Semicossyphus pulcher (California sheephead): 138595646
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Entry
138595646 CDS
T10596
Name
(RefSeq) nephrocystin-3-like isoform X1
KO
K19360
nephrocystin-3
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Cilium and associated proteins [BR:
spul03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
138595646
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
138595646
NCBI-ProteinID:
XP_069523082
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Position
Unknown
AA seq
2034 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRAPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDPNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLIFTQETKAEFDIFIRKHSP
ALRRMCEGLGHFYLNVCFPEESATSYAAERKQEIERSSVCVLLLKSTVTSSVVEDCEEAF
VKNPDGHPLVLYLRTEEDHSLTGPTRQLLERVNAADKAAKVKVVDHSGSAEEGAALIYAQ
LEKVIKQELLGLEGADVDSKDSGIEEGREEDSGDVLWDLHDEQEQIESYQQACGSTTSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQQQKQSPNTLFLYHFVGRP
LSTSAEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSVVNAE
CQSMDLKFTKDQEKKLERHCRSASTCNALYVTLLARMIVSTSCWSLEKSLEQCLLCQDTM
SLYRLALKMTLSSLNTDRERHVMREILCLVCASHNGVSESEVQDLFPELELPVLSSLLHR
LNRLCVVTLRCGLIRFQHLQAWEAVRSEFLGGGSSSAAYREKLIHHFSQQLSQDRVTWRV
ADELPWLLQQQEDRSKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKHYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSVA
RSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYEQ
AEKLRKMSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADCAKTLNELGVLYYL
QNNLDAAKIFLSRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDIR
KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVNL
AVIYCQLKKHGDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELYK
RAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPHAPSAGQSNPTFLIQTPSNSYVL
RKKPPGELLPGAHKVDREYRVQKALFSAGFPVPQPLLHCTDAEVIGTDFYLMQHMKGRIF
RDMRLPGVRAAERTALYVAAVEVLAKLHSLDLASLNLDGYGKGPGYCKRQVSTWTKQYTA
AAHRDIPAMNELSDWLRKNLPASDNEVTLVHGDFRLDNLVFHPTEARVIAVLDWELSTTG
QPLADLAYFLMPKYWPKSLNMLSTMGSLKGIEGIPSVNDLISIYCRCRGIPTALPELNFY
LALSVFKMAGIAQGIYARHLLGNASAPNAAQFAHCVEPLAKFALQLAQRCVFLARSITGP
TEEALFLQTAKGQAVLHQVKDFMRQYVLPAQQQVAEYYSKHAQSLQRWHTPQVIEDLKVK
AREAGLWNLFLPAVSGLSQLDYAYIAEETGRCLFAPEVFNCQAPDTGNMEVLHMFGSEEQ
KKTWLEPLLRGESRSCFCMTEPDVASSDATNMECTLHRDGDHYVINGKKWWSSGAGNPQC
KVAIVMCRSGSQDVGSRHGQHSMILVPVHTPGVKLVRPLTVFGQDDAIHGGHFEVHFENV
RVPLANIILGEGRGFEIAQGRLGPGRLHHCMRAVGAAELALELLCQRAASRSTFGKKLYQ
HEVVAHWIAECRLMIEQTRLLTLQAAHALDTVGSRAARKQIAMIKVAAARMACKVVDIAI
QVYGGAGVSGDVPLAQLYSYVRTLRIADGPDEVHLSSIAGLELRDQLKKAQAKL
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccaggagaggtaatcgaagatggatatgggggt
gaaggtggggaagcctgcgagatcccagtggaggtgaagcccaaagcccgactcctgcga
agctccttccgcagagcacctcgggtgattggggccagttttaaatccaccggttctgtg
gatctggagtatgctgctgagtacgaaagactgcgtaaagagtatgaaatcttccgtgtc
agcaagaataacgagatctcatccatgcagaagaaggaggccaagctggatgaggagaac
aagaggctgcgagctgagctacaggctctgcagaagacctaccagaagatccttagagaa
aaagagagtgctcttgaggcaaagtaccaagctatggagagggctgccacctttgaacac
