Semicossyphus pulcher (California sheephead): 138596229
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Entry
138596229 CDS
T10596
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1-like protein 1
KO
K04987
polycystin 1L1
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spul03037
]
138596229
04040 Ion channels [BR:
spul04040
]
138596229
Cilium and associated proteins [BR:
spul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138596229
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138596229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PLAT
PKD_4
GPS
Ig_3
Motif
Other DBs
NCBI-GeneID:
138596229
NCBI-ProteinID:
XP_069523953
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MVLLFNHTGTVVVELQAENQVSFQNKSASVYVELNRKSSPQVRFNPTWQPPTSQSPAQTL
ADNVQIYAAKQAYPTNTDVTLLAVARVPDPVELLWHFGDSESVRTTSRTITKRYQRPGRY
DVVVVMSSSGTSVTSNVFPLVVQRAVKLNRLLHSASVLWNQTVTVSCRVNGGTDVNFLWS
FGDGSPRVGQSTEQHVFRRTGEFTVKVTVSNLVSSASLSSHIFVVDRPCQPPPVKNMGPL
KLQVRRYEVIRLGVTFETEVDCDISGGLQYTWTLFDSAGRVFPLSSLDTHRQSLVLPSHL
LHYDTYTAVARVQVVGSVVYSNYSVRVQVIPSPPVAFIQGGTNSFINNRNASSVTLDGRR
SYNPDFPMNSVSFTWTCKPVSSIATSCFHQDVSNSSPVLVFPASFLKQNFDQFKFTLTIH
SGDRSASAETFLTLTPNVMRKLSVYCPLCRGDQLNWDQPLSVQALCEGCDTSSKYIQYSW
SLYLVNASSKPVLEVPFCYAVDLGAPSTILEGSATPPQTPGTSTLHPPVTNAFTRAVSAF
ETRAKKPNLDSTDDATSPKTYIKKSTMAGLTDTEPISSVLNPRTAGSGEEPFYHPQGEFD
PPEPFYSSTEYQTPALDNSSVLYSDHSGRSDVISDFPIDSESSADWEFSFPVLESGDLED
KLGETKMSXNFQYVTLLCFKTDPVTDSDYDVALMSPEEGDPGISAGRPTGVDGETFSPVD
ESVFDPALHEDQGSNLVDDRPSVAFQDPVLLDLPRDPVDRGLFESYTYTGISSPSLSFRP
FSLRPGSRYMLEVTAKSHDSFLGRTQLYLKTNPAPKGMTCQVQPTTGMELYTHFSIFCTS
GKEDLQYEYSMSVGDRPPRMLYQGRDFQYYFSLPSGHPNDDYKVTIYTVIRSSTHGTATK
PCPVTVRVQPSFFRDTSSSSRLDPDLELSEEGLRNLSALVQLGNSMEIRNYISLLSIILN
KLSLDAEANAQTQKHTRNVLICTLCELESSDQASMVDNICILKNLLQVTNEVSFGSARRV
TGHLQVLSERLSQSSAPGLYHLDQKTLITLVALLSYSLQAGVCSRDIKRTSESDTHDENI
PANGCVPDSSNGVYIEKLGSISTKRKMQLVADILQTASDLMLKYILLHEVPEHRVSTGFI
VLHARYQNQTSTIISSGSSTFVLPSSLIQHLFSQPRRDTERPCVLSMLTELSHSPYTWAH
QPGRLSGPVVDLSLYTCSTRRKIPVHYLIQPINIELQPPQQKKSSERQYILLRSQINYHS
FNVTQEHSQQAIQLSVVFTRTLNKAFPVMLLFRMFERPTPSMHHLHRIHRWESNTTRFTL
PQSYLSAAGVGHLALLNADFGKAAKHQHLSEQVSYSLTVDSSLCLSWDGQQGAWAQRGCT
TQQADTSAAVNCSCHQLKPLTVVRQQIQSSHETAGLDPFLSVSTDLSVLGVLVLCVCLYI
PALVVCKRADVASEGNRRVHFLSDNSPTDPYLYAVTIHTGPCSAAQMSAKVYIVLLGEDG
VSQTKELQVPGCTRFRRNSQDTFIISAADSLGPVWGVHIWHDNSGPSPTWYLKQVEVSEV
NRGHVKGRAWLFVGQSWLAVNKDDGRVERMLRVCTQGMGFAKMFLSKLSDYVTDHHMWIS
VHSCPCLSSFTHTQRISVSLLLLLGYACVNTVMITQMDDQVLFEVGIIDVSAVSVTTGVI
SVIAVLPAAAFISFLFRLREVKLAGSEVQHAKCRNTEKDFFEDALPGTDSMSEPHLFWSS
IQQWVQDTWRSKYQGTDLESVSATCWE
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggttttgctcttcaaccacaccgggacagttgtggttgagcttcaggctgagaatcaa
gtgtcttttcagaacaaaagcgcgagcgtgtatgttgagttgaacaggaaatcatcacca
