Semicossyphus pulcher (California sheephead): 138595094
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Entry
138595094 CDS
T10596
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138595094 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138595094 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138595094 (pcdh7a)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138595094 (pcdh7a)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Protocadherins
138595094 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
138595094
NCBI-ProteinID:
XP_069522514
LinkDB
All DBs
Position
Unknown
AA seq
1372 aa
AA seq
DB search
MQRLGAVHSSAAQALSLVVLLLQLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLTA
GTGSGDVTFALESGSEFFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGAAGSSSTRRAAGGNPITRVDGLGDRRGRSGDSGGGARSTVFELQVADIPDG
EKQPQLIVKGTLDRELKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYE
AEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRID
REEVAQLRFTVTARDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRIPVRDGAALVPE
NVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKKY
FLHTSALLDYEVTKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHFA
ENNSPGERVVTVVATDADSGKNAEIAYSLDSAANGPFYIDADNGDIRATGVLDREQRERY
ELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTD
ADEGENAELSLFVEMDGADDKKTGEKLEGEDGQKEREEVFSIENNTGTIFSSASFDREKL
STYTFRVRAVDGGEPRKTATATVSLFVTDENDNAPSITSPANESYTLLPPASSARTIVRT
VTALDSDTGPNADLHYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVVRVNDSG
IPSLCATALVHVFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIG
VLAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQVGRGRGSDRGR
KPRRDKRNGSGGGVVAGGGKSDRSLYSGIVTVNGLRRHANDDDEEDLSSASERLAARYCV
VDGDPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSNT
FVGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYNKQGTLRRVTFSVVS
QPQDGGCYDSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQL
PDVALTGKCTRECDEFGHSDTCWMPVRRSPRQRHGSDPPRLSTFAPGDDNNNLRGNDHES
DSESAGSAGSSEPGVVVSGEAQRLPLANGDPLGTLGRGDRNRNMGDHNRNLLNRKMTSAS
YDTFSSAGFGRRQPEEDGGEGQNPPEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggtgcagtgcactcctccgcggcgcaggctctcagcctcgtggtctta
ctgctgcagctgctgactcagctaccgggtgccgactcagctctccggtaccgggtggcg
gaggagggcccacctgacgtcaagattggcaacgtggccgccgacctgggcctcacggca
ggtacaggaagcggggatgtcacctttgccctggagagtggctcagagttctttaagatt
gacaatgtgacaggtgagctgaccacagggccaaggcgcattgacagagagaagctccca
cagtgtcagatgatatttgatgaaaacgagtgcttcttggactttgaggtgtcagtgata
gggccactgcagagctgggttgacttattcgaaggccgtgtggtcataacagacatcaac
gacaacacaccttccttcccctcacctgtgctccagctttctgtcgaggagaatcgccca
ataggaaccctatacctgctgccaacagctacagacagggatttcgggcgaaatggcatc
gaccgctacgagctgatccaagatggtgcagctgggtcaagttcaacgagacgcgcagca
ggaggaaaccccattactagagtggatggcctaggggaccggaggggtagaagtggagat
agcggaggaggagccaggagcaccgtgtttgaactacaggtcgcagatataccagatggt
gagaagcagccgcagctcatcgtgaaaggcacattggatcgtgagctgaaggactcatac
gagctcgtcctcagagttcgagatggagggaaccctccacgttcctcccaagccctgctt
cgtgtttccatcactgatgtgaatgacaacagcccacagttcgagaggtccacatatgag
gcagaaatggcagaaaacgctcctccaggtacacctgtcctccaggttagagcttcagac
cgtgatattggagtcaatgggcaggtggagtatgtctttggagctgccactgaatccgtc
aggcgacttctgcggctagacgaggcaactggatggctgagcgttcttcacaggatcgac
