Semicossyphus pulcher (California sheephead): 138594892
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Entry
138594892 CDS
T10596
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04517
IgSF CAM signaling
spul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138594892
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138594892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spul04812
]
138594892
Cytoskeleton proteins [BR:
spul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138594892
Intermediate filaments
Intermediate filament-binding proteins
138594892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PMC2NT
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
138594892
NCBI-ProteinID:
XP_069522266
LinkDB
All DBs
Position
Unknown
AA seq
2348 aa
AA seq
DB search
MMTTVAAEFDHMELQQQYSSSNDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVD
KALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKD
ALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNA
FNLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNA
IETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLLGVQQQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQ
EKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEER
VQAVVAVAKELEVEHYHDIKRVTARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEM
LYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNANKYSVN
DDGYKPCDPQVIQDRVSHLEFSYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREK
EQILSSVEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVEASHFASAKIQD
RIADLQAQWAALEQLAVVRKKRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEF
STQALVRKHKDAAAEVASYRPVIDALHEQAASLPKEDTESEEVRGRLAGIEERYKEVSEL
TKLRKQALQDALALYKMFSEANACEVWIDEKEQWLNSMEIPEKLEDLEVVQHRFESLEPE
MNNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGV
QNYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRG
EAERLAEEHPDQAKAITGRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSW
LSRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQY
MFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEM
PTTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINAERIQERVASIDNRH
KKNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQ
AFMAELQSNKEWLDKIQKDGMLLVSEKPETEAVVKEKLSALHTMWAELESTTQTKAQCLF
DANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVV
ELQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRRRRNFLVASREVHQFNRDVEDE
ILWVQERMPVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSASLLQDESS
GAEVIRQRLAGLQELWRQLREEAERRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSE
EKAKDEQSAVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDK
LYAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQE
RFREFARDTGNIGQERVDAVNRLADELINTGHGDAATVAEWKDGLNEAWADLLELIDTRT
QILAASFELHKFYHDAKEILGRILDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGT
QVRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRSLLEACEGRRLRLLDTGDKFRFFS
MVRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLL
ARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEP
YLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMR
KPPTPEPPVIQQEETQQQSGVITQNGLPSDQDSPRDGVDGGDLMNGVAERSSKEPSPGAS
PTPGRKSKTSQSSTLPSKNQDSCSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQEM
GFYKDSKAAGQGIPYHNEVPISLKEATCDVASEYKKKKHVFKLRVTDGNEYLFQAKDEEE
MSTWIQAILNACVDRSSVQGSHPGTPVSGRAQTLPATVTLTTESSPGKREKDKEKEKDKR
FSLFKKKQ
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgagttcgaccacatggagctgcagcagcagtacagcagc
agcaacgacacggtcaacaaccgctgggacgatgactgggacaacgagaacagctcggcc
cgcctctttgaacgctcccgcatcaaggcgctcgcagatgagcgtgaggcggtgcagaag
