Semicossyphus pulcher (California sheephead): 138596044
Help
Entry
138596044 CDS
T10596
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spul04040
]
138596044 (trpa1b)
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138596044 (trpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
138596044
NCBI-ProteinID:
XP_069523721
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MNFSREVARQTSCYTYVIEDEDPTGACLNVFELAEKGDLALLENLVRKSPEVLSEKDELG
ASPLHHAAAGGYITLIQFITTVIDPKEWNSCDDQGNVPLHWAVEKNKPESCRAFLDLGAN
PNMLNTALLSPLHLAVSLGHNNLVELLLSYSSTDCNLQGDLGNTPVILACSINNCEAINI
LITHGARICQQNKLGHFPIHAAAFAGAKKAMEVILKAGVKMGHQTESHINYSDKSRSSPL
HLAVRGGNIDTIRLCIATGAKIDQQQNDRSTPLHLACTQGATEVVKLMLSSVDQVEDVIN
LTDGACQTPLHRATIFDHAELAEYLISLGADLNGIDCKGHSPLLLASSCGAWKTVTLLLT
KGANINVKDRRGCNFLHLAILQPKGLKNLSEEVLQHNSVKALLSCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCHRLLETITDSRLLNEGDER
GLTPLHLASKEGHTKVVQLLLRKGALFHCDYKGWSCLHHAASSGYTQTMEILLSANPKLL
DKTDEDGNTALHIAAREGHVAAVRLILARGAELVLNKNDTSFLHEALLNGRKDVVNAVID
TDRIAEALRLFTAESSQRCPILDMIEFLPDTFKHLLDNCVRESDDDHNSPNYHIEYNFAF
LQAPLIKLKTTKSKIPPLAALNAMVQYHRIELLNHPVCKKYLAMKWVAYGSIAHLLNMFL
YLLGLLPLTHLIINLRPSMNTTATGEHNITMVPISFMEQSLFLSFCMVMVLVMNIHSIVK
EVVQIAQQRSNYFRDFSNHSDWLSAIFSLLFIIPLMLNVEGSLHWQAGAMAVLNSWIGFL
LYLQRFEGIGIYVVMFGEILKTLMRIVTLFMYLLLAFGLAFYALMLNQKEFDNVPLSVMQ
TFVMMVGELNYQNNILDTYLKRELAFGPLTYFVFINFVLLIPILLVNLMIGLAVGDIAEV
QRNAALKRIAMQIDLHTALEDKLPYWFLKRVDKPSIVSYPNRKCSKSFIWNMITGEEETE
AWSRVQAKSQGCSQIQNELLKQKNRMKEMSSMMEKQHNLLKLIIQKMEITSEADEHDGPV
NRGNMWPCLSQAKCRAPSVSRWVPLMKAIEGRRK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagggaggtggcccggcagaccagttgttacacgtatgtgatagaggat
gaagatccaaccggggcatgccttaatgtattcgagttggcggagaagggcgacctggct
ctcctggagaacctggtgcggaagagcccagaggtcctgagtgagaaagatgaattagga
gccagtccccttcatcacgccgcagcggggggctacatcaccctcatccaattcatcacc
actgtcatagacccaaaggagtggaacagctgcgatgaccaaggcaacgtgccgctgcac
tgggcagtggagaagaacaagccggagagctgcagggcctttctggacctcggggccaac
cccaacatgctcaacacggccctcctgtcccccctgcacctggctgtcagcctgggacac
aacaacctggtggagctgctgctgtcctacagctccacagactgtaatctccagggagac
ctcgggaacaccccggtgatcctggcctgctccatcaataactgtgaggctatcaacata
ttgataacgcacggagcgcggatctgccaacagaacaagctcggccatttccccatccac
gcagctgcctttgcaggtgcaaagaaagccatggaggtgatcctgaaggccggagtgaag
atgggccaccagactgaaagccacatcaactattcggacaagtcgaggagcagtcccctt
catctcgccgttcgtggcggaaatatcgacaccatccgtctctgcatcgctactggggcc
aaaatcgaccagcaacagaatgacaggtccacgccgcttcatttggcctgcacccagggt
gctactgaggtagtcaagctgatgctgtcctccgttgaccaagtggaagacgtcattaac