gaccgggacaaagtaaaacgacagtttaagattttccgagagacaaaagaaaaggaaatt
caggatctcctgcgggccaagagggacttggaggccaagttgcagcagttgcaggctcag
ggtatccaggtctatgacccaaatgattctgactcagatgacaaccaaaccacagttact
gctgcagggacacagtgtgagtactggtctggtggtgttctggggagtgagccctctatg
ggtagcatgatgcagttgcagcagacctttcggggaccagagtttgcccacagtttgatc
gatgtggagggaccctttgcaaacgtgagcagagatgactgggatgccgcggtggccagt
ctgcttcaggtgtcccctcatgtaccccaggccttatggagtaacacagtccgctgctac
ctaatctttacccaggagaccaaagctgagtttgatatatttattaggaaacactctcct
gcgttacgaagaatgtgtgagggtctgggccacttctacctgaatgtctgcttcccagag
gagagtgccacctcgtacgctgcggagcgcaagcaggagatcgaaaggagctctgtgtgt
gtgcttcttctcaagtcaactgtcacaagctctgttgtggaggactgtgaggaggctttt
gtgaagaatccagatggacatccactggtgctctacctcaggactgaagaggatcacagt
ttgaccggacccacgaggcaactgctggaaagggtgaatgctgcagacaaggcagctaaa
gtcaaggtagtggatcatagcggctctgcagaggagggagctgccctgatttacgctcag
ctggagaaagtcatcaaacaggagttgctgggtcttgaaggagctgacgttgactctaag
gattctgggatagaggagggacgtgaggaagactcaggagatgtgctgtgggacctgcat
gatgagcaggagcagatagagtcttaccagcaggcctgtggcagcaccacgtcacagtta
ggcttccagaagtatatagatcgtttgaatgacatgatagctgctcctcctccaacccca
cctctgctggtgtcgggcggtccaggctcagggaagtctctcctgctctccaaatggatc
gagcagcagcagaagcagtcgcccaacaccttgttcctgtatcattttgtgggccgccca
ctttcaacaagcgcagagcccgttctcattatcaaacgcctcacggttaaactgctgcag
cacttctggtcaatttctggcttgtccatggagcccagtaagatcctggaggagtttccc
cgctggcttgaaagactctcagcacgccatcaaggaaacatcatcatcattattgactct
attgaccaaatacaacaagcagaaagacacatgaagtggctgatcgaccctcttcctgtc
aatgtcagagtggtggtgtcggtcaatgtggagacgtgtcctcaagcttggaggttgtgg
cccacactccacttagacccactgagccccagagaggtcaggagcgttgttaatgccgag
tgccagagcatggatctgaaatttacaaaggaccaggagaagaagctagaaaggcactgt
cgctccgcatcgacctgcaacgccttgtatgtcacgcttctcgcaaggatgatcgtaagt
acgtcatgttggtcgttggagaagagcctggagcagtgtctgctgtgtcaggacaccatg
tcgctctaccgcctggccctcaaaatgacgctgagctccctcaacacagacagggagcga
catgttatgagagagatactgtgccttgtgtgtgccagccataatggagtgagtgaatca
gaggtgcaagaccttttcccagagctcgagctgcctgtcctgtcctctctgcttcaccgt
ctgaacagactctgcgttgtaaccctccgttgtgggctcatcaggtttcaacatctgcag
gcttgggaagctgtgaggtcggagttcctgggcggaggaagcagctcggctgcttacaga
gagaaactcatacatcatttcagccagcagctcagccaggaccgtgtgacttggcgggtc
gcagacgagctgccctggctgctccaacagcaggaggacagaagtaaactccagctcagc
ctcctgaacctgtttgtctcccagaacctctacaagaggggtcatttctctgagctgctc
gcctattggcaatatgtgggcaaagacaaaagctccatggccaccgagtactttgactcc
ctgaaacactacgagaagagctgtgagagcgaagacagcatgaccaagctggccaacctg
tatgagacgttaggacgtttcctcaaagacctgggcctcccgagtcaggccgtcgccccc
ttacagaggtcccttgagattagggagacagccttggacccggaccatcccagcgtggct
cgctccctgcaccagctggccggggtttatgttcagtggaagaagtatggtaacgctgag
cagctgtacaagcaggccctggagataagtgagaatgcgtacggcgctgagcacgcgagc
gtggcacgagagctggagtcgctcgccatgctgtatcagaaacaaaacaagtatgaacag
gcagagaaactcaggaagatgtctgtgaagatccgtcagaagactgcacgccagaaaggt
catatgtacggcttcactctgttgaggcgcagagccctgcagctggaggagctgaccctg
ggaaaagactccgcagactgtgccaagacgcttaatgagctgggcgtcctgtactacctc
caaaacaacctggatgcagccaaaatcttcctgagccgctctctggagatgcgtcagcgt
