Semicossyphus pulcher (California sheephead): 138595764
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Entry
138595764 CDS
T10596
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
spul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138595764 (lama1)
04518 Integrin signaling
138595764 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138595764 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138595764 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_N
Laminin_B
EGF_LMN_ATRN
Laminin_G_3
Laminin_I
ConA_2nd_BAM2
DUF745
PUMA_CC
DUF8567
Motif
Other DBs
NCBI-GeneID:
138595764
NCBI-ProteinID:
XP_069523277
LinkDB
All DBs
Position
Unknown
AA seq
3072 aa
AA seq
DB search
MKLLLLLLLMERAAAQQRGLFPAILNLASNAVISSNATCGDPEPEVYCKLVEHVPGRLIK
NPHCPKCDANSVLSKERHPITNAIDGTNRWWQSPSIKNGRQFHWITITLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGVTFDPWQFYAISDSECLTHYNVTPRLGPPTYKSDKEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADDLTSDLLNFTSARYIRLRLQRIRTLNADLMTLS
ARDPRDIDPIVTRRYYYSIKDVSVGGMCICYGHAQSCPLDPVTKKLQCVCEHNTCGESCN
ECCPGYHQQPWQPGTISEGNTCEKCNCHNKAVDCFYNQTVSELSLSLNSRGIRRGGGVCI
DCQQNTAGINCETCAAEYYRPAEVSPYSDAPCEECNCDLRGSESSVCSRDDSRPGVLAGQ
CVCKEGFTGRQCDRCAFGYRDFPRCVRCECNLSGSINSDPCSPCICKVNVMGAHCDLCKP
GFYNLQENNPLGCTDCFCFGVSNVCESSAWLTAQVYHADALLRPSQSPHILAVVQGNDLP
ILSNISLGHPHQQVLSWVAPESFLGNKLVSYGGFLNFSVVYNVPLDNEDHSLLAHCDIIV
EGNGRALHLSPPHLLSLSPLAEHFVAVTMAQRQFVDIQTGYHVTRDDLLSVLADVISLRV
RVHLNASAEGPIYLSFLSLDVADNGSISGDQAVSVETCECPWGYSGTSCETCLPGFFRVG
GVLFGGNCLPCECNDHATECDSSGVCVGCTHNTTGPHCDTCLPGFYGDATEGTADDCRQC
LCPLMSNSFSPTCVLEPSGQVSCDQCQVGYTGTSCERCASGFFGNPLVVGGACVHCECHG
NVDVREAGHCDTVTGECLRCLGNTAGRHCEVCQPGYYGDAVNRKDCRECSCDVSGALSSE
CDVTTGQCLCRENVTGRTCDRCQSGFFGLQSGQGCWGCGCSQSGSLSQSCDEKGRCQCAV
GVAGDKCDRCSRGYYGFHAKGCKACTCDHTGGNCDPESGECICPANTQGDTCDKCKAGHW
GHDPAAGCKPCSCNAGSSAPQCDLTNGQCRCREGFSGRSCDQCAPGYYGYPECSACGCDV
AGTDERFCNTTLRVCDCGHTGECVCKVGVSGRRCEECVSGWFALSADGCSQCFCSGLSRD
CEEKGGLYRVPITLARSPALLSLVSQSNLQAVESGVFLQGGVMLLDTRHLNSSRLAGPLY
WRLPPQFGGRQLLSYGGLLSYIITFYAEDGLGLSNQEPQVLMRGGTLKKLVIYTDMAAPS
NGIRTQHDIMMTEHRWKYFNSVWEEPVSRSDFLSIISDIEYMVIKASYGSRLQQSRISNI
TMETAVEAESLEGSEVGVGVARHIESCVCPPGYTGLSCQDCAAGYFRQPLSELSSQSLKS
QFVRPCVRCRCNNHSESCDMKTGDCQGCQHHTSGRSCEICAPGYYGNVSGSISDCSLCAC
