Semicossyphus pulcher (California sheephead): 138596677
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Entry
138596677 CDS
T10596
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138596677 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138596677 (robo1)
Cell adhesion molecules [BR:
spul04515
]
Immunoglobulin superfamily
ROBO family
138596677 (robo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
C2-set_2
DUF7908
Motif
Other DBs
NCBI-GeneID:
138596677
NCBI-ProteinID:
XP_069524069
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MFVYSMANRSCGCPPVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLL
FSSQPPQPSSRFSVSQTGDLTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRP
PPVIRQGPTNQTVAVDGTVVLNCVASGNPAPTILWRKDGVLVSTHDSRVKQLDTGALQIR
YAKLGDTGTYTCIASTPSGEASWKAYLEVHEFGVQVQPNRPTDPNLIPSAPSKPDVTDVT
RTSVTLSWKPNLNAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFL
VRAANAYGLSDPSPITDAVKTQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRV
QWTAEQQSQYIQGYKVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRP
FFNEFQGTDSDVKIGKTLEEAPSAPPREVTVTESGDNGTAILVSWQPPPEEEQNGVVQEY
KIWCLGNESRYHINRTVDGSTLSVLIPSLAAGIRYSVEVAASTGAGPGVKSDITFFQLDA
SGRMTETVIQENPLSQQISDVVKQPAFIAGIGAACWIILMVFSVWLYKHRKKRNGLSSSY
AGIRKVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSI
NCCTAGNGNSDSNLATYSRPADCIANYNNQMENKQTNLIVPESGVYGDVDLSNKINEMKT
FNSPNLKEGRFVGPGGQPTPYATTQLIQSAIMGNNINSDRGTGGSGGGGHVVGGEMNEKH
CWKPPSVQQQKQEMASQLQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNS
SDRGSSSTSGSQGHKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMEERWE
MSAQTQRHRQPDSCDPDMQCPMPPSHMYLQPDELEEEEEMERGPTPPIRGAASSPAAVSY
SHQSTATLTPSPQEEMQPMLQEAPDSHERRRHAVSPPPPPRPLSPSHTYGYITSPLALDT
DGMEEEDDILEEEEEEGDETDAEVAKMHYHHTIPHTHPHHPQMHPRRLLLRGLEQTPASS
MGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGLR
VAKYPNTQGHEVGGASARKYQINPSGHRPGSPVSTDSNMSMAAVHRRPPKKQKQHPAVHP
VNQRREVYNEDLPPPPIPPPAVLKSPTHPSKVALEGRGVISPKAGEGRDKRGATGSYRPR
DGSDTRTSSSERRDAQERQKTAHGGKGNKHEGSIANKARQHAGSEDILPYSRPQFPTVNS
PRDPSSSSSMSSRGSGGRRRGEGGRRNPADMGLNTTGAFTQGDEELEMVES
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtctattcaatggctaaccgttcctgtggctgtcctccagtgcccccggcattt
gtggtgagaccaaggaaccaggtggttggcgttggcagaaccgtcaccttccagtgcgaa
gccactggaaacccacaacccgccattttctggcagcgggaaggcagtcagaacctgctc
ttctcctcccagcctccgcagccctccagccgattctctgtatctcagactggagatctg
accatcactgatgctgagcgctcagacgtgggctactacagctgccaggccctcaacata
gctggcagcgtcatcaccaaggctctgctagaggtcaccgacgtcgtgtcagaccgcccg
ccaccggttatccgacagggcccgaccaatcagacagtagctgtggacggcacagtggtc
ctcaactgtgtagcatcaggaaaccccgcccccaccatcctgtggaggaaggacggtgtc
ctggtgtccacgcatgactccagagtcaaacagctggacactggtgcactgcagatccgc
tatgcaaagcttggtgacactggcacctacacctgcatcgcctccacgcccagcggagag
gcctcatggaaagcctacttagaggtgcacgagtttggagtccaagtccagccaaacaga
cccaccgacccaaacctgatcccaagcgctccgtccaaacctgatgtcactgacgtcacc
cgcacctccgtcaccctctcctggaaacctaaccttaatgctggagccacacccacctcc
tacatcatagaggccttcagtcatgcatcagggagcagctggcagaccttggcagagcat
gtgaaaacggagtcatttgtactgaagggcttgaagcccagcgcagtctacctcttctta
gtacgggcggccaacgcctacgggctgagcgatcccagtcctatcactgatgctgtgaaa
acacaagatattcctcccaccagtcagggcgtggaccatcgtcagatccaaagggagtta
ggagaagtggtcatccacctgcacaaccccaccatcctctcctcgtcgtctgtgcgggtg
