KEGG   Semicossyphus pulcher (California sheephead): 138594835
Entry
138594835         CDS       T10596                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
spul  Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:spul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spul03041]
    138594835
Spliceosome [BR:spul03041]
 Complex B
  Other components
   Complex B specific factors
    138594835
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_WDR75_1st Ge1_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_VPS8 TFIIIC_delta Mala_s_1-like VPS8_N DUF5896 DUF7165 WDR54 LisH
Other DBs
NCBI-GeneID: 138594835
NCBI-ProteinID: XP_069522179
LinkDB
Position
Unknown
AA seq 531 aa
MAAEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERFLHLENL
LTSSYFDPREAYPKGSSKEKRRRAIAEALSREVSVVPPSRLVGLLDEVGVSIVINISLTA
PFHVSCHACSSQTMRLQQSPDSSPDSTLDSYGSKDRQTEKESFPTQLYRHIKFGRRSHVE
CARFSPDGKYLFTGSVDGFIEVWNYTTGKISKDLKYQAQDSFMMMDDAVLCMCFSQDTDL
LATGAQNGKIKVWKIQSGLCLRRFEHAHNKGVTCLSFSKDNNQILSASFNPTIRIHELRS
GKTLKELNGHSSFVNDASFSQDGSHIISASSDGTVKIWNTKSCECVHTFKSLASDVPVNN
VIPLPQNPEHFVICNHSNTVVVINIHGQTVKTFTLDRKEGADFVSCTLSPRGEWIYCVGE
DMVLYCFNYMTGRLKKTLTVHEKDVIGITHHPYENLLATYSEDGLLRLWKP
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggcagcagagatggagccctcggacgtgatccgcctgataatgcagtacctgaaggag
aacaacctgtaccgaaccctgaccaccctgcaggaggagaccaccgtctctctgaacacg
gtggaaagtatcgacagcttcatcgcagatataaagagcggtcactgggactcggtcctg
ctggccatcgagtccctcaagttacccgacaacacactgatcgacctttatgagcaggtc
gtgatggagctgattgaaatgagggaagtgggtgcagcccgctcgctcctcagacaaacc
gaccccatgatcatgttgaagcagacgcagccggagaggttcctccacctggaaaacctg
ctcacaagctcctactttgaccctcgggaggcgtaccccaaaggcagcagcaaggagaag
cggcgcagagccattgccgaggctctgtcgagggaagtcagcgtggtgcctccttcacgc
ctggtggggctcctggatgaagttggtgtgagtatcgtgatcaatatctccctcacagca
ccttttcacgtttcctgtcatgcctgttcctcacagactatgaggctgcagcagtctccg
gacagctcccccgactccaccctcgactcgtacggcagcaaagacagacagacggagaag
gagagctttcccacccagctgtaccgacacatcaagtttggacgacggtctcatgtggag
tgtgcacgtttctctcctgatggcaagtacctgtttactggatcggtggacggattcatc
gaggtctggaactacaccacgggaaaaattagtaaagatctgaagtatcaggcccaagac
agcttcatgatgatggacgacgctgtgctgtgtatgtgcttcagtcaggacacagatctt
ctagcaactggagctcagaatggcaaaataaaggtgtggaagatccagagcggcttgtgt
ctgcgcaggtttgagcacgcccacaacaaaggtgtcacctgtctgagcttctccaaggac
aacaaccagatcctgagcgcctcctttaacccgaccatcagaatccatgaactgaggtca
ggcaagacgctaaaggagctaaacggccattcatcgtttgtaaatgatgcttctttctct
caagacggatcgcacatcatcagcgcctcatctgatggcacagttaagatttggaacaca
aagtcctgcgaatgcgtccacacattcaaatctctggcctcagacgtccccgtcaacaac
gtgattcctctcccgcaaaacccagagcactttgtcatctgtaaccactccaacacggtg
gtcgtcatcaacatacacggtcagactgtaaagaccttcaccttggacagaaaggaggga
gccgactttgttagctgcaccctgtcaccccgcggggagtggatttactgtgtgggagag
gacatggtgctgtactgcttcaactacatgacaggaaggctaaagaaaacgctgactgtt
cacgagaaagatgtgatcggcatcactcaccacccgtatgagaatctgctcgccacatac
agcgaggacggccttctgaggctatggaaaccttaa

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