PLQDNSFSPTCVSEGAFGDFRCDTCQEGFEGRYCERCSVGYYGNPSLPGGVCSRCTCSRW
GSLQPHCDALTGQCDCKDGVKGQSCDQCDERHILQGGFCVSCDDECSGVLLDDLEKVNNH
FLSVNLSSIAMAPYRQLVMLENQTRDLQVLFSQNTSVALHLSRAEDELNYLTSDLGPLLQ
QLTRLSNHLENVFMSTNNSLSQGALLLESISSLQDNIQALQRGAELLNQTTEEELDSANQ
TRLLAQVTSMLENIRTINLTDANVAANQELSLSESLVHSLQSHFLSNRVTVDDRLRPLSA
NLTGGIETLQFTHTQLSSAVKQNKETHSLLDNAHTLLQQYQSDRQNLSAACVFLGGVMED
SQLLLDDTISLTEELTNTTSQVEVFSSHLDQWRPLLRKQVDGLVVGLKRTDALENVYRAE
SHAHQLQSHSHSLHSSLSSVWNVSQNGSRLVQLDSDIRERVHFAQQVALIAHNSASLALN
MSIQSEQSLLEEGGAKLNMSSAVLEESQRINDTSEDLQLNVTLVTSRLGLVRESIHNSSS
LLRQPIKELLHLSNGSAVTLQQAQLQAAAAHSGLQGTLHRLHTLSQQLQDSSSVVENTNM
TVRETNQLVKDTHTAVNEAQRKLEEVGHRTERLMDRIKPLSMLGENLSRNLSDIRELIDQ
ARKQAASIKVAVQADRDCVRSYKPQIQSSNFNSLSLTLKTRSPNNLLFYLGSNSTADFLA
VEMHDGKVSLLWDLGSGSSRLTFTGLNINNNRWTRINATRFGAHAALSVHQLESEAALLP
AVTATSPGPARVLEVNENSVIHIGGRSLHTQTPALLRSSTFQGCVGEATLNERNVGLWNY
VSREGGCGGCFSSPQVEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLSPGGLLLYLSS
NNTRDFLSMELIEGRVRLTFDLGSGALILTSNRKYNTGVWYKITLQRSKRKGYLSIMAAD
QSSEKEVLEAESPGTASDLNRSDLDPIYIGGLPASRPIRRQVVSRSYVGCIKNVEIARSN
FDLLRDAYGVRKGCVLEAVRSVSLLAGGFVQIAPRSFGLEAELLFSFSSNNQSGVLLAAF
SDTQTDRQFFLSVHLVSGSLEVELGEVGVATRRVMVVKPDGGSFSDGTKHSVIIAINRKS
LSLQVDEEHKKSVSLLAGGFSRLSPASLFIGGIPSGAESRLPIRLQDVSRWFRGCIQHLV
VGGALVDLSEAVRYEGAELDSCLLEERVGGAVLPDDQDVEPTPDPSHLPLAPPTHLSALT
PGALMCVSEAEPTFLQSAAQFGLSKHSHMTFIIKPDTVKRNVSVRLSVRSRALNGLIFLL
SDAKQNDFIILRLRGGRLMMSANLGKGPASITSSVPINDGAWHTVSAELGRRSLVVSVDG
SRPDSVSVKGNQLDVEDRVYLGGLPHTHASRRINVSSSFPGCVHSVSLNRVMLDLSKPAS
QHDVTSCFTNDQTGNYFNGSGYAALMRDGYKVGSDLSVSLEFRTSQSEGVFLGISSLKVD
AIGLEMINGQLVFHVNNGAGRVSVRSIGHMLCDGRWHHLLARKTKHTLSLSVDRRSYTTP
NPYPQSTSAETNNPVYVGGYPVGVKQNCLSISSRFRGCLRNLQLVKSHQNDALDLSSAHF
LMGVTPNSCPVA
NT seq
9219 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgttgctattgttgctgctgatggagcgagctgcagctcagcagcgaggtctg
ttccctgccatcttgaacttagccagtaacgcagtgatcagcagtaacgccacgtgtggg
gatccagaaccagaagtttactgtaaactggtcgaacacgttccaggacgactgatcaag
aacccacactgcccgaaatgtgatgccaattctgtcctgtccaaagagcgtcatccgatc
acaaacgccatcgatgggacaaatcggtggtggcagagtccgagtatcaagaacggacga
cagtttcactggatcaccatcacgcttgacctcaaacagatctttcaggtcgcttatatc
atcatcaaggcagccaactctcctcgaccaggtaactggatcctggagcgctctctggac
ggtgtgacctttgacccctggcagttttatgccattagtgactctgagtgtttgactcat