aagaccttcactaaatgggtgaactctcacctgtccagagtctcctgcaggatcacagac
ctgtacatggacctgagagatggacgcatgctcatcaagctgctggaggtcctgtccgga
gagagactgccgaagcccaccaaaggccggatgcggatccactgcctggagaacgtggac
aaagctctgcagttcctgaaggagcagcgggttcacctggagaacatgggatcacatgac
atcgtggacggaaaccaccgactgacgctgggcctgatctggaccatcatcctccgcttc
cagattcaggacatcagcgtggagactgaagacaacaaagagaagagatcagctaaagac
gctctgctgctctggtgtcagatgaagacggcagggtatcccaacgtgaacatccacaac
ttcacaaccagctggagagacgggatggccttcaacgccctcatccacaaacacagaccc
gatctgatcgactttgacaagctgaagaagtccaacgctcactacaacctgcagaacgcc
ttcaacctggcagagcaacacctgggcctcaccaagctgctcgaccccgaggatatcagc
gtggatcatcccgatgagaagtcggtcatcacctacgtggtgacgtattatcactacttc
tccaagatgaaggctctgaaggttgagggcaaacgaatcgggaaggtgttggacaacgcc
atcgagacggagaagatgatcgagaagtacgagtctctggcctcagacctgctggagtgg
atcgaacagaccatcatcatcctcaacaacaggaagttcgccaactctctgctcggagtc
cagcagcagctccaggccttcaacacctacagaactgtggaaaaacctccaaagttcaca
gagaagggaaacctggaggttcttctcttcaccatccagagtaagatgagagccaacaac
cagaaggtgtacatgccccgagagggaaaactcatctcagacattaacaaggcctgggag
cgactggaaaaggcggagcatgagagggagctggctctgaggacggagctgattcgtcag
gagaaactggaacaactggccagacgcttcgaccgcaaggccgcgatgagagagacctgg
ctgagcgagaaccagagactggtgtcacaggacaactttggtttcgacctccaggccgtc
gaggcagctaccaagaagcatgaggcgattgagacggacattgcagcatacgaggagcgt
gttcaggctgtggttgccgtggcgaaggagctggaagtggagcactaccatgacatcaaa
cgagtcacagccaggaaggacaacgtgatccgactgtgggagtacctgctggagctgctg
aaggcccgcaggcagaggctggagatgaacctgggcctgcagagagtctttcaggagatg
ctctacatcatggactggatggacgaaatgaagatgttgctgctgtctcaggattatggg
aagcatctgttgggtgtggaggacctgctgcagaaacacgccctggtggaggctgacatc
gccatccaggctgaccgggtgaaggccgtctccaccaacgccaacaagtactctgtcaac
gacgacggctacaagccctgcgaccctcaggtcatccaggaccgggtctcccacctagag
ttcagctaccaggagctgacccagctggctgctgagcgccgtgcccgcttggaggagtcc
cgtcgtctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaag
gagcagattctgtcctctgtcgagcacggcaaggacctgacaggggcactgcgcctcctc
agccagcagcgagctttagaggatgagatgagtggtcgtgcaggacacctgcagcacact
atcgcagagggccaggccatggtggaagccagccactttgcctctgcaaagatccaggac
cgtattgcagacctgcaggctcagtgggcggcgctggagcagctggcggtagtgaggaag
aagagactggaggaagctctggcactgcaccagtttcaggctgatgcagacgatgtggac
gcctggaccctggatgccctgcgcatcgtctccagtggagagactggccatgacgagttc
tccacccaggctctggtcaggaagcacaaagatgcagcggcagaggtggccagttaccgt
ccagtcattgacgccctacatgagcaggccgcctccctgcctaaagaggacaccgagtct
gaggaggtgcgtggtcgactggctggtattgaggaacgctacaaagaggtttcagagctg
acgaagctgaggaagcaggcactgcaggacgctctggcgctctacaagatgttcagcgag
gccaatgcctgcgaggtctggattgacgagaaggagcagtggctgaacagcatggagatc
cctgagaagctggaggacctggaggtcgtccagcacaggtttgagagtctggagccggag
atgaacaaccaggcgtctcgtgttgcagtggtgaaccagatcgctcggcagctgatgcac
aacggtcacccgagcgaaaaggacatcaagacccagcaagacaaactcaacaacaggtgg
agccagttccgcgatctggtggaccagaagaaggagtccttgaattcagctctgggggtg
cagaactaccacctcgactgcaacgagactaagtcctggatcaaagagaagaccaaagtc
atcgaatccacccaggagctgggcaacgacctaactggggtcatggccctgcagcgcaaa
ctgactggtatggagcgtgacctggccgccatcgaggacaaactgggagatctgcgaggc
gaggctgagcggctggcagaggagcatcctgaccaggccaaggctatcacaggccggctg
gctgagatcaccgcggtctgggaggagatgaagaacactctgaagaaccgtgaagagtct
ctgggcgaggctaggaagctgcagcagttcctgcgtgagctggacgacttccagtcctgg
ttgtcccgcactcagaccgccatcgcctccgaggacatgcccaacacgctggctgaggcc
gagaagctcatggcccagcacgaaggaatcaagaatgagatccagaattatgaggaggac
taccagaagatgcgtgacatgggcgagatggtgacacaaggccagacggatgcgcagtac
atgttcctgcgtcagcggctgcaggcgctcgacactggctggaacgagctgcacaagatg
tgggagaaccgacagaacctgctgtcccagtcccacgcttaccagctgttcctcagggac
accaagcaggccgaggccttcctcaacaaccaggagtacgtccttgctcacactgagatg
