Semicossyphus pulcher (California sheephead): 138595096
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Entry
138595096 CDS
T10596
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul02010
ABC transporters
spul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138595096
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138595096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spul02000
]
138595096
Transporters [BR:
spul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138595096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
138595096
NCBI-ProteinID:
XP_069522518
LinkDB
All DBs
Position
Unknown
AA seq
2270 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFVDAKKILLYSQNDK
SYEGYKGLLRALRKLQKNTARFKLKDFLQDNETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADANVSRLTQDIICKSSSDWLDKAQSHFLSNLDF
LKPIRRDVRADPKVVQEVSAATDNLLENLGALAVELASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSDPLSAYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMRPKVWSFMENSEEMDLVRTLLQNNASAAFLNAQLSGTDWQVSDVSKFLSKISEDQR
PAGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAGI
VFPDIARNNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEHGIIRAITGSKERIGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTMFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGG
KILVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GTMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENLNLSTPLSKKGNADAVCIEEEPGH
IDPGVYIENLVKVYSHGNKLAVDGLSLRFYNGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDVGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYCKKAEKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVS
EARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDSVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGT
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALEPGMYGEQFTFISNDLPEDPHMNKLLGALTDKPGFGTRCMSGEHMPDTCTAV
EDEWSIPEVSESVKNMFDRGNWSMENPSPLCECSCGGRKRMLPECPAGAGGLPPPQMKIT
AEDTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQLLSHTDDVD
DAIAQLRRRFRLERGTAADRFFHSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNG
ILRANLKGSKDPAKFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVVFFCITVLIQYRFCIKARSSTSHLKPIGEEDEDVARERQRILSGAGQSDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTSGEAYL
AGKSVNTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RPVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSTNKEALSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDVHLNKRDAVVVDIPQLNSFLMDNKTRESCV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagctgggtttactgctttggaagaacttcacctacagacggaga
cagactatccagctgctgattgagatcatctggcccctttttatcttcttcatcctgatc
tcggtccgaattcattatccaccctacgagcaacatgaatgccatttccccaacaaggcc
atgccctcggcgggtactcttccctgggtacaaggcatcatctgtaacgccaacaacccc
tgtttccggaaccccacacctggcgagagtccaggggtggtgggaaacttcaatgattct
ataatctcccgtctgttcgttgatgccaaaaagatcctgctctactctcagaatgataaa
agctacgagggctacaaaggactgctgagggccctcaggaagctgcagaagaacacagct
cgtttcaagctgaaggacttcctgcaagacaatgagaccctttcccacttcctgcaccac
aacgcctctcttccccatcacgcgctgaagcagattgtggaggctgacgtcaatctggag
aaggtcctgactaaaggattcggcttccatctcagagacctctgcaacaccaccccgctg
gaggagttcgtccacatagccgacgccaacgtgtcccgcctgactcaagacattatctgc