tacaacgtgacgccgaggcttggaccgccgacgtacaagagtgacaaggaggtcatctgc
acgtcgtactactccagactgaaccctctggaacacggagagatacacacctccctgatt
aacgggcgacctggagccgatgatttgacctctgatctcctgaacttcacgtcagctcgt
tacatcagactgaggcttcagcgaatcagaacgctgaatgccgacctgatgacgctgagc
gcccgtgacccccgagacattgaccccattgtaacccggaggtattattactccatcaaa
gacgtgtcggtgggcgggatgtgcatctgctatggccacgcccagagctgcccacttgac
cctgttaccaagaagctccagtgtgtgtgtgaacacaacacctgtggagagagctgtaat
gagtgttgccctggttaccaccagcagccatggcaaccaggaaccatctccgagggcaac
acatgtgaaaagtgtaactgtcacaacaaagcagtcgactgtttctacaatcagaccgtc
tctgaactctctctgagtttaaactctcgcggcattcgtcgaggaggcggagtctgtatc
gactgtcagcagaacaccgccggcatcaactgtgagacctgtgccgctgaatactacaga
cctgctgaggtttctccgtattcagacgctccctgtgaggagtgtaactgtgacctgaga
ggttcagagtcttcagtctgtagcagagatgactcacgaccaggtgtcttggcaggtcag
tgtgtgtgtaaggagggttttacaggtcgacagtgtgatcgttgtgcgtttggatacaga
gattttcctcggtgtgttcgctgtgagtgcaacctgtctggcagcatcaactcagacccc
tgcagcccctgcatctgcaaggtgaatgtgatgggagctcactgtgatctgtgtaaacca
ggtttctataacctgcaggagaataatccgctcggctgcaccgactgtttctgtttcggt
gtgtccaatgtctgcgagagctctgcctggctgacagctcaggtgtatcatgcagacgct
ttgctccgtccctctcagtccccccacatcctcgctgtcgtacaaggcaatgacctcccc
atcctcagcaacatctctttaggccacccccaccaacaagtgctttcttgggtggcgccc
gagagtttccttggcaacaagctggtgtcgtacggaggtttcctgaacttctcagtggtt
tacaacgtcccactggacaatgaagatcattctcttctcgcccactgtgacatcattgtt
gagggaaacggtcgagctctccatctctcacctcctcatctcttatctctctctcctctg
gctgaacacttcgttgctgtgacgatggctcagaggcaatttgtggacattcagacagga
tatcacgttacccgtgatgacctgctgtcagtcctagctgatgtgatatcactaagggtc
agagttcatctgaatgcctccgctgagggaccaatttatctcagcttcctgtctctggac
gttgcagacaatggctccatttctggtgatcaggcggttagcgtggagacgtgtgagtgt
ccgtgggggtacagcggcacttcctgtgagacgtgtctcccggggttcttcagggtggga
ggagttttgtttggaggaaactgtttgccgtgtgaatgtaacgaccacgccaccgagtgt
gacagcagtggagtctgtgtgggttgtacccataataccaccggtcctcactgtgatacg
tgccttcctggtttctatggtgacgctacagaggggacagcagatgactgtcggcaatgt
ctgtgtcctctgatgtccaacagttttagtcccacctgtgtgctggagccttcaggacag
gtgtcatgtgaccagtgtcaggtcggatacacaggaaccagctgtgagaggtgtgccagt
ggtttctttggaaacccattggtagtgggcggggcctgtgtccactgtgagtgtcatggt
aacgtggatgtcagggaggcagggcactgtgacaccgtcactggggaatgcctgcgttgc
ctcggcaacactgctggaagacactgtgaggtctgtcagcccggttactatggagacgct
gtgaaccggaaggactgccgggagtgcagctgtgatgtcagcggtgccctctccagtgaa
