Semicossyphus pulcher (California sheephead): 138597538
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Entry
138597538 CDS
T10596
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138597538 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138597538 (nup98)
03036 Chromosome and associated proteins [BR:
spul03036
]
138597538 (nup98)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138597538 (nup98)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138597538 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
138597538
NCBI-ProteinID:
XP_069525255
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQQNAAFGAAGGFGTSAFGATSNAGGLFGPTQNKPGG
LFGSSTFSQPATSSTSTSFGFGAPSGTTTNLFGSTATGTTGGLFSQPNNAFGANKPTSFG
KVSLTSCPPGFGTSTSSGGLFGSTNTTSNPFGGTASLFGGSGFSATQQPGTTVKFNPPTG
SDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPANPMAAGTGSLFGP
TTAASSAATGLFGSSAPNSSFSFGGNKSTFGATPAGGFGTTAGGLFSQPAQQPAGSLFKP
FQATTTQSTGFSFGNTNTMGQPNTSSMGLFGNTAPSQSGGLFGAAQTSTATGFGAGTGLF
GPTNTGFGNVGTQPSLFGSKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTSTFGF
AANPAAGSLFGNKPATGGLGTGLGTSFGTAVGTGQPSLFGNNQNKLGTTLGAIGTFGGTG
FNTGAGTLGFGAPQQPVALSDPSAAGAQQAMLQQQLSVLAYSPYGDSPLFRNQLSDPKKK
EERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKTQLFDGLDDDEPSLTNG
AFIPRKSIKKLVLKNLNSSQYNSPINKETDDLASPSEYPQNGHSHMEEEEELREVPGPST
QADDDPEVTQFYVNPIAKPIPQGRTQTSLQDTISDLNMHKASRNGLELSSEDVSASLGEE
SLQEEREEEQQESQQSPHPAGIVLNRVGYYTIPSMEDLAEMVDENGECMVENFTVGRKGY
GSIFFPGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKT
TCMQIRSPERLTDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVTHFSKYGLQDSDEED
DVPLKTDPKKLKTMASLPPSKLQQQLPPSQQQVAPQAQSTVVLDLPGGVAELDSDMADIT
QSFPTESMLGGEEDSELLVGDMDTTSGKLAGLIPTEHDGVSASGHIASTLGINPHTLQIM
KASLFAEDEEESDMFQDHRAMKVSTDVSSPRIVLPGSQSRPSVGGLLQARFTSGLLSQVS
DSPRTPLLPPSLSRGSPAAVEPPRPLHWAGAGPSSFLLPPRAPEPSVRTVGVRRLGGPVP
LKESVTQGKGCLLMDAGLFAGRSFRVGWGPGWTLAHCGHRLSSPSTKQLVQQELTSKTDF
SFLPKPARSKPLTESPYKVVLEQVVGLEPPAVKSSEEEEEEESQAVLQRPLEICLKHSTV
DTPDVSACPLIRPQPGVAALHEYAEWISELSDRQGDADPLLGYWSEVWTLCEALWGRLGP
ADQDPDVDTPSEYEQQLDRRRTFSAWLSRGASCRVEEEVALAGKGRHTDAIFSYLTGNRI
SEACRLAQKEGDHRLSLLLSQAMGSQYCRDLLALQLADWNRMQTDSYLPEERLRIFTLLA
GKPVWQSSDSVVNVCIELDWKRCVAVHLWFMLPPTASVADALAKYEAAFQGSFEGGKYAV
APLPPYMEAEQPDLEDEEKEESKRPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDY
RLSWHLWGVLQALHYSHLSASRQGLLHASYAAQLESAGLWHMAIFILLHIPDHTQRERAV
REMLTLHCSLQDTDESVQRERFLTERLLIPEQWIHEAKATRARRDADRHQEALHLYRAGF
WSQCHRLLIQHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVIKT
LQDIQQMENAGYELERLYTDVTSLCSRIELLPCSSARDRLAQSEMAKRVANILRVVLSLQ
QGDAASDSLSIPLAQLAPHITRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttgggactcccttcggtggagggacagggggctttggcacatcg
