Semicossyphus pulcher (California sheephead): 138596954
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Entry
138596954 CDS
T10596
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138596954 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138596954 (dhx36)
03012 Translation factors [BR:
spul03012
]
138596954 (dhx36)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138596954 (dhx36)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138596954 (dhx36)
Translation factors [BR:
spul03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138596954 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
DUF7428
NB-ARC
Motif
Other DBs
NCBI-GeneID:
138596954
NCBI-ProteinID:
XP_069524541
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGYRDGSRERWDRGGGGGSRGNSSDFDQDRGGGGGGGGGGQRD
RPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDHMGPER
AGRDERAGRDARASTSGNWQTSASGGGHCFFDGDEPEESKIKIEIKSEEEEEDVTPGQKK
ATQKSQRYFSQAVTKDEPPDTWDEDEQQQQQEQQEDEKEKLRRQDKDLEFLFQDVIRDNS
LDGSLQRDLQNKKSDPKYKEMLKFREKLPSYGKKEELVELINSNRVLVVSGETGCGKTTQ
VTQFILDDHINRGVGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSR
LPRRQGSVLYCTTGIILQWLRSDPLLSSVSHLVLDEIHERNLQSDVLLVIVKDLLSARDD
LKVILMSATLNAEKFSRYFDNCPMIHIPGLTFPVEEFLLEDILEMTRYRPQNKDRRPAWK
RGFWQGRNSRPEKEEKEAEYKESWPCYARTLQGRYSDNTIEALENLDNDEKIDLELILAL
IRHIVINDEEGAILVFLPGWDNISSLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFK
RPPAGVRKIVIATNIAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQ
RKGRAGRVCPGKCYHLYNSLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIARFLEKA
LDPPTEKAVNLAIKNLTDLNALDRSENLTALGVHLARLPVEPHIGKLILFGALLGCLDPV
LTIAASLSFKDPFFIPLGKEKMADMRRRVLSRNSKSDHLTIVNAFQGWEEAKRRGARYER
EYCWDNFLSANTLQMLQNMKGQFAEHLVNAGFVSSKDPKDPKSNVNSDNEKLIKAVIVAG
LYPKVAMIRPSHSKKRPGAKVYTQADGKVCIHPKSVNAEESEFNYTWLIYHLKMRTSSIF
LYDCTEVSPFSLLFFGGDITIQKDEGQETVAVDQWIVFRSPARIAHLVKSLKRELDSLLE
EKIRSPAPVDWENRQSKDCAVITAIIDLITTQEKPTGSTKGHGRPWASAPRGQHSYFNDD
DDDDDD
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggcggtggaggtgggagaagaggcagaagaggaggtcgaggttac
agagatggaagtagagaaagatgggacagaggaggtggaggtggctcgagaggaaacagt
tccgactttgaccaggaccgaggaggaggaggaggaggaggaggaggtggacaacgggac
cgtcctcctccacatctgaagggccgtgagattggtctgtggtacgcaagatacggagcc
gtgaggaggaaacaggctgaccggagatcgagggcagtggtccagatggatgaggccaga
gagcagcacattaccaagctgcttaactctgtccagaatgatcacatgggtcctgagaga
gctggcagagatgagagagccggcagagatgcaagagcctcgacgtctggcaactggcag
acttctgccagtggaggtggtcattgtttctttgatggggatgaacctgaagagagtaaa
ataaagattgagattaaatctgaggaagaggaggaagacgttactccaggccagaagaaa
gcaactcaaaaatcacaacgttacttctctcaggcagtcactaaagatgagcctccagat
acctgggatgaagacgagcagcagcagcagcaggagcagcaagaggatgagaaagaaaaa
ctgaggaggcaagacaaggatctggagttcttatttcaggatgttatcagagacaattca