caagttagatttaatccaacatggcaaccacctaccagtcaaagtcctgcacagactctg
gctgacaatgtgcagatttatgcagcaaagcaagcttatcccacaaatacagacgttact
ctcctggcagtggctcgagtaccagaccctgtggagctcctctggcactttggtgactcg
gaatcagtcagaaccacttcaaggaccatcaccaaaagataccaaagacctggcaggtat
gatgtcgtagtcgtcatgtcaagcagcgggacctccgtcacctccaatgtgttcccgctg
gtcgtccagagagcggtgaagctcaacaggctgctccactcggcttctgtcctgtggaac
caaacggtgacagtgagttgtcgggtcaatggcgggactgacgtcaacttcctgtggagc
tttggagacgggtcccccagggttggacagagcacagaacaacacgtcttccgcaggaca
ggagagttcacagtgaaagtaaccgtgtctaacctggttagctcagcctctctaagtagt
cacatctttgttgtggaccggccttgtcagcctccaccggtcaaaaacatggggcctcta
aaactacaggtgagaagatacgaggttatccgtctgggggtgacctttgaaactgaagtc
gactgtgacatttcaggaggccttcagtacacctggaccttgtttgactctgcaggacga
gtcttccctttgtcttctttagacacacacagacagagcctcgttctgcccagccatctc
ctgcactatgacacgtatactgctgtagccagggttcaggtcgttggcagtgtggtgtac
agtaactacagcgtgagagtgcaggtgataccaagcccccctgtagcttttatccagggc
ggcaccaacagcttcattaacaacagaaacgccagctcggtgaccttggatgggcgaaga
tcttacaacccggacttccccatgaactcagtcagcttcacttggacatgtaaaccagtc
agctccatcgccacctcatgtttccaccaagatgtttccaattcttcccccgtgctcgta
tttcctgctagtttcctgaaacaaaactttgaccagttcaagttcacgctcaccatccac
agtggtgatcgctcagcctcagcagagaccttcctcacattaacacctaatgtgatgagg
aagttgtcagtttactgccctctttgccggggagaccagctgaactgggatcagccgctc
tctgtccaagccttgtgtgaaggctgtgatacttcctcaaaatacatccagtacagctgg
agcctgtacttggtcaatgcatcctcaaagcctgtcttagaagtcccgttttgttacgca
gtggatctcggtgctccgtcaaccatcttggagggttctgcaactccccctcagactcct
gggacgtccaccctgcatccacctgttacaaatgcgttcacacgtgctgtcagtgccttt
gaaacaagagctaaaaagccaaatctggacagcaccgatgatgcaacatcgccgaagact
tacataaagaagtcgactatggctggtttgacagacactgagccaatctcttctgtactc
aatccaagaacagcaggctcaggagaggagcccttttatcaccctcagggggagtttgac
cctccagagcctttctactcctccactgaataccaaactcctgcccttgacaacagcagc
gtcctatactcagaccactccggccggagtgatgttatcagtgattttccaattgattct
gagtcctctgctgactgggagttttcttttcctgtcctggagagcggtgacttggaagat
aaactaggtgagacaaaaatgagctgaaattttcaatatgtgactttattgtgctttaaa
actgatcctgtaactgattcagattatgatgttgccttgatgagcccagaggaaggagac
ccagggatttcagcaggacgacccacaggtgtggatggtgagaccttcagtccagtagat
gagtcagtgtttgatccggcattgcatgaagaccaggggagtaatctggtggatgacagg
ccgtcggttgcgtttcaggacccagtcctgctcgatttaccacgagacccagtggacaga
ggcctttttgagtcctacacatacacaggtatctcctctccttcgctcagctttagaccc
ttcagtctgaggcctgggagcagatacatgttggaggtcacagccaaatcccatgacagt
tttctaggccggactcagctgtacttaaaaaccaaccctgctccaaaaggcatgacgtgc
caggtgcagccgaccacaggaatggagttatatacacacttcagcatcttctgcacctca
gggaaagaggacttacagtatgagtacagtatgagtgtaggagacagacctcccaggatg
ctgtatcaggggagagacttccagtactacttcagccttccttctggccatcctaatgat
gactacaaagttactatttacacagtgatcagaagcagcacccatgggacagccactaaa
