Semicossyphus pulcher (California sheephead): 138595021
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Entry
138595021 CDS
T10596
Symbol
dchs2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138595021 (dchs2)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Cadherin related
138595021 (dchs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
PepSY
CADH_Y-type_LIR
Motile_Sperm
Motif
Other DBs
NCBI-GeneID:
138595021
NCBI-ProteinID:
XP_069522441
LinkDB
All DBs
Position
Unknown
AA seq
2486 aa
AA seq
DB search
MESVSYRISSGDPQGLFSVHPKSGLISNVKPLDHESQPYALLVLQSYTDSSPVYSTTQVN
ITIADVNDNAPVFPKLRDAITVSQNTLPGTVLFIAHAHDYDSGANGRVQYYLRSSRNSLF
VVDPNFGTVTLNQSLQVDSQQRFSLEIIAEDEGEPSLSSTLTLTVNVDRTAAEDSLAFET
LVYQVEIGEGYRKDSRVIQVRAHKSRGAHMSGIVYSSEQEAGFPPAPFRVHPKTGWLYLS
ESLDYETESVFRFRVVATSREASLVNMTATATVTVLVLDVNDNAPLFSREVYYFTVSEGA
SPRGLVGTVKAVDEDSGKNAQLSYILLSDGKFFRINAKTGEIINWVALDREQHSQHSLKV
MVTDQGHPRLNATAAVHIMVTDINDNMPQFTHLPASKELSVQIWAGLPAGSLVTNMFAKD
LDAGENGTVTFSLLAVHATFCFRAFPQVYAVGLEEEASGHFEIDSESGDVRTTEVFTLGA
ETYYTLRVSVKDGGVPALEDTAVIHVQVHGLEGLYGRSDHQIVRRFTVKEDTEPGTVIGS
ASVSDKGNLHYSVSEGDGNVHFGIDGSSGDIYINQPLDFESAAQYFLLVRAEDGRLAPGV
NVSVLVSVMVEDVNDHTPWFPDNVVTFGLWEDAAVGSLVIAFHARDADGTFPNSALRYSL
TFDPGSSSRFPFQINPYTGSLTVKAPLDRETTPSYAFTVTATDQAKRKEERKQASVTAQV
FLLDVNDNRPVFVSADAVQAMEDVEVGSLLHHFVAIDGDQGENGVVSYVIFAGNKRGFFT
LEEKTGLLFLSAPLDYETHRLHRLTVRAVDHGRPSLSSTQTLTVEVGDVNDQKPVFSQSV
YNASVAENRDPGEPVTRVSATDDDSEENAVVWYSLLPGPGYELFSINPYTGLITTTSYLD
REEHQQFTLRVQARDSSTRPLSGTATVLCSVLDDNDNPPEFMQSSFQISLPENLSPGVVH
TAQASDPDHGENGTIHYSILGEDYRGRFTINSHTGAVSTTQLLDREEVQNYTLTIQARDY
GPNPLSSSTELQLLLLDQNDNIPSFNRKSYHASISEGLPGGTQVLQVSAFDPDEGSNGDV
TYSLMDDSSQGAFSVDPLTGVIRTTRVLDRESRASYTIRALATDSCTLGPLSSMATVSIQ
VEDVNDNVPVCDENPINAWVSMRTLPNEIVTTVTATDGDQGDNGTIRFTLSDEENLFDIG
SESGEISLRRRVRAGFSGRKLQVVVSDRGRPPLTSTCLFFIHLKGEHEGLQFTNKVYNAT
VKENSRAGTWIAKVEASDPTNSRQRITYTIFSGNENLMFSISRQTGEIRVQKDNSLDFEA
SPQIQLVVLADNGLQTAHCRVSISLLDVNDNAPVFEHGSYRTAVWEGQVHNTYVMQVFAS
DADSGMNGQIEYSIVSGNTNGAFVLDSVRGILATNVLLDREITPSYKYANPTLVLQAADR
GNPSLSSTTTIRVQVVDVNDNSPAIPPMEPVLIAENLPAGYMVTQVTANDVDLSSTITYS
FSDNSSTNAPFAIDRYTGVVTLTRALDYEEETEYALTVWASDYLHQTTGEVKVQVLDVND
NAPVFTKVSYQVELSELVSADTLVLSVSATDRDSGLNGKITYRLLSSPLQGFYIQPENGS
VFTNKPLKAITNNNLIHLLVEAKDEGDPVQSAVTSIDVQITDTNDHEPLFHQDIYTLTVP
EDTPTDTTLLTLSAEDQDWSPENTHLDYAIIRGNEEKRFCLEVKMVQVDSQMRNVGKVVL
CNPLDREITESYALTVSVSDRGTPPLNSSAVVMVTVTDCNDNAPVFSSTEYHTQVSENSH
VGTRLVQVSAQDPDLGTNGLLRYDIISGNSKGHLKLHPQSGLLVVNHSLDYEEDSKYTLT
VRASDGGESPEERKVAFTVVFITVLDENDNTPYFMFPAVYCTVLENLPAFTHTCSVHAVD
NDLGPYGQLTYSILSSCFMDYGSGSPEKKEAFAIDSLTGDIHTRQTFDYERESEYCFVVE
ARDKGDKAATVRVQVSIKGVDEFSPVFTQKQYHFLLPENAKPGETVGYVMAMDHDGGLDG
LVEYSLVKSSPFFSINKTIGAIFVSGPVYRRRGSRADEDVVKLVVSAGSPRLASRTTNCL
