Semicossyphus pulcher (California sheephead): 138596863
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Entry
138596863 CDS
T10596
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138596863 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138596863 (prpf8)
Spliceosome [BR:
spul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138596863 (prpf8)
Complex C
U5 SnRNP specific factors
138596863 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
138596863
NCBI-ProteinID:
XP_069524393
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPPGMPPGVPPPAPVPDYMSEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDSSCVEWFYEHQPLKDTTKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccttcccctacagaggggtccctcctgggatgccaccaggtgttccccct
cctgcgccagtcccagactacatgtcagaagaaaaacttcaagagaaagcaagaaaatgg
cagcacttgcaggcaaagcgctactcggagaagagaaagtttggctttgtggatgctcag
aaggaagacatgccacctgagcatgttcgcaagatcatcagggaccatggagacatgacc
aatagaaagtttcgccatgacaagagggtttacctcggtgccctgaagtacatgccccat
gctgtgctgaagctgctggaaaacatgcctatgccctgggaacagatcagagatgtgccc
gtcctctaccacatcactggagctatttcctttgttaatgaaatcccctgggtcatagag
ccagtctacatcgctcagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgat
cgtaggcacttcaagaggatgcgatttccgccatttgatgatgaggagccgccgctggac
tacgctgacaacatccttgatgtggaacctcttgaagccatccagatggagctggaccct
gaggaggactcttcttgtgtggagtggttctatgagcaccagcccctcaaagacaccacc
aagtttgtgaacggcaccacctaccgtcgctggcagttcactctgcctatgatgtcaaca
ctttaccgcctggccaatcagctgttgacggacctggtggatttcaactacttttatctg
ttcgacctcaaggccttcttcacttccaaggctttaaatatggccatccccgggggaccg
aagtttgagccactggtcagggacatcaacctccaggatgaagactggaatgagttcaac
gacatcaacaagatcatcattcggcagcctatcaggacagagtacaaaatcgccttcccc
tacctgtacaacaacttgccgcaccatgtccacctcacctggtatcacacacctaacgtg
gtgtttatcaagacagaggatccagatctcccggcgttctacttcgacccgctgatcaac
cccatttcacacagacattctgtcaagagtcaggagcctctgcctgatgatgatgaggag
tttgagcttcccgagtatgttgagcccttcctcaaggagaccccactctacactgacaac
acagccaatggcatcgctctgctgtgggcacccagacccttcaacctgcgatctggccgc
acaaggcgtgccatcgatatccccctgatcaagaactggtatcgtgagcactgcccagca
ggacagccagtgaaagtgcgcgtgtcgtaccagaaactgctcaagtactatgtgctcaac
gctctcaaacacagaccacccaaggcccagaagaagaggtatctgttccgctccttcaag
gccaccaaattcttccagtccaccaagctggactgggtggaggtgggtctgcaggtttgc
cgacaaggctacaacatgctcaatctgctcatccatcgtaagaacctcaactacctgcat
ctggactacaactttaatctgaagcctgtcaagacactgaccacaaaggagcgaaagaag
tcccgatttggcaatgccttccatctgtgcagagaggtgctgcgtctcagcaagctggtg
gtggacagccacgttcagtacagactgggaaatgtcgacgccttccagttggctgacggg
ctgcagtacatcttcgctcatgtgggtcagctgaccggcatgtaccgatacaagtacaag
ctgatgagacaaatccggatgtgcaaagatctgaagcatctcatctactacaggttcaac