tgtgatgtcacaacaggtcagtgtttgtgtagagagaacgtgacaggacgcacctgtgac
cgctgtcagtcagggtttttcgggctgcagagtgggcagggctgttggggatgtggctgc
agccaatcaggatctctctctcagtcatgtgatgagaaggggcggtgccaatgtgcggtt
ggtgtggcaggagacaagtgtgaccgctgtagccgtggttactatggtttccatgccaaa
ggctgcaaagcatgcacctgtgatcacactggagggaactgtgaccccgagagcggcgag
tgcatctgcccggccaacacgcaaggggacacctgcgacaagtgtaaggcaggacactgg
ggtcatgaccccgctgctggctgcaagccgtgcagctgcaatgcaggaagctccgcccct
cagtgtgatctgaccaatggacagtgtcggtgcagggaggggttctctggcaggtcatgt
gatcagtgtgcgcctggttactatggttacccagaatgctcggcgtgtggctgcgatgtg
gcgggaacagacgagaggttctgcaacacgacgctcagagtgtgtgactgcggacacacc
ggagagtgtgtgtgcaaggtgggcgtgtctgggcggcgctgtgaagagtgtgtctctggt
tggttcgctctctcagctgacggctgctcgcagtgtttctgttcagggctcagcagagac
tgtgaggagaagggaggactctacagagtacctatcaccctggctcgctcgcccgctctc
ttgtcattggtcagtcagtccaatctgcaggctgtagagtctggagttttcctgcagggc
ggagtcatgcttctcgacacccgacacctcaactccagcaggttggctggacccctatac
tggagactgcccccgcagtttggaggacgccagcttctgtcgtacggtggcctgctgtct
tacatcatcactttctacgctgaggatggcttggggctgtccaatcaggagcctcaggtc
ctgatgaggggagggactctgaagaagctggtgatatacactgacatggctgctcctagc
aacggtatcaggacacagcatgacatcatgatgacagagcacaggtggaagtactttaac
tcggtgtgggaggagccagtgagtcgctctgacttcctgtccatcatcagcgacatcgag
tacatggtcatcaaagcttcatacgggagtagactgcagcagagcaggatctctaacatc
accatggagacggctgtggaggcggagtcactggaggggtcagaggttggagtgggagtg
gccagacatatcgagtcctgcgtctgtccacctggatacaccgggctgtcatgtcaggac
tgtgctgcagggtatttccgtcagcctctgtctgagttgtcatctcagagtttgaagtct
cagtttgttcgtccgtgtgttcgatgtcgctgcaacaaccacagtgagagctgcgacatg
aagactggagactgtcagggctgtcagcatcacacgagtgggcggagctgcgagatctgt
gccccggggtattatgggaatgtcagcggctccatcagtgattgctccctctgtgcctgc
cctctacaggacaacagtttcagtcccacctgtgtgtcagaaggagcatttggtgatttc
cgctgtgacacctgtcaggagggatttgaggggagatactgtgagaggtgttctgttggt
tactatggtaacccgtcattgcctggtggggtgtgttcacggtgcacctgcagcaggtgg
ggctccctgcagccgcactgtgacgcgctaaccggacagtgtgactgtaaggacggggtc
aaaggtcagtcatgtgaccaatgtgacgagaggcacatcctgcagggaggattctgtgtg
tcgtgtgatgacgagtgttctggcgttctgttggacgacctggaaaaagtcaacaaccac
ttcctgtctgttaacttgagcagcattgccatggcaccataccgccagctggtgatgctg
gagaaccagaccagagaccttcaggtgctgttttcacaaaacacttctgttgccctgcat
ctgtccagagctgaagatgagttaaattatttgacctctgaccttgggcctctgctgcag
