Semicossyphus pulcher (California sheephead): 138597285
Help
Entry
138597285 CDS
T10596
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138597285 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
ADIP
Bcr-Abl_Oligo
HTH_32
Fib_alpha
STX6_10_61_N
HAUS-augmin3
MG280
Motif
Other DBs
NCBI-GeneID:
138597285
NCBI-ProteinID:
XP_069524968
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MAAFSTERWLNDLPNHTIFKKIREKLDLEPHSNERGVAKNLTFCLGGDFFVWDDIDRVFY
TTNLRQLNSDESRSSGNYQSLLCINPPLFEVCQVLLSPTQHHVALIGQRGVSVLELPQRW
GKRSEFEGGRSEINCKTIPVAERFFTSSPSVHLRQAVWYPSETDEPHLVLLTSDNTIRFY
SLKSPQTPAKVLPLSQSEDDSSVHPPARSYAASLGEIAVAFDFGQITSPPRQLAALCSKE
QLVYPLYILYENGETYLSYTSQTNGVSLTKPVGPLPMYPAAEDNYGYDACAILCLPCVPS
ILVIATETGTLYHCVVLESEDEEEPGAVEKWIRGTEAVPALYVFECVELELTLKLATAEE
EEPQEFDFTCPIRLHRDPLCQHRYHCTHEAGVHGVGLIWVNKLQKFLQSGEEDKDGLQEL
AAEKRCIVEHILCTRPLLTSQSAPVRGFLIVSDLSLGATMICITNSYECILLPLLSSIRP
PSPPLLCSHPGPGSGSSPLRGLADNSFEQHIRNILARSSTNPLVLKAGDKNTSSPPPPEC
LQLLSRATQVFREEYILKQDMAREEMQRRVKLLTGQKNKQLDEMTLCREDRMSLREAAER
LADKYEDAKYRQETIMNRVKKVLGSLQNQLPILSNSEKDMRKELQTISDQLKHLDNSIKQ
VNMKMEYQKTQVDKDAPAARTTVSLNAHQKKVVQDVLREQGQQIGDMMKQIKDIKNHFSF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattcagcacggaacggtggctgaatgacttaccaaaccataccattttcaaa
aaaatacgagagaagttggatttggagccccactcaaatgaaagaggggtcgctaaaaac
ctcacattttgtttgggtggggactttttcgtgtgggacgacatagaccgcgtgttttac
acgactaacttgcgacagttaaactcggatgagagtcgcagtagcgggaactatcagtcc
ttgctgtgcatcaaccctcctctttttgaagtatgccaggtgttgctaagtccaacgcag
caccatgtcgcgctcatcgggcagcggggcgtctcggtgctggagcttcctcaacggtgg
ggcaagagatccgagttcgagggcggaaggagcgaaatcaactgcaaaactatcccagtg
gcggagcgtttcttcaccagctcaccgtccgttcatctgcggcaggcggtttggtacccc
agcgagaccgacgagccccacctggtgctgctcacatcagacaacaccatcaggttttac
agcttgaagtcgccccagacgccggccaaagtcttgccactgtcgcagtcggaagatgac
agcagcgtccatcctcctgcccgctcctatgcagcgtccctgggtgagatagcagtggcg
tttgactttgggcaaattacgtccccccctcggcagctagcagcactgtgctccaaagaa
cagctagtctaccccttgtacatcctctacgaaaatggagagacctacctgagctacacc
agccagacaaacggggtgagtctaactaaacccgtgggacctctcccgatgtatcctgca
gcagaggataactatggttatgatgcttgtgccattctatgcctgccctgtgttcccagt
atcctggtcatcgccacagaaacaggcacgctgtatcactgtgtggtgctggagtctgaa
gatgaggaggagccaggggcagtggagaagtggatcagaggcacagaggcagtgcctgct
ctctatgtatttgagtgtgttgagctagagctcaccctcaaattagcaacagcagaggaa
gaggaaccccaagagtttgatttcacctgcccaatcagactgcacagagaccccctgtgc
cagcacaggtatcattgtacccatgaagcaggagtgcatggtgtggggctaatctgggtc
aacaagctgcagaaattcctccagtcaggtgaggaggataaggacggtctccaggagctg
gctgctgagaagcgctgtattgtggagcacattctttgtaccagacccctcctaaccagt
cagtcagctccagtccgtggctttttgattgtgtctgacctttccttgggagccaccatg
atctgcatcaccaacagctacgagtgcatcctgttgcccctgctgagctccattcgccct
ccctcccctcccctgctttgttcccatccaggtccaggctctggtagttcccctctgcgt
ggcctggctgacaactcctttgagcagcacatccgcaacatcctggcacgtagctccacc
aatcctcttgtcctaaaggctggagacaagaacacatcatcaccaccacctccagagtgt
ctgcagctcctcagcagagccacgcaggtcttccgtgaagagtacattctcaagcaggac
atggcccgtgaagagatgcagagaagggttaaacttcttacaggccagaagaacaagcag
ctagacgagatgacactgtgcagggaggacaggatgagtctgagagaggcagcagagagg
ttggctgacaagtatgaagacgcaaagtatcgtcaagaaaccattatgaacagggttaaa
aaagtgctgggcagcctgcaaaaccaactacccatactgtcaaacagtgaaaaggatatg
aggaaggagctgcagaccattagtgatcaactgaaacacctggacaactcaatcaaacag
gtgaacatgaagatggagtaccagaagacacaagtggacaaggatgcgcctgcagccagg
acaaccgtctcacttaatgcccaccagaagaaggttgttcaggatgtcctcagagaacaa
ggacagcaaattggtgacatgatgaaacagatcaaagacatcaaaaaccacttcagtttc
taa
DBGET
integrated database retrieval system
