Semicossyphus pulcher (California sheephead): 138595800
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Entry
138595800 CDS
T10596
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138595800 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
138595800 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138595800
NCBI-ProteinID:
XP_069523333
LinkDB
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Position
Unknown
AA seq
792 aa
AA seq
DB search
MNSGLPASAAPLGGAGIPNVKVKFCRYYAKDKTCFYGDECQFLHEDPSMASLPLHGGGGS
PVPLSMAGGGGTPAGYSLGGSAAACSGGGTGVSKKSEPLGPAGTSLEGQLLTIPVMEGTT
LSDANLTNSYFSSSFIGVNGFGSPAESKYSMMQRMTTSSSSPSLLNDGAKNFSHSAHDPV
NSPTSSLFSDFGALSISQRRKTPNPAASEFIPKGAPRMATMAQSTVQAFPSPLFPHPSLS
SSTAAALAPGMSLSAGSSPLHSPKITPHSSPAPRRRSHTPNPANYMVPTTASDPGAHIIQ
KETVGGTTYFYTDNTPAPMAGMVFPTYHIYPPTAPHVAYMQPKANAPSFFMADELRQELI
NRHLITMAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFSYITSCYKAVNSKD
DLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNSVTLREVFTTKAFGDHSLVFSYDFHAG
AETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHTA
GLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVVL
ALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSVNDIMPMIGARFYT
QLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFR
DHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFDST
FQELQAAASGSL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggactcccagcttcagccgctccgctcgggggtgccgggatacccaacgtc
aaggtgaagttctgccgatattacgcgaaagacaaaacctgtttttatggagacgagtgt
cagttcctgcatgaggatccgtccatggcgagcctgccgctgcacggaggcggcgggagc
cccgtcccgttgtccatggccggaggtggcgggacgccagcggggtattcccttggtggc
tccgcggcggcctgctcgggcggggggaccggtgtgtccaagaagagcgaaccattgggg
cctgcaggcacgtctctggaggggcagctgttaaccatcccagtgatggagggcacaacc
ctgagcgatgccaatcttaccaactcttacttcagcagcagctttattggggtcaatggg
tttggaagcccagcagagtctaaatactcaatgatgcagcgaatgacgaccagcagcagt
tctcccagtctcctcaacgatggtgccaagaactttagccacagcgctcacgatccagtg
aattcccccacatcttcactgtttagtgattttggtgctcttagcatttcccaaaggaga
aagactcctaacccggcagcaagtgagttcatccctaagggagctccacgtatggccacc
atggcgcagtccactgtccaggccttcccctcgcctctcttccctcatcccagcctcagc
agctccacagctgctgcgctggctccaggcatgtccctgtctgcgggatcttcgcctctc
cactctccaaaaattacacctcacagctcacctgctcctcggcgacgcagccacacccca
aaccctgccaactacatggtgcccaccactgcgtctgacccgggtgctcatataatccag
aaagagaccgtaggggggaccacctacttctacactgacaacacaccggcaccaatggct
gggatggtgtttcctacctaccatatctatccccccaccgctccccatgtggcttacatg
cagccgaaagcgaacgccccatctttcttcatggctgatgagcttcgacaggagttgata
aacagacatctgatcaccatggcccagattgaccactcggagaacccagatgtaccatct
gaggtggatagctaccacagcctgttccccctcgagcccctcccccctccaaaccgcatg
cagaagaccagcaacttcagctacatcacctcctgctacaaggcggtcaacagcaaggac
gacctgccctactgcctgagaaggatacacggtttccgccttgtgaacaccaagtgcatg
atgctggtggacatgtggaagaagattcagcactcaaactctgtgacactgagggaggtc
ttcaccacaaaggcctttggagaccactcgttggtgttctcctatgacttccatgcgggt
gcagaaaccatgttcagcagacacttcaacgacccagcagcagactcgtacttcaccaag
aggaagtggggacaacatgagcctccccctccgcggcagcacgcaggtctgctcccggag
tctctgatctgggcctacatcgtccagctgagctcggccctgcgcaccatccacactgcc
ggcctggcctgccgtgtgatggaccccagcaagattcttattactggcaagaccaggtta
cgggtgaactgtgttggggtgtttgatgtcttaacttttgacaacagccagacgaatcat
cttgccctaatgccacagtaccagcaagcagacctagtgtcgctgggcaaggtggtgctg
gcgttggcgtgtaactccctggctggcattcaaagggagaacctgcagaaggccatggag
ctggtgtccatcaactactcttcagacctcaagaacctcattctgtatctgctgactgaa
cagtctcgcctgcgcagcgtcaacgacatcatgcccatgatcggagctcgattctacaca
cagctggatgcatcgcagatgaggaatgatgtcatcgaggaggacctggccaaggaggtg
caaaacggccgtctcttccgcctgttggccaaactgggcaccatcaacgagcggccagag
tttcagaaggacccgacgtggtcggagacgggcgaccgctacctgttgaagcttttccgg
gatcacctgtttcaccaggtgacagaagccgggacgccctggatcgacctcagccacatc
gtctcctgcctcaacaaactggacgcgggcgttcctgagaagatcagcctggtgtctcgg
gatgagaaaagtgtcctggttgtgacttactcggacctgaagcgctgcttcgacagtacc
ttccaggagctgcaggccgcggcctccggctctctgtag
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