ctagacggctcccttcagagagatctgcagaacaagaaatcagatccaaagtacaaagaa
atgttgaaattccgggagaaacttccatcttatgggaaaaaagaggagcttgtggagctg
atcaactccaaccgcgtcctggtggtgagtggagaaacagggtgtggaaagacaactcag
gtcacccagttcatccttgatgaccacataaacagaggcgtgggctcaatgtgccgcgtg
gtctgcacgcagcctcgtcgtatcagtgccatctcggtcgcagagcgtgtagcagcagaa
agggcagaaagtgtagggaatggaaattcttgcggataccaaatccgcctgcagagccgg
ttaccacggagacaaggttcggtcctgtattgtacaacaggcattattcttcagtggctt
cgctcagacccattgttatccagcgtcagccacctggtgttggacgagattcacgagaga
aacctgcaatccgacgttttgcttgttattgtgaaggacctacttagcgccagagacgac
ctcaaagtcatcctcatgagtgccactctcaatgcagagaagttttcaagatattttgac
aactgtccgatgatccacatccccggtttgacgttcccagtggaggagttcctacttgag
gacattttggagatgaccaggtatcgcccccagaataaggaccgccgtcccgcatggaag
agaggcttttggcagggacgcaactccagacctgagaaggaggagaaggaggctgaatac
aaagagagctggccttgttatgcccgcacactgcagggcagatactctgacaacaccatt
gaggcgctggaaaatttggacaatgatgagaagattgacctggagctcatcctggcgctg
attcgccatattgtgatcaatgatgaggaaggagcaatcctggtcttcctgcctggctgg
gacaacatcagcagcctcaatgacctgctcatggctcagcagatgttccgatcagaccgg
ttcgttatcatccctctgcactccctcatgccgaccgttaatcagacgcaggtgttcaaa
agacctcctgctggagttagaaagattgtgattgccactaatatagctgagaccagcatc
accatcgatgacgtcgtctatgtgatagatggtggcaagattaaggagaccaactttgac
accaacaacaacatcagcaccatgacggcagagtgggttagcctggcaaatgccaagcag
aggaagggacgagccggcagagtgtgtccagggaagtgctatcatctgtacaacagtctc
cgggcgagcctgctggatgcctatcaattacctgaaattatgaggacgccgctggaggag
ctctgcctgcagatcaagatattgaagctcgggtctatagctcgattcctggagaaagcc
ctggaccctcccactgagaaggctgtcaacctggccatcaagaacctcacagacctgaac
gccctggaccgctccgagaatctgaccgcgctgggcgtccacctggctcgtctacctgtg
gagcctcacatcggcaaactgatcctgttcggagctctgctgggctgcctcgaccccgtg
ctcaccatcgctgcttcactcagcttcaaagaccctttcttcatacccctggggaaagag
aagatggcagacatgaggagaagagtcttgtccaggaactccaagagtgaccacctcact
atcgtcaatgccttccagggctgggaggaagccaaacggcgcggtgccagatatgagcgg
gagtactgctgggacaacttcctgtctgccaacacgctgcagatgttgcagaacatgaag
ggtcagtttgctgagcatctagtgaatgcaggcttcgtcagcagcaaggaccccaaagac
cccaaatctaacgtcaactcagataatgaaaagttaatcaaggcggtgattgtagccggt
ctgtacccgaaggtggccatgatcagaccatcacacagcaagaagaggcccggggctaag
gtgtacacccaggccgatggaaaggtgtgcatccaccccaaatcagtcaacgctgaagag
tctgaattcaactacacgtggctcatctaccacctgaagatgaggacgagcagcatcttc
ctgtacgactgcactgaggtgtccccgttctccctgctgttcttcggaggcgacatcacg
atccagaaagacgagggccaggagacggtcgccgtggaccagtggatcgtcttcaggtcg
cccgcgcgcatcgcccacctcgtcaagagtttaaagagagagctggattctctgcttgag
gagaagatccgcagccctgctcctgtggactgggagaaccgtcagtccaaagactgtgct
gtcatcacagccatcatagacctcatcaccacgcaggagaagccgacaggcagcaccaaa
gggcacggccggccgtgggcgtctgcgccgagaggacaacactcttacttcaatgacgat
gacgacgacgacgatgattag
DBGET
integrated database retrieval system
