KEGG   Semicossyphus pulcher (California sheephead): 138594840
Entry
138594840         CDS       T10596                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:spul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    138594840 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spul03021]
    138594840 (taf5l)
   03036 Chromosome and associated proteins [BR:spul03036]
    138594840 (taf5l)
Transcription machinery [BR:spul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     138594840 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     138594840 (taf5l)
Chromosome and associated proteins [BR:spul03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     138594840 (taf5l)
    STAGA complex
     138594840 (taf5l)
    TFTC complex
     138594840 (taf5l)
    SAGA complex
     138594840 (taf5l)
    SLIK complex
     138594840 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th NBCH_WD40 DSE1_N Beta-prop_RIG_2nd PAC11 ANAPC4_WD40 CFAP251_N Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_NOL10_N RMC1_N Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SPT8 Tricorn_2nd Beta-prop_Vps41 Beta-prop_DCAF4 ASA1 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN WD40_like WD_LRWD1 Beta-prop_IP5PC_F Nbas_N BCAS3_WD40 PD40 Beta-prop_ELP1_1st TRIP13_N Lysis_col
Other DBs
NCBI-GeneID: 138594840
NCBI-ProteinID: XP_069522190
LinkDB
Position
Unknown
AA seq 600 aa
MKRVRTEQIQHAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYEAQFLRLRSFLSETDISWAKEVSSILYPLFVYLHLDMVQCGLKGAVDGFYS
RFHGAFLQDSEQRTTIEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRALSTHLQLEVTASRRTDYQLYGAAGGATAVPNSTSSWAGVDGAEGGEGVEVP
AGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLSAGFDS
STVKLWSLRARKLKAKPHQADVSLIHLACDVLEEEADEEDGSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLSSGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHGGTPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKTEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgcactgagcagatccagcatgcagtggctcagtacctgaagcggagg
cagtatgtggacactgatggttccttaaaaggagccaagctcttccagtcagctgaggag
atggctgccagcctcacagtgcagacagagtcaggatgtgccaacatcgtctctgctgcc
ccctgccagtctgacccgcagcagtatgaggctcagttcttgaggctgcgctcctttctg
tcagaaacagacatatcgtgggcaaaggaggtgagcagcatcctctacccgctcttcgtc
tacctccacctggacatggtgcagtgcggcctgaagggggcagtagatggtttttacagt
cgtttccatggcgcatttcttcaggacagcgagcagcgtactaccatagagcagctccgc
catgttctcactgctcaggacgttgctgccaaccccaagctgagcgctttcctagagcac
aagtacgtggttcacctgacggagccggcctacagctacctgctgcgctacctgcagagc
gaggacaacagcgccctctgcagggccttgagcacacacctgcagcttgaggtcactgca
tcaaggcgtacagactaccagctgtacggagctgcaggtggggcgaccgccgtcccaaac
tctacctcctcctgggcgggagtggatggagcggagggtggggagggggtggaggtccct
gcagggatcccacagagtgaggcagccctggaggctctgcaggactgtatcaagaaagtc
cgtgagggcccccccacgctcaccaccgtgtgtttttacgccttccaccacacagaacag
atgttgaacactgccgaggtctcggctgacagccggctgctgagcgccggcttcgacagc
tctaccgtgaagctgtggagcctccgagccagaaagctgaaggccaaaccgcatcaggct
gacgtgtcgctcatccacctggcctgtgacgtgctggaggaggaagcggatgaagaggac
ggctcgggcagcgagatcaagacgttgcgaggtcacagcggccctgtgtttcgtaccgcc
ttcctgacagacagctccggcctgctctcctgctctgaggacacaaccatccgctactgg
gacctgggcagcttcaccaacacggcgctctaccagggccacgcctaccccgtgtgggac
gtggacgtcagcccctgcagcctctactttgccagcggctcccatgatcgcacggcccgc
ctatggacgttctcccgcacctacccgctgcggctctatgccgggcatcttgccgatgtc
gactgcgtcaaattccacccaaactccaactacctggccactggctctacagacaagact
gtgcgtctgtggagcacccagcagggggcgtctgttcgcctcttcaccggccaccgtggc
ccagtgctgtccctcgccttctcacctaatgggaagtacttggcgtctgccggtgaggac
cagagggtgaagctgtgggacttatcctcagggacgttgttcaaagacctgcggggacac
acggacagcgtcaccagcctgtctttcagcccggacagcagcctggtggcgtcgtcctct
atggacaactcggtgcgggtttgggacatcaggaactcacacggcgggacgccagccgac
ggctcgtccagcgagctagtgggactgtacactggaaacaccagcaacgtgctgaacgtc
cagttcatggcctgcaacctgctgctggtgacgggaactgcacaggagaaaacggaacag
tag

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