aagtcctccagtgattggctggacaaagcacagagccacttcctgtccaacttggacttc
ctcaaaccaattcgcagggatgtcagggccgaccccaaagtcgtccaggaagtctcagct
gctaccgacaatcttctggagaatctgggagcgctggccgtggagcttgccagtatgaaa
agttggaaggatatgcgtaaggagatcctgtatctgacggcaaacgccaccggctctccg
aaccagatgtaccaggctgtgtcacgtatcgtctgtggacacccggaggggggcggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctgtttggaaaccat
ggcaatgacagcgacagtgatcctctctctgcctacgacaactcttccactccttattgt
aacaacatgatgaggagcctggagtccagccctatttcccggatgatctggcgagccctg
aagcctctgctcatggggaagatcctgtacaccccagacactccagcgacacagagaatc
atccacgaggttaataagacgttccaggagctcggtgtgctgagggacctcggagggatg
tgggaggagatgaggcccaaagtctggagcttcatggagaacagcgaggaaatggacttg
gtcaggactctgctccagaataacgccagcgctgccttcttgaacgcccagctcagtggg
acagattggcaggtgtcagatgtgtccaaattcctgtccaagatctcagaggaccaaaga
ccagccggatctgcttacacgtggagagaagtcttcaacgaaactgaccaggccatacag
accatctcacgcttcatggagtgtgtgaacctggataagctggagccagtagccaacgag
gagcgactcgtcaacaagtccatgggcctcctggacaaccagaagttctgggctggcatc
gtgtttcccgacatcgcccgtaacaacagcactgacctgcctcccaacgtcaactataag
atccgcatggacatcgacaatgtggagaggaccaacaagattaaagacggctattgggac
cccggtcccagggcagacccctttgaggacctgcgttacatctggggcggattttcctac
ctgcaggacgtcatcgaacacggtatcatcagagccatcacaggcagtaaggagaggata
ggcatctacattcagcagatgccctacccctgctatgtggatgacatcttcctgcgggtg
atgagtcgatcgatgcctctcttcatgacgttagcttggatgtactctgtagccatcatc
atcaaaggcgtggtgtacgagaaggaggcgcggctcaaggagaccatgaggatcatggga
ctgaacaacggcaccctgtggctcagctggttcatcagcagtttaatccccctcctgatc
agcgctggtttgctggtgatgttactgaagatgggaaacctgctaccttacagtgacccg
ggagtggtgtttcttttcctggggtccttcggggttgttaccatcatgcagtgtttcctc
atcagcaccatgttctctcgcgcaaacctggccgctgcctgtgggggcatcatatacttc
accctctacctgccgtacgtgctgtgtgtcgcttggcaagactacgtgggcttcggaggg
aaaattctcgtgagcctcctgtctcctgtggcttttggtttcggctgcgagtactttgcc
ctgtttgaggagcagggggttgggatccagtggtccaacctgctggccagccctctggag
gaagacagctacaacctgaccacctccatctgcctgatgctgtttgacgccgtgctctac
ggaacaatgacctggtacatcgaagccgtgttccctggtcagtatgggatccccaggcct
tggtacttccctttcactcgaacgtactggtgcggcgagaaagagaacctgaacctctcc
acccctctgtcaaagaagggcaacgctgatgctgtgtgtatcgaggaggagccgggccac
atcgacccaggcgtttacatcgagaatctggtgaaggtctacagccacggaaacaagctg
gctgtagacggactgtccctgaggttctacaacggacagatcacctccttcctcggccac
aatggagccggcaagaccacaaccatgtcaatcctgactgggttgtttccgcccacctct
ggtacggcctacatcctcggcaaggacatccgcactgagctcagcaccatccggcagaat
ctgggcgtctgccctcagcacaacgtacttttcagcatgctgacagtggaggaacacatc
tggttctacgcccgtctgaaggggctgccagaggagaaggtgaaggctgagatggaacaa
atcgtgaacgacgtcggactgcctcacaaacgaaagtcccgcaccagcacgctttccgga
gggatgcagaggaagctgtcagtggctctggcttttgttgggggctcaaaggttgtgatc
ctggatgaacctactgctggggtcgacccctatgcacgtaggggcatctgggaccttctg
cttaaatacagacaaggccgcaccatcatcctgtccactcatcacatggatgaggctgac
atcctgggtgaccgcatcgccatcatttcccacggcaaactgtgctgtgttggctcctcg
ctctttctgaagacccagctgggcaccggctactacctgaccctggtgaagagagactac
gacctgacgcttcagtcctgcagaaactctgccagcaccgtctcctactgcaagaaggca
gagaaggaggacagtgtatcagagagcagctcggatgcaggccttggcagcgaaccagag
agcgaaaccaccactattgatgtgtccctcatctccaacgtgatattcaagcatgtctcc
gaggctcgcctggtcgaggatctcggccatgaaatcacatatgtcttgccctaccagtca
gctaaggatggagcctttgtggagctcttccacgagctggatgaccgactcacagacctg
ggaatatctagttatggaatatctgataccaccctggaagagatcttcctgaaagtggcc