VFVNISSSAEALTGVPLDVHMLSLSVSLIMFLLVLLLFVCLVLRYKLKEAAIKKAIAANL
NHGSGSFCRSSSGTLSPISLQEIQRRGIPVTTRDISNPYFQSDSSGRGSAEGETAEDQEI
KWINDYPCRKRDESSEDNQIMEIPDSALDADTISCHSIDVGPEHILSINKCLVSGMASTE
SLHHFKEEGGGEGLLPAILRVRDLEECMRTNGYAPLSEAHASADSLSSLLCLEEQLLGSY
GCDYVLDWEPRFQTLASVFNDIGMLPDEELQGGREDLAAEASCLMYPPPLITGVAQPGIR
TVPPRKPVRMPSLSRRRSCRKYAYSPLARNTGLTPSVMTPTFSPSLTSLTVRTPSASPVV
SETGVAGIRLDSGPLTASLLEAEIQV
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagtgtcctacagaatctcctctggagaccctcagggtttgttctccgtccat
ccaaagtccggcctgatcagcaacgtcaaacctctggaccacgagtcgcagccgtacgcc
ctgctggtccttcagtcctacactgactcctctccggtttacagcaccacacaggtcaac
atcacaatcgctgacgtcaatgacaacgctcctgttttccccaaactcagagacgccatc
acggtgtctcagaacacactcccagggacggtgctgttcatcgctcacgcacacgactac
gacagcggtgccaacgggcgggtgcagtattacctgagaagtagcagaaatagcctgttt
gtcgttgatccaaactttggcacagttactttaaatcagagtttacaggtggattctcag
cagaggttcagcctggaaattatcgctgaagatgaaggagagccgtccctgagctccaca
ctgaccctcactgtgaatgtggaccgcaccgccgcagaggacagcttggcctttgagacg
ttggtgtaccaggtggagatcggcgagggctacaggaaagactcgagggtcatacaggtg
agggcgcacaagagccggggagctcatatgtcaggaatcgtgtattcctcggaacaagag
gctggattccctcctgctccgttccgggttcacccaaagaccgggtggttgtacctctct
gaaagtctcgactacgagacagaatccgtgtttcgttttcgagtcgtggccacatccagg
gaggcctcgctggtgaacatgacagcgacggccacagtgacggtgctggtgctggatgtc
aacgacaacgccccgctgttcagcagggaggtttactacttcaccgtgtcagagggggcg
tcgcctcgaggcctggtgggaacagtcaaagctgtggatgaggattctgggaagaacgct
cagctctcctacatcctgctctccgatgggaagttctttcgcattaacgctaaaacaggt
gagattataaactgggtggcgttggaccgggagcagcacagccagcacagcctgaaggtg
atggtgacggatcagggacaccctcgactcaacgccaccgccgccgttcacatcatggtc
acagacatcaatgacaacatgccacagttcacacacctgccagccagcaaggagctcagt
gttcagatatgggctggtctacctgcaggatccttggtgacaaacatgtttgccaaagat
ttagatgcaggagaaaatggaacggtcaccttctctctgctcgcagtgcatgccaccttc
tgcttcagagccttcccgcaagtgtacgcggttggtttagaggaggaggcaagtggacac
tttgagattgacagcgaaagtggagacgtccggacaacagaggttttcacgctgggagct
gaaacgtattacactctgagagtcagtgtaaaggacggaggagtcccagcgctggaggac
actgcagtcatacatgtacaggttcatggattggagggtctgtacggccgctctgaccac
caaatagtgagacgttttactgtgaaagaggacacggagccggggaccgtaatcggctct
gccagcgtctctgataaaggcaatctccactactccgtctccgagggcgacggcaacgtt
cacttcggcatcgacggctcctctggtgacatttacatcaaccagccgctggacttcgag
tctgcggcgcagtacttcctcctggttcgagctgaagatgggagactcgctcccggagtg
aacgtgtcagtgctggtcagcgtgatggtggaggacgtcaacgaccacacgccctggttc
cccgacaatgtggtgacattcggtctttgggaggacgccgcggtcggatcgctggtgatt
gcttttcatgccagggatgccgatggaacatttccgaacagcgccctccgctactccctg
acctttgaccctggctcctcatcgcgcttcccttttcagatcaacccgtacacagggagt
ctgactgtgaaagcgcctttagatcgggagaccacccccagctacgccttcaccgtgaca
gccaccgaccaggcgaagaggaaggaggagcggaagcaggcatcagtgacggcacaggtc
ttcctgctggacgtgaacgataaccggccggtgtttgtatcagcggacgcagtgcaggcg