tcaacctttggacagcaaaacgcagcttttggggcagcaggaggctttgggacgtctgcg
tttggggccaccagcaacgctggaggactgtttggtcccacacagaataaacctggcggt
ctgttcgggtccagcacgttcagccagccggcaacttcctccaccagcactagcttcggt
tttggtgcaccgagtgggactaccaccaacctcttcggcagcaccgcgacgggcaccact
ggtggactcttctcacagccgaacaatgcattcggtgcaaacaaacccacatcttttgga
aaagtgtccctcacatcgtgtcctccaggctttgggacgagcaccagcagtggcgggctg
ttcggctccaccaacaccacctccaaccctttcggtggaaccgcctcactgtttggaggc
tctgggttctccgccacacagcagccaggaaccaccgtgaagtttaaccctccaacagga
agtgacacaatggtgaaggcaggtgtgaccacgagcatcaacaccaagcaccagtgcatc
accgccatgaaggagtacgagaacaaatccctggaggagttgaggctcgaggactaccaa
gcgggcagaaagggtccggccaacccgatggctgcagggacgggcagcctgttcggacca
accacggccgcatccagcgccgccactggcctgttcggctcctccgcccccaactccagc
ttctccttcgggggaaacaaaagcacctttggagcaacacctgcaggcggttttggtacg
acagcaggcggactgttcagtcagccggcacagcaaccagccggcagcctcttcaagccg
ttccaggccaccaccacacagagcaccggcttctcctttggtaacaccaacacgatgggg
cagcctaataccagcagcatgggtttgttcgggaacactgcaccgtctcagtcaggcggg
ttgttcggcgccgctcagacgagcaccgccaccggcttcggggcgggcaccgggctgttc
ggtccaaccaacactggatttggaaacgttggtactcagccgagtttatttggtagtaag
acagctgggtttggcaccaccaccaccagcgctccctccttcggcaccggcaccgggctg
tttggcaacaagccggcactcacgctggggacaggaaccaacacgtccaccttcggtttt
gctgcgaaccctgctgctgggagtctgttcgggaacaagccggccaccgggggactggga
actggactgggaaccagctttggaacagcagtgggcacaggacagccgtctctgtttggg
aacaaccagaacaaactgggcaccacgctgggagctataggaacctttggaggaacagga
ttcaacaccggagccggcaccctcggcttcggagctccgcagcagcccgtcgctctctca
gatccgagcgctgcgggggcccagcaggccatgcttcagcagcagctcagcgttctggcg
tactcgccgtacggagactcgccgctgttcagaaaccagctgtcagacccgaagaagaaa
gaggagcgtctgaaaccgaccaatccgacggcccagaaggctctgaccacgcccacccac
tacaagctgacgcctcgccctgcgaccagagtacgccccaaagccctgacgtcatcagga
gcctccaagacacagctcttcgatggcctggatgacgacgagccctcgctcaccaacgga
gccttcatacccaggaagagcatcaagaaacttgtgctgaagaacctgaacagcagtcag
tacaacagtccaatcaacaaagagactgacgacctcgcttcaccttcagagtatccacag
aacggacacagtcacatggaggaggaggaggagctgagggaggtgccgggccccagcacc
caagctgacgacgaccccgaggtcacacagttctacgtcaaccccatcgccaagccgatc
ccgcagggccgcacccagaccagcctgcaggacaccatcagcgacctcaacatgcacaaa
gcgtccaggaacggactggagctgagcagcgaggacgtgtcggcgtctcttggggaggag
tctctgcaagaggagagagaggaggagcagcaggagtcccaacagtctcctcaccctgca
ggcatcgttctgaaccgtgtgggttactacaccatcccctccatggaggatctggctgag
atggtggacgaaaacggagagtgtatggtggaaaacttcactgtcggcaggaaaggttac
ggctccatcttcttccccggcgaggtgaacgtgacgggactgaacctcgacgagattgtc
cacttcagacgcaaagaggtcatcgtgtacccggacgacaaaaacaagccgccagagggg
gaggggcttaacaggcgagcggaagtgactctcgatggtgtttggccaaacgacaagacg
acctgcatgcagatcaggagccccgagcgcctcacagacatgaactacgagggccggctg
gagaaagcatcacgcaaacagggagcaaggttcctggagtacagacctgagacgggatcc
tgggtgttcgaggtcacacatttctccaaatatggcctccaggactcggacgaggaggac