gaggacagtggagtggactctgttgagctttcagacggagttgtgccgaccaggacccgc
cgccatcacgcatttggagaccaccagagctgcctgaagcccttcactgaggacgacttt
gatttcaatgactcagaaggtgacccagaatcccgtgagaccgactggctcagtggaaca
gatggcaaaggttcgtaccaggtcaaaggctggagtctgaagagacagcagtttgttgct
ctcctctggaaacgattcctctacgctcggcgctccaggaaaggcttctttgctcagatc
gttcttccggctgtgtttgtgtgtatcgccctcgtgttcagtctgatcgttcctccattt
ggaaagtacccaagtctggctttggaacccggcatgtacggagagcagtttaccttcatc
agcaatgaccttcctgaggaccctcatatgaacaaactccttggagctctgacagataaa
ccaggatttgggacacgctgcatgagtggagagcacatgccggacacttgtacagcagtc
gaggatgaatggtcgatcccagaagtctctgaaagtgtgaagaacatgttcgacagagga
aactggtccatggagaacccgtcccccctctgtgagtgcagctgtggaggacgcaagagg
atgcttccagagtgtcccgctggtgccgggggacttccaccaccacagatgaagatcact
gctgaagacactcttcagaatctgactggcagaaacgtctcagactatctggttaaaacc
tacgcgcagatcatcggcaagagcctgaagaacaagatttgggtcaacgagttcagatac
ggcggattctcgctgggcgccaggagttctcagcttctttcccacacagatgatgtcgat
gatgcgatcgctcagctgaggagacgcttccgtctggagaggggaacagcagcggatcgt
ttcttccacagtctctccagctttatccaaggattggacaccaagaataacgtcaagatc
tggtttaacaacaagggctggcacagcatcggctccttcctcaatgtgatgaacaacggc
atcctgcgcgcgaatctgaaaggcagcaaagacccggcaaagtttggcatcaccgccttc
aatcacccgctcaacctcaccaaggagcagctgtcacaagtagcactgatgacgacatca
gtcgatgtgctggtttccatttgcgtgatcttcgccatgtccttcgtccccgccagtttt
gtggtcttcctcatccaggagagagtgaacaaggccaaacacatgcagttcatcagcgga
gtgcagcctttcctctactggctcgccaactttgtttgggatatgtgtaactacatcgtt
ccagccaccctggtcatcatcatctttgtgtgtttccaacaagacgcctacgtctcctcc
accaatctgccggtgctggctctgctgctgctgctctacggatggtcgatcacccctctg
atgtacccggcctcgttcttctttaagatccccagcacggcctacgtggttctgaccagc
gttaacatcctgattggaatcaacggcagcgtctccacatttgttctggagctgttcgga
agcaatgaaattggtggcatcaacgacatcctgaagaacgtgttcctcatcttccctcac
ttctgtctgggcagaggactcattgacatggtgaagaatcaggccatggccgacgctttg
gagagattcggagaaaaccggttccgctcccctctggcgtgggacatggtgggaaagaac
ctgtttgcaatggccatagagggcgtggtcttcttctgcatcaccgtcctcattcagtac
cgcttctgcatcaaggccaggtcgtccaccagtcatctgaagcctatcggagaagaggac
gaggacgtggccagagagcggcagaggatcctgagcggagcgggacagtcggacatcctg
gagctcaggcagctcacaaagatttacaagcggaaacagaagcctgcagtcgacaggctg
tgtgtcggcatcccacctggagagtgctttggtttgcttggagtgaacggtgcagggaaa
acaagcacttttaagatgctgacaggagactctttagtcaccagcggcgaggcctacctg
gctggcaaaagtgtgaacacagagatagacgaggtgcatcagaacatgggctactgccct
caatttgacgccatcaacgacctgctgaccggcagagagcacctcgagttttacgccatc
ctgagaggagtgcccgagaaggaagtgtgtgaggtggcagagtggggcatcaggaagctg
ggcctggtcaaatatgtggacaagtcagcgggcagctacagtggaggaaacatgaggaaa
ctatccaccgccatcgctctcataggaggacctcctgtcgtcttcctggatgagccaact
acaggcatggaccctaaagctcgccgtgctctgtggaacgcaatcctgagcatcatcaaa
gagggacgatcagtagtcctgacctctcacagcatggaggagtgtgaagcactctgcacc
agaatggccatcatggtcaacggcaggttccgctgtttgggcagtgtgcaacatctcaaa
aacaggtttggtgatggctacaccatcatcctgcgggtggcgggtccagacccagacctc
cggccggtgatggagttcatcgagcgggagcttccaggcagcacgctgaaagagaaacac
cgcaacatgctgcagtaccagctgccctcctccctcacctccctcgcccgcatcttctcc
ctgctctctacgaacaaggaggcgctcagcatagaggactactctgtctcccagacaact
ctagaccaagtgtttgtaaatttcgccaaggaccaaagtgatgaggaccatttgaaagac
gtccatctgaacaagagggacgctgtggtagtggacattcctcagctgaactctttccta
atggacaacaagaccagggagagctgcgtctga
DBGET
integrated database retrieval system
