Semicossyphus pulcher (California sheephead): 138594733
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Entry
138594733 CDS
T10596
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138594733 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138594733 (zcchc7)
03016 Transfer RNA biogenesis [BR:
spul03016
]
138594733 (zcchc7)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
138594733 (zcchc7)
Transfer RNA biogenesis [BR:
spul03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
138594733 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Zn_ribbon_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
138594733
NCBI-ProteinID:
XP_069522040
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MYCMYQDREELEDDLYQEDDADSDGSEAESELEFHLYSQLHYSSNAGDMGEQEENGEEAE
GQDSQQPEVMENTADVDREQEHTEESRPPSPDMSQLRKHLKKKQKKEKSKPKGQRSSSLF
EEVIVIDSSPDVISISEGDSADDDEGVCALKGQGVGRLQTSTPAGQGAQKRLNVPLTVDS
SSSDSDSQESESKSESESADSSDSSDSDGLENWMILGRGKQDEDHSISLNLEGGSDSNAD
ADVDGSWLVSDRDKEARIYNKDKGARAAVQRLPNRYYTSKNVQCRNCNKNGHLSKNCLEP
KKLLPCFLCGTPGHLSSECPNRHCNNCGLPGHFYNSCSERAYWHKQCHRCSMTGHFFDAC
PDIWRQYHITTKAGVPVKQRGEDEGRSPAYCYNCSRKGHFGHACTRQRMFNGTYPSSPFI
NHYDNTMDINRRQHRMKMKVKDLKKNGFFPAGPQTPLNPAPPKKKQKLNHHTNDHKPNRT
PHQSPNNHKPSPSHIFFKDSHDYKGSAAKTHKHNKYKQQESSGNVKPWKPKRPVPTSRDP
PPKLILDEADDFPRGGGKGESMEMKKKRNRMKKTKQVPSGPQRGHRDSRPDRLCWTVTGD
MKGSRQEKGEKKRRWRSRGRGDTNKKLDDQMYPTDENLFVIKQKRKRSR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtatgtaccaggaccgggaggagttggaggatgatctttatcaagaggatgat
gccgactccgatgggtccgaggcagaaagcgagctggagttccacctctacagccagctc
cactactcctccaatgccggggacatgggggagcaggaggagaacggagaggaggcggag
ggccaggacagccagcagccagaggtgatggagaacactgcagatgttgacagagagcag
gaacacactgaagaaagtaggcctccttcacctgacatgagccagttacggaaacacctg
aagaagaaacagaagaaggagaaaagtaaacccaaaggtcagaggtcatcatcacttttt
gaggaggtcattgtgattgactccagccctgatgtcatctccatctctgagggggacagt
gctgatgatgatgaaggtgtctgtgccctaaagggtcaaggcgttggaaggttgcagacc
tccaccccagctggacagggagcccaaaaacgtctcaacgtgccgttgactgtggactcc
agcagctcagattctgattcacaagagtcggaatcaaagtcggagtctgaatcggccgat
tcctccgattcgtcggattcggatggtctggagaactggatgatcctgggtcgagggaag
caggatgaagaccactccatctcactcaacctggagggagggtcggacagcaatgcagat
gctgacgtggacggcagctggttggtttctgacagggacaaggaggctcggatctataac
aaagacaaaggagccagggcagcggtgcagcggctgcctaacagatactacaccagcaag
aacgtccagtgtagaaactgcaacaagaacggacatctctccaagaactgcctcgagccc
aaaaaactgttgccctgcttcctctgcggcaccccgggccacttgagtagtgaatgtccc
aacaggcactgcaacaactgcggcctgccgggccacttctacaactcgtgcagcgagagg
gcatactggcacaaacagtgccaccgctgcagcatgaccggacacttctttgacgcctgt
ccagatatctggagacagtatcacatcacgactaaggccggtgttcctgtgaagcagcgt
ggagaagacgagggtcgaagtcccgcctactgctacaactgctccaggaaaggacacttt
ggccatgcgtgtacacggcagaggatgttcaacgggacgtatcccagctccccgttcatc
aaccactacgacaacacgatggacatcaaccgcagacaacacaggatgaagatgaaggtt
aaagatctgaagaagaacggctttttccctgctggtcctcagacccctctcaatccggca
ccacccaagaagaaacagaaactgaaccatcacacaaacgaccacaagcctaaccgcacg
cctcaccaaagccccaacaaccacaagccaagcccaagtcacatcttttttaaagacagc
catgactataaaggctcagcagccaaaacacataagcacaataagtacaaacaacaggaa
agcagtggcaacgttaaaccgtggaaaccgaaaagacctgtgcccacctccagagaccca
ccacctaaactgattttggatgaagcagatgactttccccgaggcgggggaaaaggagag
agcatggagatgaagaagaagaggaacaggatgaagaaaacaaagcaagttccctcaggg
ccacaaaggggacaccgagacagcaggccggaccggctctgctggactgtaaccggagac
atgaaggggtcaaggcaggagaaaggagagaagaagaggaggtggagaagtcgaggcaga
ggggacactaacaaaaaacttgatgatcagatgtacccgactgatgagaacctgtttgtt
atcaaacagaagaggaaacggagcagatag
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integrated database retrieval system
