Semicossyphus pulcher (California sheephead): 138596724
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Entry
138596724 CDS
T10596
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04136
Autophagy - other
spul04140
Autophagy - animal
spul04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138596724 (atg16l1)
04136 Autophagy - other
138596724 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138596724 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138596724 (atg16l1)
03029 Mitochondrial biogenesis [BR:
spul03029
]
138596724 (atg16l1)
Membrane trafficking [BR:
spul04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
138596724 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
138596724 (atg16l1)
Mitochondrial biogenesis [BR:
spul03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138596724 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_HPS5
PUMA_CC
KASH_CCD
Beta-prop_DCAF12
EXOC6_Sec15_N
HALZ
DUF4200
NET2A
DUF4407
Motif
Other DBs
NCBI-GeneID:
138596724
NCBI-ProteinID:
XP_069524139
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAERRVECTWKRHVSEQLKLRDRVQRQAFEELIHQYNRLLEKSELQAVLSERYQADKFDV
QRGHEASSGVESSRSDALQQEMAQMRIRHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEARMVEYQQQISSLEGDCRELRSCLQDLERANQTLKDEYDALQITFSALEEKLRKT
TEDNQELVSRWMAEKAQEANKLNAENEKDSRRRQAKLQKELADAAKEPLPVDPDDDIEVL
AEDGGKVGGETSPNRVLSRTPSKKISQPPPGGLLDSISNIFGRRRPAGSFSSSPESTEAP
SGVCAEVRVPSTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVAGRCEPKGA
LTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNA
RIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRSESI
VRELELLGRVTSLDLNHDRSELLTCSRDDLLKIIDLRTNAVRQTFSAQGFKCGADWTRVT
FSPDGSYVAGGSADGALYVWNVLTGKVDRTLDRNHNSAINAVSWSPSGAFVVSVEKGSRA
ILWSDM
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgggtggagtgcacgtggaagagacacgtctcagagcagctgaagctc
agagaccgagtgcagagacaggccttcgaggagctcatccaccagtataaccgtctgctg
gagaagtcagagcttcaggccgttctgtcggagagatatcaggccgacaagtttgatgtc
cagagaggacatgaggccagctcaggggtggagtcgagtcgcagcgacgccctgcagcag
gagatggctcagatgagaatcagacaccaggaggagctgacagagctgcacaagaaacga
ggagagctggctcagagcgtgatcgaactgaacaaccagattcaacagaaagacaaagag
atccagagcaacgaggccaggatggtggagtaccagcagcagatcagcagtctggaggga
gactgtcgggagctgaggagctgcctgcaggacctggagcgggcgaaccagacgctgaag
gacgagtatgacgcgctgcagatcaccttctccgctctggaggagaaactgaggaagacc
acggaggacaaccaggagctggtgtcccgctggatggctgagaaggctcaggaggccaac
aagctgaacgccgagaacgagaaggacagccgacgcagacaggccaagctgcagaaggag
ctggcagacgccgccaaagagccgctgcccgtcgacccggatgatgacatcgaggttctg
gctgaggatggagggaaggtgggcggagagacttcaccgaacagagtgctcagcaggact
cccagtaagaagatctcccagcctcctcccggtggtctgcttgactccatctccaacata
tttggcaggcgtcgacctgctggctcgttcagctcgtcccctgagagcacagaggctcct
tcaggtgtgtgtgccgaggtcagagtcccctcgacggcgctgcatgtgtttgaagctcat
gatggcgaggtgaacgctgtgaggttcagccccggctcccgtctcctagcaacaggaggg
atggaccgccgggtaaagctgtgggaggtggtggctggccgctgtgaacctaaaggagct
ctgacgggcagtaatgcaggaatcaccagcatcgagtttgacagcgctggctcgtacctg
ctcgctgcctctaacgactttgcgagtcggatctggactgtggacgactacaggctgagg
cacaccctgacgggtcacagtgggaaggtgctgtcagctcgcttcctattggacaacgct
cggatcgtctctgggagctacgaccgaactcttaaactgtgggacctccgcagcaaagtc
tgtatgaagacggtgtttgcaggctccagctgtaacgacattgtgtgtacggagcagtgt
gtgatgagcggacactttgataagaaggttcgattctgggacatcaggtcagagagtatc
gtccgggagctggagctgcttggcagagtcacgtcgttggacctgaaccacgaccgcagc
gagctgctcacctgctccagagacgacctactaaagatcatcgacctgcgcaccaacgct
gtcagacagaccttcagtgcacagggcttcaagtgtggagcagactggaccagagtgacc
ttcagtcctgacggcagctacgtggccggaggatcagctgatggagctctctacgtttgg
aacgtcttgacggggaaagtggaccgaactctggaccgaaaccacaactctgccatcaac
gcggtgtcctggtccccctctggtgcgttcgtggtcagtgtggaaaaaggcagcagggcc
atcctgtggtctgacatgtga
DBGET
integrated database retrieval system