cagctcacacgtctgtcaaaccacctggagaacgtgttcatgtccaccaacaacagcctc
tcgcagggtgcactactgctggagagcatcagcagccttcaggacaacattcaggcgctt
cagaggggggcggagcttctgaaccagaccacagaggaggagcttgattcagccaatcaa
actcgcctgctggcacaggtgacgtccatgttagaaaacatcagaaccatcaacctaacg
gacgccaatgttgcagccaatcaggagctcagtctctctgagtctctcgtccactcgctg
cagtcgcatttcctttccaacagagtgacggttgatgacaggctccgccccctctcagcc
aacctgacgggtggcatagaaacactacagttcacacatacacagctgagcagtgctgtg
aaacaaaacaaagaaacacactctctactggacaacgcacacactctactgcagcagtac
cagtccgaccgtcagaacctgagcgctgcgtgtgtgttcctgggcggagtaatggaggac
agtcaactgctgctggacgacaccatcagcctgacggaggagcttacaaacaccacctca
caggtggaggtgtttagcagtcatctggatcagtggcgccccctgctgaggaaacaggtt
gatggtttggttgttggactgaagaggacagacgctctggaaaatgtttaccgtgcagaa
agccacgcacaccagctgcagagccactcccattccctgcacagctcgctgtcctcagtg
tggaatgtctctcagaacggcagccgattggttcagctggacagtgacatcagagaacga
gttcactttgcccaacaggttgccttgatcgcccataactcggcctccctcgctctaaac
atgagcatccaatcagagcagtcgcttttagaagagggcggagccaaactgaacatgagc
tcagctgttttagaagaaagtcaaagaatcaacgacacatctgaagacctacagttgaat
gttaccttggtaaccagcaggctaggattggtcagagaaagtatccataactccagcagc
ctgctccgtcagccaatcaaagagctgctccacctctctaacggatcagctgtgacactg
cagcaggctcagcttcaggctgcagcggcacactccggcctgcagggcacgctgcatcgt
ctgcacacactcagtcagcagctgcaggattcttcttcagtggtggagaacaccaacatg
acagtgagggagaccaaccagctggtgaaggacacacacaccgcagtcaatgaggcgcag
cgtaagctggaggaggtgggccatcgtacagagcgactgatggaccggataaagccgctg
agcatgctgggagaaaatctgagcaggaatctgtctgacatcagagagctgatcgatcag
gctcgaaaacaggccgcctcgattaaggtggctgtgcaggcggacagagactgcgttcga
tcctacaaacctcagattcagtcgagtaacttcaacagtctgagtctgaccctgaagacc
aggagccccaacaacctgctgttctacctgggcagcaactccacggcggacttcctggct
gtagagatgcatgatgggaaagtgtctctgctgtgggatctgggctcaggaagcagccgg
ttgacgttcacggggctcaacatcaacaacaaccgatggacacgaatcaacgccacacgg
ttcggggcacacgcagctctgtcggtccatcagctggagtcagaggctgctctgttgcca
gcggtaactgcgacatcacctggaccggcccgagttttagaagtgaacgaaaactctgtg
atccatatcggagggaggagcttacacacacagacccctgccctgcttcgctcctccacc
tttcagggatgtgtgggtgaagcgacgctgaacgagaggaacgttggtctgtggaactac
gttagcagagagggaggctgtggaggctgcttcagcagtcctcaggtggaggagacgtca
ttccactttgatggttctgggttctcattggttcaaaaatctctgcgagcgacttcaacc
tccatcgtgctgctttttaaaacactgtcgccaggtggattacttctgtacctgtcctcc
aacaacactagagacttcctgtccatggagctgatagaggggcgtgtccgtctgaccttt
