggtcagccacccgcagacagccactcccgtcggcccc
cggccccgtccctcctcttcgttgtctgccgacggcctcgatgggagcgcaagcgggagc
ggccatgtgtga
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