atggaggatgtagaggtggggagcctgctgcatcactttgtggccatagatggagatcaa
ggggaaaatggggtcgtctcttacgtcatctttgctggaaacaagagaggattcttcacg
ctcgaggagaaaacaggcctcctgttcctctcggcccctctggactatgaaacccaccgt
ctccaccgtctgaccgtccgagcagtggaccacggccgcccctcgctctcctccacccag
actctgacggtggaggtcggggacgtgaacgaccagaaacccgtcttcagtcagagcgta
tacaacgccagcgtagctgagaacagagaccccggagagcctgtgaccagagtctctgcc
actgatgacgactcagaggagaatgccgtggtgtggtacagtctgctgcccggccccggc
tacgagctcttcagcatcaacccgtacaccggtctgatcaccaccacctcctacctggac
agagaggagcaccagcaattcaccctcagagtccaggctcgtgacagcagcacgcggccc
ctgtcaggtacggccacagtgctgtgctctgtgctggacgacaatgacaaccctccagag
ttcatgcagtcgtccttccagatcagcctgcctgagaacctgtcccccggggtcgtccac
accgctcaggcctccgatccagaccacggggaaaacggaaccatacactactccatatta
ggtgaggactacagaggtcgcttcaccatcaacagccacacaggcgccgtcagcaccacg
cagctcctcgaccgtgaggaagtgcagaattacactctcaccatccaggctcgcgattat
ggccccaacccgctcagctcctccaccgaactccagctgctgctgctggaccagaacgac
aacatcccctcctttaatcgtaagagctaccacgcctccatcagcgagggccttcctgga
ggaacccaggtcctgcaggtgagcgccttcgatcctgacgaggggtccaacggggatgtg
acatactccctgatggatgacagcagccagggggccttctctgtagaccctctcaccggg
gtgatccgcaccaccagggtattggacagagagagcagggcttcatacaccatcagagct
ctggctaccgacagctgcactctggggccgctgagctcgatggctacggtgagcatacag
gtggaggacgtgaacgacaacgtgcccgtctgcgatgagaatccgattaacgcctgggtt
tctatgaggacgctaccaaacgagattgtaaccactgtgacggcaacagacggcgaccag
ggggacaacgggaccatccggttcacgctgtcggacgaggagaacctgttcgacatcggc
agcgagtcaggagagatctcactgaggagacgagtgagggcaggattctctgggaggaag
ctgcaggttgtggtttcagaccgaggacgacctcctctaacctccacctgcctgttcttc
atccacctgaagggagagcacgaaggactgcagttcacaaacaaagtgtacaacgctaca
gtcaaggagaacagtagagctggcacgtggatcgcaaaggtggaggccagtgacccaaca
aacagcagacaaaggatcacatacaccatatttagcggcaacgagaatctcatgttctcc
atcagccgtcaaacgggtgagatccgtgtgcagaaagataactctctggacttcgaggcg
agccctcagatccaactggtggttctggctgataacgggctgcagacggctcactgcaga
gtctccatcagcctgctggacgtgaacgacaacgctccggtgtttgagcacggcagctac
agaacagctgtgtgggagggccaagtgcacaacacctacgtcatgcaggtgtttgcgtct
gatgctgacagcgggatgaacgggcagattgagtactccatcgtgtccgggaacactaat
ggagcgttcgtcttggactctgttcgagggattcttgctactaatgtcttactggaccgc
gagatcaccccgtcatacaagtacgccaaccccacgctggttctgcaggccgcagacagg
gggaacccttcactcagcagcaccaccaccatcagggtccaagtggtggatgtcaatgac
aacagccctgccatcccccctatggagcctgtgctcatagcagagaatctaccagcaggt
tacatggtcactcaggtgactgcgaacgacgtggacctgagctccaccatcacctacagc
ttttcagacaacagcagcacgaatgctccctttgctattgaccgatacactggtgtggtc
accctgactcgagctctggactatgaggaggagacagagtacgcgctgacagtctgggcg
tctgactacctccaccagaccactggagaggtcaaagttcaagtgcttgacgtcaatgac
aacgctccagtcttcacaaaggtctcctaccaggtggagttgtcggagttggtttcagca
gacacattggttttgtcagtgtctgctacagacagagactctggactcaatggcaagatc
acctacagactgctttcatctcctttacaaggcttttacatccagccagagaatgggtct