agagaggaagtggctcaactgaggttcacagtaacagccagagaccgaggccagccaccc
cgcaccgaccgcaccactgtggttttggctgtccgcgatgaaaatgacaatgtcccagtc
gtagagatccgaaagattggacggatccctgttcgagacggagcagcattggtacctgag
aatgttctggtggatacgccagtagctctggttcaggtgtcagaccgagaccagggagag
aacggggctgtgacgtgtacagttgtaggagacgtcccattcacactgaagccagctggt
gaaacagctctccctcccctaccggcagatgaagcctttgacaggaataagaaaaaatac
ttcttgcatacctctgccttgctggactacgaggttaccaaagagtacagtgtcaccatt
gtggcagtagattccggcagccccagtctgtccagtaacagctcactgatggtgcgagtg
gtggacatcaatgatcatgccccaacctttgcccaaagtgttgtcgaggtccactttgcg
gagaacaactcacctggtgaaagggtagtcactgtggtggccacagacgctgacagtggc
aagaatgctgagattgcatactccctggactctgctgctaatggtccattttacatagat
gcagataatggagatatccgggccactggggttctggaccgtgagcagcgagagaggtat
gagctccgggttattgccaaggacaagggtaccccttctctgcaaggctctgctactgtt
gtggttcaagtgaccgaccgcaatgacaatgccccaaagtttgttcaggaaatctttacc
ttctacgtgaaagagaacttgcttgccaacagcccagttggcatggtcactgtgactgac
gctgacgaaggagagaatgcagagcttagcctgttcgtagagatggatggagctgatgac
aagaaaactggagagaagttggaaggagaggatggccagaaagaaagagaagaggtgttt
tccattgagaacaacacgggaactatcttctcttccgcatcgttcgaccgcgaaaagctt
tccacctacactttccgtgtccgggcagtcgatggaggggagccccgcaaaactgccacc
gccaccgtctcgctcttcgtgacggatgaaaatgacaacgccccctcaatcacctctcct
gccaacgagtcctacaccctccttccacctgccagcagtgcacgtaccattgtcaggact
gtaacagccttggactcagacactgggccaaatgctgaccttcactatgccctggttggg
ggaaatcccttcaggctgtttgagattggccacaccaatggagtgatcaccctggcagaa
cctttggagcggcgccacagaggtctgcatcgcctggtggtccgggtcaatgatagcggg
atcccctctctctgtgccactgctctggttcacgtgttcatcaacgagagcttggccaac
gccaccttggtggatgcacaggtggcccgcagtctgatggctccactctcgctggacatc
gcaggggacccagacagcgagcgtgcattagggaagcagcgcctcagcgtagctattggt
gtcctggcgggagccgcggcggtcatcctggttatcctcctcgtggtcacagctcggcag
tgcggcgctcagggcaagaatggctatgaggccggtaagaaggagccggaggaagacttc
ttcagtcctccgggagctcaaccacaggtcggccgcgggaggggatcagaccgtggacgc
aaacctcgacgggacaaacgcaacggaagtggtggtggtgtggttgcgggaggagggaag
tcggacagatccctctacagcggtatcgtcacagttaacgggcttcgtcgccacgccaac
gacgatgatgaggaggatttaagcagtgctagtgagcgcctggccgcccgctactgtgtc
gtagacggcgaccccggcagcccacggatgggtggtgggaggagacaccagtcgagccca
gatctggccaggcactacaaatctagctcgcctctccctgcagtgaatctacagccacac
tcccccccagctgaggggaagaagcaccaggcggtccaggacctgcctccctccaacacc
tttgtgggcagtgggggttgtgtgggaagtgccggctccagcagcagcagtagtgggggc
agtggaaatgctgacgccatgtccctgggttctgaccagtgctcagagtacggctgccag
actgggaacaagtacaacaaacaggggacccttcgccgggtgaccttctctgtagtcagc
cagccccaggacggcggttgttatgacagcggcctggaggactcggagacgccgagcagc
aagagctcatcggggccgcggctgggagccctgccgctgcccgaggagggctacgagcgg
accaccccggagggcagtgtgggggaggaggagcatgtggagaatgatgccaggcagctg
ccagatgtagctctgacaggaaagtgcaccagggagtgtgacgaattcggccactctgac
acctgttggatgcccgttcggcgctcaccacgccagcgccacggcagcgaccccccacgg
ctctccaccttcgcccccggagacgacaacaacaatctcagaggtaacgaccacgagagt
gacagcgagagcgccggcagcgcagggagctctgaacccggggtggtcgtcagcggagaa
gctcagagattacccttagccaacggggatcctctcggcaccctgggcaggggagaccgc
aacaggaacatgggcgatcacaaccgtaacctcctgaaccgcaagatgacttcggcttcc
tacgacacgtttagcagcgcgggctttgggaggcgccagccggaggaggacggaggagaa
ggccagaacccgcctgaggtcataccactgacgcggacaggaggggactacaagaccacg
tcctgcctcacgttatcacgccgcgaggtgtacctgtga
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