Semicossyphus pulcher (California sheephead): 138595207
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Entry
138595207 CDS
T10596
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138595207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spul03009
]
138595207
Ribosome biogenesis [BR:
spul03009
]
Eukaryotic type
Pre-60S particles
RNases
138595207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
138595207
NCBI-ProteinID:
XP_069522660
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MEPPSSSSSAATCNRQKRKNIDPTAQKKAKRLKTVQVGEESLDCGRSSPSPRISVLPDHL
QQPITQNELTELLHYAALGKTGGIKQPSWCRLLHQKRITAINVVIVEGMTQSHFYKHYLT
LRHLRTSYTTRITFTPSSSDLASGIFSCKLPETDGLTRSQRQHESSGLHKALRSHPVITK
FGTQRRGLTAYVLPLDEMIKRHYPVKGMPGFEEFLCTDSVDCVTDNCPLFGLDCEMCLTE
RGYELARVSLVDSDGNCVLDELVKPQSRILDYLTRFSGITAAMLRPITTTLRDIQAKLRK
LLPGDAVLVGHSLNNDLMALKLIHQHVIDTSLLYRREFGQRFKLKVLAETVLKRHIQTEE
KKGHNPIEDAVAALELAQYFIKKGPRQVVELHLEELWGYKIEEESADCAPAPAPSLRFAD
ILQTLGHSVTYLGKRSDVTLDLSSQQWHNSDKEVLASYRRQTKCPLLSVLQFSSISDHLK
RCFPNQDQQHHGECSNLRDMCVVFAGPFPAGFTEREVKRLFSCCGPVRKIKMLSTAIRVH
AEVAFELLEGAALALKALNGLNVQGQSIKVQRPINESMLDLDLTLDALTGDSLNTNHIYA
VKLKPSTAECILVPAKVNGHTLDAKSSVESSNVLPQAKVNGKTLQARNTKSKLCEETVRE
IFTHFGAVESVLLPAKPGKHARHANIRFESSEGKHAALSASEDLLKRNYLVCTSLTPPHL
HAWAAMDTPTSSVDPDEEAAEEKRTHVQNSSQDQEMDLMMRKLDRRLGKLFRSLSNGTLS
VVVLLGCNSARGHLPGLCLIEVKGAS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccgtcatcatcatcatcagcagcgacatgcaacagacaaaaaagaaagaac
atcgaccccacagcacagaagaaggccaagagattaaaaactgtgcaggttggtgaggag
tcgctggattgtggacgctcttctccctcaccgaggatctctgtgctgcccgaccacctt
caacaacccattacacaaaatgagctgacggagctgctgcattatgccgctctggggaaa
acaggcggtattaaacagcccagttggtgccgactcctgcatcagaagaggattacagcg
ataaatgtggttattgtggagggcatgacccagagtcacttttacaaacactacctcacc
ctgcgacacctccggaccagctacaccaccaggatcacctttactccatcatcgtcagac
ctggcctcaggaatcttcagctgtaaacttcctgaaacagatggtttaacccgttctcag
agacaacacgaaagcagtggattgcataaagcactgaggagtcacccagtaatcactaag
tttggcacacagaggagaggactgacggcgtatgttctccccctggacgagatgatcaag
agacattaccccgtcaaagggatgccgggctttgaggagtttctgtgcacagacagtgtc
gactgtgtgactgacaactgccctctctttggacttgactgtgaaatgtgtctaacagaa
cgaggatatgagctggctcgtgtctctctggtggacagtgatgggaactgtgtgctggat
gagctggtgaaaccccagagccgaatcctcgactacctcaccaggttctctggtataacg
gcggcaatgttgcgaccgatcacaaccaccctgcgggacattcaggcaaaactcaggaag
ttgcttccgggggacgcagttcttgtgggccattcactgaacaacgacctgatggctctg
aaactgatccaccagcacgtcatcgacacctcgctgctgtacaggagagagtttggacag
aggtttaagctcaaggtcctggccgagacggtgctgaagaggcacatacagactgaagag
aagaagggtcataatcccattgaggacgccgtggcggccctggagctggcccagtacttt
attaaaaaaggacctcgccaggttgtagaacttcatctggaggagctgtggggatataag
atagaggaggagtctgctgactgtgctcctgcacctgcaccaagtctcaggtttgccgac
atacttcagacactcggccactcagtaacctatttaggaaagcgctctgatgtcaccctg
gatctgtccagtcagcagtggcacaactctgacaaagaggtgctggcctcttacaggaga
cagaccaagtgtccgctcctctcagtgctccagttctcttccatctcagaccatctgaag
aggtgcttccctaaccaggatcaacagcaccacggggagtgttcaaaccttcgagatatg
tgcgtggtgtttgctggtccgtttcctgcgggcttcactgagagggaagtgaagcggctg
ttttcttgctgcggacccgttcggaagatcaaaatgttgagcacagctatcagggttcat
gcagaggtagcgttcgagctcctggagggagctgccctcgcattgaaagctttgaacgga
cttaacgttcagggacaatccatcaaggttcaaaggcccattaatgagtcgatgctggac
ttggatctgactcttgatgctctgacgggcgacagtctcaacacgaatcacatctacgct
gttaaattaaagcccagtacggctgagtgcatactcgttcctgcaaaagtcaatggacac
acgttagatgctaaaagttcagttgagtcgtcaaacgttttgcctcaagctaaagtaaac
ggtaaaacattacaggccagaaacacaaagtctaaactgtgtgaggagacagtcagagag
atattcactcactttggtgcggtggagagcgttctcctgccggccaaacctgggaaacat
gcgagacatgcaaacataaggtttgagagttcagagggtaaacatgcagccctcagcgcc
tctgaggatctactgaagaggaactacctcgtctgtacgtctctaaccccgccccattta
catgcatgggctgccatggacacgccaacctcctcagtggaccctgacgaggaggcagca
gaagagaagaggacccacgtgcaaaacagttctcaggaccaggagatggatctcatgatg
aggaagttggaccgccgcctggggaagctcttcaggtctctctcaaacggcaccttgtct
gtggttgttctgctcggatgcaacagtgctcgtggacatcttcctggtttgtgccttatc
gaggtcaagggagcgtcttga
DBGET
integrated database retrieval system
