Semicossyphus pulcher (California sheephead): 138597074
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Entry
138597074 CDS
T10596
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03030
DNA replication
spul03420
Nucleotide excision repair
spul03430
Mismatch repair
spul03440
Homologous recombination
spul03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
spul03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138597074 (rpa1)
DNA replication proteins [BR:
spul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138597074 (rpa1)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138597074 (rpa1)
MMR (mismatch excision repair)
138597074 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
138597074 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138597074
NCBI-ProteinID:
XP_069524704
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Position
Unknown
AA seq
605 aa
AA seq
DB search
MTKLSEGAIEALINGTGENDLVLQLVNIRKIEGGSGHTRWRVMMSDGRHTLSSFMLNTQL
NHMAEENYLVQNCVCLLKKHVTNILKDGRRVVIILEIEVLKPAEEVGGRIGDPTPLTDVH
VKAPQSAANPEPRPPLQQQNRNEVPPTVQRGFNKDFGKKAPSAMPSTPGGGSKIVPIASL
NPYQSKWTIRARVTNKSSIRTWSNSRGDGKLFSMEVVDESGEIRLTGFNQEVDKFFGLIE
VGKVYYVSKCSLKIANKQYTSVKNDYEMTLNGESTIIPCEDSSDVPMVQCDFVSIADLES
REKDAIIDVIGVCKNVDEVTRLTTKSNKEVSKRTVDLMDMSGKVVTVTLWGETAETFDGS
GQPILAIKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHAVEGQSVTEAK
GGGGGGGNTNWKTLSDVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVV
DQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLK
DSNEAAFDEVFQQANFNTFVFRSRVKLETYNDESRIKASVMEVKPVDHKDYSKRLIMNIR
KVASK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctctccgagggtgccattgaggctctcataaacggcaccggtgaaaacgac
ctggtgcttcagttggtgaacattcgcaagattgagggaggaagcggtcatacccgctgg
agggtgatgatgagtgatgggcgacacactctgtcctccttcatgctcaacacccagctt
aaccacatggctgaggagaattacctggtccagaactgcgtctgccttctaaagaagcat
gtgaccaacatactgaaggatggacgacgggtggtgatcattttggaaattgaggtcctc
aagcctgccgaagaagttggaggaagaataggtgaccctactcctctcactgatgttcat
gtgaaagccccacagtcggcggcaaacccagaaccccgccctccactgcagcaacaaaac
cgtaatgaagttcctccgactgtgcagcgaggtttcaataaagactttgggaagaaggcc
ccatctgctatgcccagtactccagggggcggctccaaaattgtgcccatcgccagcctc
aacccctaccagtccaagtggaccatccgcgcccgtgtaaccaacaagagcagcatccgc
acatggagcaactcccgcggagatggcaaactgttctccatggaggttgttgatgagagt
ggagagatacgactgaccggcttcaaccaggaagttgataagttcttcggcctcatcgag
gttggcaaggtctactacgtctccaagtgctccctgaagatcgccaacaagcagtacaca
tccgtgaagaacgactacgagatgaccctcaacggcgagtccaccatcatcccctgtgaa
gacagctccgatgttcccatggtgcagtgtgacttcgtctctatcgctgacctggagagc
agagagaaagatgctatcattgatgtgattggagtttgtaagaatgtggacgaagtgacc
cgcctcaccaccaagtccaacaaagaagtttctaagagaacagtggatctgatggacatg
tcggggaaggtggtgactgtcacgctgtggggagaaacggctgagacgtttgatggctct
ggacagcccattttagccattaagggggcgaagctttcagacttcggaggccgctccctc
tccgcatccttcagcagcaccctgatgatcaacccagacatccctgaggcatataagctc
cgaggctggtacgacaaggagggtcatgctgtggagggacagtctgtgacggaggctaaa
ggtggcggcggcggaggaggaaacaccaactggaagactctgtctgacgttaagactgag
cacctgggacacggagacaaggccgactactacacgtgcattgctaccatagtgtacctg
cgcaaggagaactgcctttaccaggcctgtcccagccaagactgcaacaagaaagtggta
gatcaacagaatggcatgttccgctgtgaaaagtgcgacaaagagttccccaacttcaag
taccgcctcatcctttctgccaacatcgcagattatggggacaaccagtgggtgacttgc
ttccaggagagtgcagaggccatcctcggccaaaacgcagcttacctggggcagctcaag
gactcgaacgaagctgcctttgacgaggtcttccagcaagccaacttcaacacattcgtc
ttccgcagcagggtgaagctggaaacgtacaacgatgaatccaggatcaaagcttcagtg
atggaggtgaagcccgtcgaccacaaggactacagcaagaggctgatcatgaacataagg
aaagtggcttctaagtag
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integrated database retrieval system