actggtcctgtgggcaaaggtccaggttgtggcttctgggctcccggctggagagtgtgg
ctgttcttcatgaggggaatcacacctctgctggagagatggctcgggaatctgctggcc
aggcagtttgaaggacgtcattcaaagggcgtagccaagacggtgaccaaacagcgtgtg
gagtctcactttgacctggagctgcgtgctgctgtgatgcacgacatcttggacatgatg
ccagagggcatcaaacagaacaaggccaggaccattctgcagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgccaggtctgcccacgcccatcgagaac
atgatcctgcgctacgtgaaggctaaagctgactggtggaccaacactgcccactacaac
cgtgagcgtatccgccgtggagccactgtggacaagaccgtgtgcaagaagaacctgggg
agactgacccgtctgtacctgaaggctgagcaggagagacagcacaactacctgaaggat
ggtccctacatcacagcagaggaggcggtagccatttacaccaccactgttcactggctg
gagagtcggcgcttctcccccatcccgttccctcctctgtcctacaaacacgacaccaag
ctgctcatcctggccttggagaggctcaaggaggcgtacagcgtgaagtctcgtctgaac
cagagtcagagagaggagctggggctgatcgagcaggcgtacgacaatcctcacgaggcc
ttgtccaggatcaaacgtcacctgctcacacagagagccttcaaagaggtgggaatcgag
ttcatggacttgtacagtcacctggtacccgtgtatgatgtggagcccctggagaagatc
acggacgcctaccttgaccagtacctatggtacgaggcagacaagagacgcctcttccca
ccctggatcaaacctgccgacactgaaccaccacccctgctggtgtacaagtggtgccaa
ggcatcaacaacctgcaggacgtgtgggagaccgcagagggggagtgtaacgtgatgctg
gagtcccgctatgagaagatgtacgagaagatcgatttgacgctgctcaacaggctgctg
cgtctcattgttgaccacaacatcgctgattacatgacagccaagaacaacgtggtcatc
aactacaaagatatgaaccacaccaactcctatggcatcatcagggggctccagtttgct
tccttcattgtgcagtactacggcctggtgatggacctgctggtgctcggcctgcaccgt
gccagcgagatggccggaccacctcagatgcccaacgacttcctgagtttccaagacacg
gccacggagagcgcccacccgatccgactgtactgccgctacatcgaccgcatccacatc
ttcttcaggttctctgcggacgaggccagagatctgattcagaggtatctgacggagcat
ccagaccccaacaatgagaacatagtgggctataacaacaagaagtgctggccacgtgac
gcccgcatgagactgatgaagcacgatgtcaaccttggtcgtgctgtgttctgggacatc
aagaaccgcctgcccaggtcagtgaccacagttcagtgggagaacagctttgtctcagtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcttg
cctaagtgccgcaccagctatgaggagttcactcacaaggacggtgtgtggaacctgcag
aacgaggtgaccaaagagaggacagcgcagtgtttcctgcgtgtggacgatgaatcgatg
cagcgcttccacaacagagtgcgtcagatcctgatggcctctggatccaccacgttcacc
aagattgtgaacaagtggaacacggctctcatcggtctgatgacgtacttccgtgaggcc
gtggtgaacactcaggagctcctggacctgctggtcaagtgcgagaacaagatccagacc
cgtatcaagatcggcctgaactccaaaatgcccagtcgattccctcctgtggtcttctac
acgcccaaagagctgggtggtcttggcatgctgtcgatgggccacgtgctcatcccacag
tcagacctgcggtggtccaagcagacagatgtgggtatcactcacttcaggtctggaatg
agccatgaagaggaccagctgattcctaacctgtatcggtacattcagccgtgggagagc
gagttcatcgactcgcagagagtttgggccgagtacgctctcaaaagacaggaggccatc
gcccagaacagacgtctgaccctggaagatttggaggactcgtgggacagaggaatcccc
cgtatcaacacacttttccagaaggacagacacacgctggcctacgacaaaggctggaga
gtcaggacagatttcaaacagtaccaggtgctgaagcagaatccgttctggtggacccac
cagaggcacgatggcaaactgtggaacctgaacaactaccgcacagacatgatccaggcc