gtcctcggcccggatcacccagactgcgctcagtccctcaacaacctggctgcactgcac
acagagaggagggagtatgagacggctgaggacatgtacgaaagggcgctggacatccgt
aaaagggccttatccccggaccacccttctctggcatacacgctcaaacacctggccatg
ctgtataaacgccgaggaaagctggaaaaggctgtgccgctgtatgagctttctctggaa
atcagggaaaaaagctttgggcccaaacaccccagtgtggctacagcactcgtcaacctg
gctgtgatctactgccagctaaagaagcacggtgacgccttgcctctttatgaacgagcg
ctgaaagtgtatgaagatagtttgggccgctcgcatccacgagtgggagagaccctgaag
aacctagctgtgctcagctatgaagagggtgacttcgagaaggcagcagagctttacaaa
cgtgcaatggagataaaggaggcggagccatcgttggtgtgtgggaacgccccgtcacgc
cactcctccagcggggacaccttcagtctgaggggacctgctcccctcccgcacgccccg
agtgctggtcaatcgaacccgactttcctaatccaaacaccctcaaacagctatgtgctc
aggaagaagcccccaggtgagctgctgccaggtgcacacaaagtggacagggagtatcgg
gtgcagaaggccctgttctctgctggcttccctgttcctcagcctctcttgcactgcact
gatgctgaagtcattggaacagatttctacttgatgcagcacatgaaggggcgtatattc
agggatatgcgtctccctggagtgcgtgcagcagagagaacagctctgtatgtggctgct
gtggaagtgctggcaaagctgcactcactggacctggcatcgctgaaccttgacgggtat
ggaaaaggacctggctactgcaagagacaagtgtccacctggacgaagcagtacaccgcc
gcagcccacagagacattccagccatgaatgagctttctgactggttgaggaagaattta
ccagcgagtgataacgaggtcacgcttgtccacggagatttccgacttgacaatttggta
tttcatccaacagaggctcgtgtgatagcagtgttggactgggagctgtctaccaccggg
cagcctttggcagacctggcctacttcctcatgcctaaatactggcctaaaagcctcaac
atgctcagcacaatgggcagcttaaaaggaatagaaggtattccatctgtgaatgatttg
atctccatttactgccggtgtcggggaatcccaactgctttgccggagttgaatttctac
ctggccctgtctgtgtttaaaatggcgggcatcgcccaggggatctatgcacgccacctg
ctgggtaacgccagcgctcccaatgcagcccagttcgcccactgtgtggagcccttggct
aagtttgccctgcagcttgcccagaggtgtgtttttcttgccaggtccatcacaggtccg
acagaggaagctctgttcctccagacagctaaaggtcaggctgttctccatcaggtcaaa
gacttcatgagacagtacgtgcttcctgctcagcagcaagttgcagaatactactccaaa
cacgcccagtctctgcagaggtggcacacccctcaagtaatagaagatctaaaggtgaaa
gccagggaggcggggctgtggaacctgttcctgcctgcggtcagcggtctcagtcagctg
gactacgcctacattgcagaggaaaccggacgctgcctctttgcccctgaagtcttcaac
tgccaggctcctgacacaggcaacatggaggtgctgcacatgtttggcagcgaggagcag
aagaagacatggctggagcctctgctccgaggagagagccgctcctgcttctgtatgaca
gagcctgatgtggcctccagtgatgcaaccaacatggagtgcacgcttcacagggatgga
gaccactatgtcatcaacggcaagaagtggtggagcagtggtgcaggaaatccccagtgc
aaagtggccattgtgatgtgcaggagcggctcgcaggatgtcggcagcaggcacggccag
cacagtatgatcctcgtccccgtgcacacaccaggcgtaaagctcgtcaggccgctcact
gtgtttggacaggatgacgccatccatggtggccactttgaagtgcactttgaaaatgtg
cgtgtccctttggccaacattattctgggagagggcaggggattcgagatcgctcagggt
cgtctggggccgggccggctgcaccactgcatgagagctgtcggtgctgcagagttggcg
ctggagctgctctgccagcgggcggcctccaggagcacgtttggaaagaaactctaccaa
catgaagttgttgctcactggatagcagagtgtcgtctaatgatagaacagacccgtctg
ctgactctacaggctgctcatgctctggatacagtgggcagccgcgccgctcgcaaacag
attgctatgatcaaggtcgcagcagccaggatggcctgtaaggtggtggacattgctata
caggtatatggaggcgcaggtgtgtccggagacgtcccgcttgcacagttgtattcgtat
gtgaggactctgcgaatcgctgacgggccagatgaagtgcatctctcttcgattgctggt
ctagagctgagggatcaactgaagaaagcacaggccaaactgtga
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