gacctcggctcaggtgctctgatcctcacttccaacaggaagtacaacacaggagtttgg
tacaagatcacactgcagagaagcaaacgcaaaggttatctgtctatcatggcagccgac
caatcatcagagaaggaggttttggaggcggagtctcctggaacagcctccgacctgaac
cggtccgatctggacccaatctacatcggaggacttcctgcctccagaccaatcaggcga
caggtggtgtccaggtcgtatgtgggctgtataaaaaacgtggagattgctcgctcaaac
tttgacctcctgagagacgcatatggggtcaggaagggctgcgtactcgaggctgtcaga
agtgtgtctctgctggctggtggcttcgttcagatcgcacctcgatcgttcggtctggag
gcggagcttcttttctccttctcatctaacaaccaatcaggagtcctgctggctgccttc
agtgacacacagacagacagacagttcttcttgtctgtccacctggtctcaggttcatta
gaggtggagcttggtgaggtgggcgtggctactcggagggtgatggtggtgaaacctgat
ggtggatccttcagcgacggaaccaaacactcagtgattatcgccatcaacaggaagtct
ctgtccctgcaggtggacgaagaacacaaaaagtcggtctctctgttggcgggcgggttt
tctcgtctgtctccggcctctttgttcattggtggaatcccatcaggggcggagtctcgt
ctgccaatcagattacaggatgtgtcaaggtggttcagaggctgcatccaacatctggtg
gtgggcggagcgcttgtcgacctatcagaggctgtgaggtatgagggggcagagcttgat
agctgcctgttggaggagagagtcgggggggcggtgcttcctgatgaccaggatgtagaa
ccaactcctgacccctcccacctgcctttagccccacccacccacctgagtgccctaaca
cctggcgcactaatgtgcgtgtcggaggcggagcctaccttcctgcagtcggctgctcag
tttggtttgtcgaaacacagtcacatgaccttcatcatcaaacctgacaccgtgaaacgg
aatgtgtcggtgaggttgtcggttcgaagccgggctctgaacgggctgatcttcctcctc
tctgacgccaaacagaacgacttcatcatcctcagactgaggggggggcggctgatgatg
tcagctaacctggggaaaggccccgcctccatcacctcgtctgtccctattaacgacgga
gcgtggcacactgtgagcgcagagcttggccgacggtctctggtggtgtcggtggacggt
tcgagacctgactcagtgtcagttaaaggaaatcagctggacgtggaggacagagtttac
ctgggtggacttcctcacacacacgcctccagaaggatcaatgtcagcagcagttttcca
ggttgtgttcactctgtcagtttgaacagagtcatgttggatctgtccaaaccagcttct
cagcatgatgtcacttcctgtttcactaatgaccagacaggaaattacttcaatggcagc
ggatacgccgccctcatgcgggatggttataaggtcggctcagacctgtcagtgtctctg
gagtttcgaacgagccaatcggaaggagtctttctgggaatcagcagcttgaaggttgat
gccatcgggctggagatgatcaatggacagctggtgtttcatgtgaataacggggcgggg
cgagtgtcggtgcgttcgattggtcacatgttgtgtgatggacggtggcaccacctgctg
gccagaaaaaccaaacacaccctgagcctaagtgtagacaggcggagctacaccaccccc
aacccttatccacaatccacctctgctgagaccaacaaccccgtttacgtgggaggatat
ccagttggggtgaagcagaactgcctgtcgatcagctccaggttcagaggttgcctgagg
aacctgcagctcgttaagtctcatcagaatgacgctctggacctgagctccgcccacttt
ctgatgggtgtcactcctaactcatgtcctgttgcctag
DBGET
integrated database retrieval system