ctgggcggtgtggaaggcatcctggagcacacgctcttcaaaggcacttacttccccacc
tgggagggtctcttctgggaaaaggccagtggttttgaggagtccatgaaatggaagaag
ttgaccaatgcccagaggtccggtctgaaccagatccccaaccgtcgcttcacactttgg
tggtcacccactatcaacagagcaaacgtgtacgtaggtttccaggtacaacttgacctg
actggaatcttcatgcacggcaagatccccacactgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcatcgtcatggatctctgtcaggtgttt
gatcaggagctggacgctctggagattgagacggtgcagaaggagaccatccaccccagg
aagtcgtacaagatgaactcctcctgtgccgacatcctcctcttcgcttcatacaagtgg
aacgtctctcgaccgtctctcctcgctgactcaaaggacgtgatggacagcacaaccaca
cagaagtactggatcgacattcagctgcgttggggcgactatgactcgcatgacatcgag
cgatacgccagagccaagttcctggactacaccacggacaacatgagtatctacccctcc
cccactggggtgctcattgctatcgacttggcttacaacctccacagtggctacggtaac
tggttccctggaagcaagcctctgatccagcaggccatggccaagatcatgaaggccaac
cccgccctgtacgtgctcagggagcgcatccgcaaaggtcttcagctgtactcctccgag
cccactgagccctacctgtcctcacagaactacggtgaactcttctccaaccagatcatc
tggtttgtagacgacaccaacgtgtaccgagtcaccatccacaagacctttgagggtaac
ttgaccacaaagcccatcaatggagctatcttcatcttcaaccccaggaccggtcagctc
ttcctcaagatcattcacacgtctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgccctgattcgctccctccccgtggaagagcag
ccgaaacagatcatcgtaaccaggaagggcatgttggaccctctggaggtccacttgctc
gacttccccaacatcgtgatcaaaggctctgagctgcagctgcctttccaggcctgcctg
aaggtggagaagtttggagacctaatcctgaaggccacagagcctcagatggtgctgttc
aacctctacgacgactggctcaagaccatttcatcttacacagccttctcccgactcatc
ctgatccttcgagcgcttcacgtcaacaacgaccgagccaaggtgatcctgaaacctgac
aagacgaccatcactgagccacatcacatctggcccaccctcactgatgaggagtggatc
aaggtggaggtgcaactcaaagatctcattctggcagattatggcaaaaagaacaatgtg
aacgtggcttcactcacacagtctgagatccgtgacatcatcctcggtatggagatttcg
gctccgtcacagcagcgtcagcagattgctgagattgagaagcagaccaaagagcagtcg
cagctcacggccacacagaccagaactgtcaacaagcacggtgacgagatcatcacctcc
accacctccaactacgagacccagaccttctcctccaagaccgaatggagagtcagggcc
atatctgctgccaacctccatcttcgaacaaaccacatctacgtgtcgtctgatgacatc
aaagagacgggctacacctacatcctgcccaagaacgttctcaagaagtttatctgcatc
tcagatctgcgagcacagattgcaggctacctgtatggcaccagcccaccagacaacccc
caggtgaaggagatccgttgtatcgtcatggtgccgcagtggggaactcaccagactgtc
cacctgcccaaccagctgcctggtcatgagtaccttaaagaaatggagccccttggctgg
atccacactcagcccaacgagtccccccagctgtccccgcaggatgtcaccacccatgcc
aagatcatggctgacaacccctcttgggatggagaaaagactatcatcatcacttgcagt
ttcacccccggctcgtgcacgctcacagcctacaagctgacacccagcggatatgagtgg
ggtcgacagaacacagacaagggaaacaaccctaaaggctacctgccttcccactatgag
agagtgcagatgctgctctctgatcgcttcctgggcttcttcatggtgccaggccaggtg
tcctggaactacaacttcatgggtgtacgccatgaccccaacatgaagtatgacctgcag
ctggctaaccccaaggagttctaccatgaagtccacaggccctcgcacttcctaaacttc
gcctcactgcaggagggtgagatctataacgcggaccgtgaggacatgtatgcctga
DBGET
integrated database retrieval system