cagtggacagcggagcagcagtcacagtacatccagggctacaaggtgatgtataggcct
tcaccagaggggcttcagaggagcgagtgggccgtgttcgaggtgcgaacccctggggag
gacagcgctgtcgtgccacagctccgcaagggagtcacatatgaattcaaagtccgcccc
ttcttcaacgaattccagggaacagacagcgatgtcaaaattggcaagacgctggaggaa
gcccccagcgcccctcctcgtgaggttacagtgacagagagcggggacaatgggaccgcc
atcctggtctcctggcaaccccctccagaagaggagcagaatggggtggtccaggagtac
aagatttggtgtttggggaacgagagcaggtaccacatcaaccgcacggttgacggctca
acgttatccgtgctgattcccagtctggctgcggggatccgctacagcgtggaggtagca
gccagcaccggggcggggcccggggtcaagagtgatatcaccttcttccagctcgatgct
tccgggcggatgacggagacggtgatccaggagaaccctctgtcccagcagatctcagat
gtggtcaagcagccggccttcatagcaggaataggagctgcctgctggatcatcctcatg
gtcttcagcgtctggttgtacaaacacagaaagaagaggaacggcctctccagcagctat
gcaggcatacgcaaggtgccttcctttaccttcacaccaacagtggcgtatcagagaggg
ggagaaggtgtaagcagtgctggaaggcctggtttgctaaacatcggggaatcagccacg
cagccctggttggctgacacatggcccaactcctgctccaaccacaacgactgcagcatc
aactgctgcactgcaggcaacggcaacagcgacagcaacctggcaacgtacagccgccca
gccgactgcatcgccaattataacaaccagatggaaaacaagcagacaaacctcatcgtg
ccagagtcaggagtctacggagacgtagatttgtccaacaagatcaatgagatgaagacg
ttcaacagccccaacctgaaagagggccgctttgtgggtccgggcggccagccgacgccg
tacgccaccacccagctcatccagtcggccatcatgggcaacaacatcaactcagacaga
gggacaggagggagcggaggaggaggacacgtggtaggaggggagatgaatgaaaagcac
tgctggaagcccccctcggtccagcagcagaaacaggaaatggcttcccagctgcagtac
aacatcatggagcaaaacaaactgaacaaggaccgctacagaggtggtgacagcccgatg
ccagccaccatcccctacaaccagacccatgacagccacacgggaggctcctacaacagc
tccgacagaggcagcagtagcacctccgggagtcagggtcacaagaagggagtgcgcacc
cccaaactacccaaacagagcacaatgaattgggctgacctcctgccccctccccctgca
aacccaccccccagtcggagcacagaggagtactctctatcgatggaggaaaggtgggag
atgtctgcacagacacagagacacagacaacctgacagctgtgacccagacatgcagtgc
cccatgcccccctctcacatgtacctgcagcctgacgagctggaggaggaagaagagatg
gagaggggccccactcctcccatcagaggggccgcctcctccccggctgccgtatcttac
agtcaccagtccacagccactctcacaccctcgccgcaggaggaaatgcagccgatgctc
caggaagcaccggacagccatgaacgcaggcgccatgctgtgagccccccgccccctccg
cggcccctctccccttcacacacatatgggtacatcaccagcccgttggccttggacact
gacggcatggaggaggaggatgatatattagaagaagaggaggaggagggtgacgagaca
gacgcagaggtagccaagatgcactaccaccacaccatcccccacacacacccccaccac
ccccagatgcatccgcgaaggttgctgctacggggtctggagcagacgcctgcgtccagc
atgggcgacctggagagctcggtgaccggctccatgatcaacgggtgggggtcggcttcc
gaggaggataatgtctcttcaggaaggtccagcgccgtcagctcatcagatggatccttc
ttcactgatgctgactttgctcaagcggtcgcagcagcggcggagtattcaggcctgcgg
gtggccaaatatcccaacacacagggccacgaagtgggaggagcttcagcacgaaaatac
caaataaacccgtcgggccaccgtccgggcagcccggtgtccacggacagtaacatgagt
atggcagctgtacacaggaggcctcctaagaagcagaaacagcatcctgcagttcatcca
gtgaaccagcgacgtgaagtctataatgaagatctcccacctccgcccatcccacctcca
gcagtgcttaagtcgcctacgcacccctccaaggtagccctggaggggaggggagtcatt
tcccccaaagcaggtgagggccgagacaagagaggggcaacggggagctaccggcccaga
gacggctcggacaccagaaccagctcgtctgagcgcagagacgctcaggagagacaaaag
actgctcatggagggaaagggaataaacatgagggtagcatcgccaacaaggcacgccaa
cacgcaggttcagaggacattttgccctacagccgaccacagttccccacagtcaacagc
ccccgagaccccagctcctccagctccatgtcctccaggggctcagggggccggcggaga
ggagaaggaggccgcaggaaccctgcagacatgggcctcaacaccacgggggccttcaca
caaggagatgaagagctagagatggtagagagctga
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integrated database retrieval system