gttttcaccaataaacccttgaaggccatcacaaacaacaacctgatccatctcctggtt
gaggccaaagacgaaggtgatcccgtgcagtctgctgtaacctccatagatgtgcagatt
acggacaccaacgaccatgaacctttgttccatcaagacatctacacgctaaccgtccca
gaggacacgcctacagacacaacgctactgaccctgtctgcagaggaccaagactggagc
cctgaaaatacccatttggactatgccattatcaggggaaacgaggagaagcgattctgt
ctggaagttaaaatggtccaggttgatagtcagatgagaaatgtaggaaaagtcgttttg
tgcaaccctttggaccgcgagattacggaaagctatgcgctaactgtgagtgtatctgat
cgaggaacgcctccactgaacagctctgctgtcgtcatggtgactgtgaccgactgcaac
gacaatgcccccgtcttttccagcacagaataccatacacaggtgagtgaaaacagccat
gtaggtacaaggctggtccaggtcagcgctcaggatcctgacctgggaaccaatggcctt
ctgcggtatgacatcatctcaggcaacagcaaaggtcatctgaagctccaccctcagtct
ggccttctggtggtcaatcactccctggactatgaggaagactcaaaatacactctcacc
gttagagcatctgatggtggtgagtcacctgaagaacggaaagtggctttcacagtcgtc
ttcatcacagtgttggatgaaaatgacaacactccatacttcatgttcccagctgtttac
tgtactgtgctggagaaccttccagcatttacccacacctgttctgtccatgctgtggac
aatgacttgggtccatatgggcaactcacctactctattttgtcctcctgcttcatggac
tatggcagcggtagccctgagaagaaggaggcctttgctatcgattccctaactggggac
atccacaccaggcagaccttcgattacgaacgagagagtgagtactgtttcgtagtggag
gccagggacaaaggtgacaaagcagcaacagtgagagtgcaagtgagcatcaagggagtg
gatgaattcagtcctgtcttcacccaaaagcagtaccattttctcctgcctgaaaatgcc
aagcctggagagacagtcgggtatgtgatggcgatggaccatgatggagggttagatggg
ctggtggagtactcccttgtgaagtcatcaccgtttttctcaattaacaaaacaattggt
gccatctttgtgtctggtcctgtgtatcgcagaagaggcagccgtgccgatgaggacgtg
gtgaagctggttgtatctgcaggtagtcccagattggcttccaggactacgaactgccta
gtttttgtcaatatctccagctcagcggaggcactcaccggggtgcctcttgatgtgcac
atgctcagtttgagtgtctcacttatcatgttcctcctggtcctcctcttgtttgtgtgc
ttggttctaaggtacaagctaaaggaggcggcaatcaagaaagccattgctgcaaactta
aatcacggctcaggctcattctgtagatcaagtagcggaacgctaagtcccatctctctg
caggagattcaacgacgtggcatcccagtgaccacgcgagacatatcaaacccatacttt
cagtcagactcaagcggccgtggatcagcagaaggtgagaccgctgaggaccaggagatt
aagtggattaatgattacccctgccgtaaaagagacgagtcttccgaagacaaccagatc
atggagatccctgactctgctttagatgcggacactatatcctgccactctattgatgta
gggccagagcacattttatccatcaataaatgtttagtctcagggatggccagcactgaa
agccttcaccacttcaaagaggaaggaggaggtgagggactacttccagcaatacttcgg
gtgagggatttggaggagtgcatgaggacaaatgggtatgctcccctctcagaggcccat
gcctctgcagattctctctcctcactactgtgtctagaggagcagctgctaggaagctac
ggctgtgactatgttttagactgggagccacgcttccagactctggcctcagtcttcaac
gatatcgggatgctccctgatgaggagctccaaggcggcagggaggacttagcagcagag
gcaagctgtctcatgtatccaccacctctcataacgggtgtggcccagcctggcattaga
actgtacctccacgaaagccagtgcgtatgccaagcctgagcaggaggcgatcttgccgc
aaatatgcgtactcccccttagctaggaacacaggtcttaccccttcagtcatgacacct
acattctccccatccctgacttctcttaccgtaaggacccccagtgcctcaccagttgtg
tccgagacaggggtggcgggtatcagacttgactcagggcccctcactgcaagcctgtta
gaggcagaaatccaggtgtag
DBGET
integrated database retrieval system
