Semicossyphus pulcher (California sheephead): 138596895
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Entry
138596895 CDS
T10596
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138596895 (ddx6)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138596895 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
138596895 (ddx6)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138596895 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138596895
NCBI-ProteinID:
XP_069524453
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTVRTENPVILGLSNQNGQLRGSVKPAGAPGGGGGGGGPQQQLNQMKGAINNGNSQPAP
TTNAVIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQAVVIVPTRELALQV
SQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVIIATPGRILDLIKKGVAKVNQV
QMIVLDEADKLLSQDFVVMMEEMLGFLAKQRQILLYSATFPLSVQKFMNAHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSESGEE
VKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtcaggacagagaacccagtgattttgggcttgtcgaaccagaatggacag
ctgagaggctctgtgaagcctgcaggagcaccaggtggaggtggtggaggaggaggccct
caacagcagcttaaccagatgaaaggtgcaatcaacaatggtaactcccagccggcccct
acaactaacgctgtcatcaagcctggagatgactggaagaaaaatttgaaattgccccca
aaagacatgaggatgaaaacttcggatgtgactgcaactaaaggcaatgagtttgaagat
tattgcctaaagagggagctactcatgggaatctttgagatgggctgggaaaagccatct
ccaatccaggaggaaagtattcccattgcactgtcagggagggatatcctggccagagcc
aagaacggcacgggaaagagtggagcctacctcattcccttacttgaacgcatcgacctg
aagaaggactgcatacaagctgtggtcatagtgcccaccagagaactggctctgcaagta
agccaaatatgtatccaggtcagcaaacacatgggtggagtgaaggtgatggcaaccaca
ggtggaaccaacctccgtgatgacataatgagactcgacgagacagtacatgtgatcatt
gccactccggggaggattctggacctcatcaagaaaggagtggccaaagtcaatcaagtg
cagatgattgttctggatgaagctgacaaactcctgtctcaggacttcgtggtgatgatg
gaggagatgctgggcttcctggccaaacagaggcagattctgctttattctgcaaccttt
cctctcagcgtgcagaagtttatgaatgcacacttgcagaaaccatatgagatcaacctg
atggaggagctgacactgaagggtgtgactcagtattacgcttatgtaactgaaaggcaa
aaggtccattgccttaacaccttgttctccaggctccagatcaaccagtcaattattttc
tgcaactcctctcaaagagtagagctcctcgccaagaagatctcccagctgggttattca
tgtttctacattcatgccaagatgagacaggagcatcgcaaccgtgtgttccacgacttc
agaaacggcctctgcaggaatcttgtctgcactgacctcttcacaagaggaattgacatt
caagctgtgaatgttgtgatcaattttgactttccaaagctgggagaaacataccttcat
cgcattggtcgatctggccgctttggacacttgggtcttgccatcaacctcatcacctat
gacgatcgcttcaacctgaaagggattgaggagcagcttggaactgagatcaagcccatc
cctggcatcattgacaagagtctctatgtggcagagtaccacagtgagagtggtgaagag
gtcaagccatga
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integrated database retrieval system