ctgactgatggggcgtgtcagacccctctgcacagggcgacaatatttgaccacgcagag
ctggcagagtacctcatttcattgggtgcagaccttaacggcattgattgtaaaggacac
tctcccttgctgctcgccagcagctgcggagcgtggaaaacggtgactctgctactgaca
aaaggtgcaaatattaatgtgaaagacaggcgtggatgtaacttccttcacctggccatt
ctgcagccgaaaggtctgaaaaacctctcagaagaagtgctgcagcataacagtgtgaag
gcgttgctgagctgcgaggataatgagggctgcaccccgctccactacgcgtgcagactg
gggatccatgactcagtgaagaacatgctgggcctctcggggcaggtcggcctcgcatgc
aagtccaaggacaagaagtctgccctgcactttgctgctcaatacgggcgcattaatacg
tgtcacaggttactggagaccatcacagactctcgcctgctaaatgagggtgatgagcga
ggtctgactccactccatctggcttcaaaggagggacacaccaaagtggtacagctgctg
ctgcgcaaaggggctctctttcattgtgattacaagggctggagctgtctgcaccatgct
gcatcttcaggatacacacaaactatggaaattctcctgtcagccaatcccaagttactg
gataaaaccgatgaggatgggaacactgcgctccacatcgcagcgagagaaggacacgtg
gctgcagttaggctcatcctggctcggggagcggagctcgtcttaaacaagaatgacacg
tcgttcctgcatgaagctctgctgaacgggagaaaagatgtggtcaacgctgtgattgac
actgacagaatagccgaggctttgagattgttcacggccgaatccagccagcgatgcccc
atactcgatatgattgagtttctgcctgacaccttcaagcacctgttggacaactgcgtg
agggaatctgatgacgaccacaacagtcccaactaccacatcgaatacaatttcgcattt
ctccaagctcccctgatcaagttgaagacgacaaaaagcaagatcccgccgctggctgcg
ctcaacgcgatggtgcaataccaccgcatcgaactcctcaaccacccagtctgcaagaag
tacctagcaatgaagtgggtggcctatgggagcatagctcatctgctcaacatgttcttg
tacctgttaggcctgctgcccctcactcacctgatcatcaatctgaggcccagcatgaac
accactgctacaggcgagcacaatatcaccatggtgcccatatctttcatggagcaaagc
ttgttcttgtccttctgcatggtgatggtcctggtcatgaacatccactccatagtgaag
gaagtggtgcagatagcacaacagcgttcgaattactttcgggatttttccaaccacagc
gactggctttcagccatcttctccctcttattcatcatccccctcatgctcaatgtggag
gggtctctgcactggcaggcaggggcgatggcagttttaaactcctggattggatttctc
ctttatctccagagatttgagggcatcggcatctatgttgtgatgtttggggagatcctg
aagaccttgatgcgtatcgtcacgttgttcatgtacctgctgttagcattcggtttggcg
ttctacgcgctgatgctcaaccagaaagagtttgacaacgtgccgctctcagtcatgcaa
acctttgtgatgatggtcggtgaactgaactatcaaaacaacatcctggatacgtatctg
aagcgcgagctcgcttttggtccgctgacttacttcgtttttatcaactttgtgttgctc
ataccgatcctgctggtgaacctcatgatcggtttagctgttggagacatcgctgaagtt
caaagaaatgcagcactaaaaagaatagccatgcagatcgacctccacaccgctttagaa
gacaagctgccgtactggtttctaaagcgagtcgacaaaccctccatcgtcagctacccc
aaccgcaagtgctccaagagttttatatggaacatgatcacaggcgaggaggagacagaa
gcgtggagtcgtgtgcaggccaaatcccagggctgctctcagatacagaatgagctcctg
aagcagaagaacaggatgaaggagatgtcgagcatgatggagaagcagcacaacctcctg
aagctcatcatccagaagatggagatcacctcggaggcagacgagcacgacggccccgtc
aacaggggcaacatgtggccatgtttgagtcaggccaaatgcagagcgcccagcgtgtct
cgctgggtccctctgatgaaggccatcgaggggaggagaaaatga
DBGET
integrated database retrieval system