cccaccactctggagggtgccgaagccgccatcaagaagcaggaggacttcatgaccacc
atggacgccaacgaagacaagatcaacggcgtggtagaggccggcaggcgcctggccagc
gacgggaacatcaatgccgaacgaatccaggagagagtcgcctccatcgacaacaggcat
aagaagaacagggaggctgcagtggagctgctgatgagactgaaggacaacagagacctg
cagaagttcctgcaggactgccaggagctgtctctgtggatcaatgagaagatgctcaca
gcccaggacatgacgtacgacgaggcgaggaacctgcacagcaagtggctgaagcaccag
gccttcatggccgagctgcagtccaacaaagagtggctcgacaagatccagaaggacggc
atgctgctggtgtcggagaagccggagacggaggcggtggtgaaggagaagctgtcggcg
cttcacaccatgtgggcggagctggagtcgaccacgcagaccaaagctcagtgtctgttc
gatgctaacaaggccgagctgttcactcagagctgcgctgacctcgataagtggctgggt
ggtctggagggtcagatccagtctgatgactacggcaaagacctgacgtccgtcaacatc
ctgctcaaaaaacagcagatgctggagaaccaggtggaggtgcgtcaaagggaggtggtg
gagctgcagagccaggtgaaggctctgggtcaggaggtgaaggacacggacgaggtggac
gggcggaggcaggtggtggagaagaagttccaggagctgctggagccgctgcgacgccgc
aggaacttcctggtggcgtctcgagaggttcaccagttcaaccgagacgtggaggacgag
atcctgtgggttcaggagaggatgcctgtggccacgtccaccgaccacggacacaacctg
cagaccgtccagctgctcatcaagaagaaccagactctgcagaaggagatccagggtcat
cagcctcgtatcgacgacatcctggagcgcagcgcgagcctcctgcaggacgagtcgtcc
ggcgccgaggtgatccggcagcgcctggccggcctgcaggagctgtggaggcagctgaga
gaggaggcggagcggcgccacggccggctggaggaggcgcacaaagctcagcagtactac
ttcgacgctgccgaggccgaggcctggatgagcgagcaggagctgtacatgatgtcagag
gagaaagccaaggacgagcagagtgctgttaccatgcagaagaagcatcagatcgtggag
caggcggtggaggactacgccgagaccgtccaccagctgtccaagaccagcagaggtctg
gtagctgacggacaccctgagagtgagcgtatcagcatgcggcagtctcaggtggataag
ctgtatgccggtctgaaggacctgtcagaggagaggcggggcaaactggacgagaggctc
cgcctcttccagctgaaccgtgaggtggacgacctggagcagtggatcgctgagagggag
gtggtggccgggtcgcacgagctgggacaggactacgagcacgtcactatgttgcaggag
cgcttccgggagtttgctcgggacacggggaacatcggtcaggagcgcgtggacgccgtt
aaccgtctggctgacgagctgatcaacacgggtcatggcgacgcagcgacagtggccgag
tggaaggacgggctgaacgaggcgtgggccgacctgctcgagctcatcgacaccaggacg
cagatcctcgccgcctccttcgagctccataagttctaccatgacgccaaggagatcctg
ggacgcatcctggacaaacagaagaagctgccggaggaggtcggccgcgaccagaacacg
gtggagacgctgcagaggatgcacaccaccttcgaacacgacatccaggccctgggaaca
caggtgaggcagctgcaggaggacgcggtgcgcctccagtcggcatacgccggagacaaa
gctgacgacatccagcggagggagagcgaggtgctggaggcctggaggagtctgctggag
gcctgcgagggacgccggctccgcctcctcgacaccggagacaagttccggttcttcagc
atggtgcgagacctgatgctgtggatggaggacgtgatccggctcatcgaggcccaggag
aacccccgggacgtgtcgtctgtggagctgctgatgaacaatcatcagggcatcaaggcc
gagatcgatgcccggaacgacagcttcactgcctgcattgagctggggaaatccctgctg
gccagaaaacactacgcttcagaggagatcaaagagaagttgctgcagctgactgataag
aggaaagagatgattgacaagtgggaggaccgatgggagtggctacgactcatcctggag
gtgcaccagttctcccgggacgcgggcgtggccgaggcgtggctgctgggtcaggagccc
tacctgtcgagcagggagatgggtcagagcgtggacgaggtggagaagctcattaaacgc
cacgaggctttcgagaagtccgccgccacctgggaggagcgcttctctgctttggagagg
ctcactacgctggagctgctggaggtgaggaggcagcaggaggaggaggagaggatgagg
aagcccccgactcctgagcctccggtcatccagcaggaggagacgcagcagcagagcggg
gtgatcactcagaacggcctcccctcggaccaggactctccccgggacggcgtggacggc
ggcgacctgatgaacggcgtggccgaacgcagctcgaaggagccgagccccggtgcctcc
ccgacccccggcaggaagagcaaaaccagccagtcgtccacgctgccctccaagaaccag
gactcgtgctcccagctggagggcctcctgcaccgcaagcacgagtgggagggccacaac
aagaaggcctccaacaggtcgtggcacaacgtgtactgtgtcatcaacaaccaggagatg
ggtttctacaaagacagcaaggcggcgggtcagggcatcccgtaccacaacgaggtcccc
atcagcctgaaggaggcgacgtgtgatgtggcctccgagtacaagaagaagaagcacgtc
ttcaaactcagagtcactgatggaaacgagtatctgttccaagccaaagatgaggaggag
atgagcacctggatccaggccatcctgaacgcctgcgtggaccgctccagcgtgcagggc
agccaccccggcacgccggtgtctgggcgtgctcagactctgccggccaccgtcacgctc
actaccgagtcgagtcccggcaagagagagaaggacaaagagaaggagaaggacaaacgc
ttcagtctgttcaagaagaagcagtaa
DBGET
integrated database retrieval system