ccttgtcctgttactgtccgggtccagccgagcttcttcagagacacatcttcttcttct
cgtcttgatcctgatctggagctttcagaggaaggtctgaggaacttatcagctctggtg
cagctcggtaacagtatggaaatccgtaactacatcagtcttctctccatcatcctgaac
aaactcagccttgacgctgaggccaacgcacaaacacagaaacacacacgcaatgtgctc
atttgcacactgtgtgagcttgagagcagtgaccaggcatcaatggtggacaacatctgc
attctcaaaaaccttttacaagtaacaaatgaggtaagttttggaagtgcaaggagagtg
acaggtcaccttcaggtcctctcggagcggttatcgcagtccagtgctccaggcctgtac
catctggaccagaagacactcatcaccctggtcgccctgctctcatacagcctgcaagct
ggagtatgtagtagggacatcaaacggacatcagaatcagacacacatgatgaaaacatt
cctgcgaatggctgcgtaccagactcatcaaatggtgtttacatagaaaaactgggatcc
atttcaacgaagcggaagatgcagcttgtagctgatattctgcagactgcttcagacttg
atgctgaagtatatcttgcttcacgaggtcccggagcaccgagtcagcaccggttttatc
gtcttacacgccagataccaaaaccaaacttccacaatcatcagcagtggttccagcacc
ttcgtcctgccttcctccctgatccagcatctgttttcccagcccaggcgagacactgag
agaccatgtgtgcttagcatgctgactgagctcagccacagcccttacacctgggcccac
caaccaggaaggctgagtggaccagtggtggacctgagtctgtacacgtgcagcaccagg
aggaagatccctgttcactacctcattcagccaataaacatcgagctgcagcctccacag
cagaagaagagctccgagcgtcagtacatcctcctgcgcagccagatcaactaccacagc
ttcaacgttacccaggagcactcgcagcaggccatccagctgagtgtggtgttcacacgg
acgcttaacaaggcgtttcccgtcatgctgctcttcaggatgtttgagaggccgactccc
agcatgcaccatctgcacaggattcaccgctgggagagcaacaccacacgctttactctg
ccccagtcctacctgagtgctgcaggagtcggtcacctggccctgctcaatgctgatttt
ggaaaagcagccaaacaccagcacctgagcgagcaggtcagctacagtctcactgtcgac
agcagcctgtgtttgtcctgggacggccagcagggggcctgggcacaacgcggctgcacg
acacagcaagcggacacatctgctgcggtcaactgcagttgtcaccagttgaagccgctg
actgtggtgcggcagcagatccagagcagccatgaaactgccggtctggacccgttcctg
agtgtgtccactgatctctcagtgctgggtgtgctggtgctttgtgtgtgcttgtacatc
ccggcgttggtggtgtgtaagcgcgctgatgttgcttctgaagggaacagaagagtccac
ttcctgtctgacaactcacctacagacccatatctctacgctgttacaatccacactggt
ccctgctctgcagcccaaatgagtgcaaaggtttacatagtgctgctcggggaagatggg
gtctcacagacaaaagaactacaagtcccaggatgcactcggttcaggaggaactctcaa
gacacttttataatcagtgcagcagacagtctgggcccagtgtggggagttcacatctgg
cacgacaactctggaccctccccgacctggtacctcaaacaagtggaggtgtctgaggtc
aacagagggcacgtaaaaggacgtgcttggctctttgtgggtcagtcctggttggctgtg
aacaaagatgatggtcgggtggagaggatgctgcgggtttgcactcagggaatgggcttt
gccaagatgtttttgtccaagctatccgactacgtgaccgaccaccacatgtggatatct
gtgcacagctgcccctgcctgagctcgttcacacacactcaaagaattagcgttagcctg
ctgctactcttaggctatgcttgtgtcaatacggtaatgataacacagatggatgatcag
gtgctgttcgaggtgggcatcattgatgtatcggctgtttctgtgacaacaggagtgata
agcgtaatagctgtgctgcctgcagcagcatttatatctttcctattccgactgcgtgaa
gtcaagctggcaggatcagaagtccaacatgcaaaatgcagaaacactgaaaaagacttt
tttgaagatgctcttccagggactgacagcatgtctgagccacatctcttctggagcagt
attcagcagtgggtgcaggacacctggaggagcaaataccagggcacagacctggagtct
gtttccgctacgtgctgggaatga
DBGET
integrated database retrieval system