gacgtcccactcaaaactgaccccaagaagctgaagacgatggcgtcacttcctccttct
aagctgcagcagcaactgcctccttcccagcagcaggtggcgccacaggctcagtccact
gttgtccttgatctgccgggcggcgtggctgagttggacagtgacatggccgacatcacc
cagagcttcccgacagagagcatgctgggaggagaggaggacagcgagctgcttgtgggg
gacatggacacaaccagcgggaagctcgcaggtttgatccccacagagcacgacggcgtc
tctgcgtccggccacatcgcgtccacactggggatcaacccacacaccttacagatcatg
aaggcgtctctgtttgctgaggatgaggaggagagcgacatgtttcaggatcacagagcg
atgaaggtctccactgacgtctcttctcctcgcatcgtcctgccgggatctcagagccga
ccctccgtgggcggtctccttcaggctcgtttcacctccggcctcctctctcaggtgtcc
gactctcctcgcactcctcttcttcctccctctctgtcccgggggtctccagcggcggtc
gaaccaccccggcccttacattgggcgggggcaggcccctcgtccttcctgctgcccccc
cgggccccggagccctcggtcaggactgttggcgtccggcggctgggcggccccgtcccc
ctcaaagagtcggtcactcaggggaagggctgtctgttgatggacgcggggctgtttgcc
ggtcgttccttccgggtgggctggggtcccggctggacgctcgcacactgcggccacagg
ctgagctcaccgtcgaccaaacagctcgtccagcaagaactgacgagcaaaaccgacttc
agcttcctgccgaaaccagccaggagcaaaccgttgacagaaagcccctacaaggtggtg
ctggagcaggtggtgggtctggagcctccagcagtgaagagcagtgaggaggaggaggag
gaggagagccaggcggttctgcagcgccccctggagatctgtctgaagcacagcaccgta
gacacaccagatgtctccgcctgcccactgatccgaccacagcctggcgtggcggcgctg
catgagtacgctgagtggatcagcgagctgagcgacaggcagggagacgcagaccccctc
ctggggtactggtctgaggtctggaccctgtgtgaggccttgtggggccggttgggtcct
gcagatcaggatccagatgttgacactcccagcgagtacgagcagcagctggacaggagg
cgcaccttctcggcatggctctcccgcggagcctcctgcagggtggaggaggaggtggcg
ctggcggggaagggtcgccacacggacgccatcttcagctacctgacgggaaaccgcatc
agcgaggcatgtcgactcgctcagaaggaaggtgaccaccgtctgtccctgctgctgtct
caggctatgggctctcagtactgccgggacctgctggccctgcagctcgccgactggaac
cgcatgcagaccgacagctacctgcccgaggagcgccttcgcatcttcacgctgctcgcc
gggaaacctgtgtggcagtcgtcggactctgtggtgaacgtgtgcatcgagctggactgg
aagcgctgcgtggccgtccacctctggttcatgctgcctccgacggcctccgttgcagac
gctctcgctaagtacgaagctgccttccagggctcctttgagggggggaagtacgccgtc
gcgcccctgcctccgtacatggaggcagagcagccagacctggaggatgaggagaaggag
gagtctaaacgaccgctgcacgacctctgcttccacctgctcaaactgtacagcgaccga
cactacagcctgcagcagctgctggaccccctgaccgtcacctgggagcgtctggactac
cgtctgagctggcacctgtggggcgtcctgcaggcgctgcactacagccacctgagtgcc
tcgcggcagggactcctccacgccagctacgctgctcagctggagagcgccggcctgtgg
cacatggccatcttcatcctgctgcacatccccgaccacactcagcgggagcgagcagtg
cgggagatgctgaccctccactgctccctgcaggacacggacgagtcggtccagagggag
cgcttcctgaccgagaggctgctgatcccggagcagtggattcacgaggccaaggccacc
cgagcccgccgcgacgccgacagacaccaggaggccctgcacctgtaccgggccgggttc
tggagccagtgccaccggctgctgatccaacacctggcctcagactgcatcatcaacgac
aaccacgactacctactggagttcctggaggggctggcggtccctgaacacagcgctacc
atccaggactgggacactgcagggagagtttacctggactacatccgagtcataaagact
ctgcaggacatccagcagatggaaaacgccggctacgagctggagcgcctctacaccgac
gtgacgtctctctgcagcaggatcgagctgctgccctgcagctccgcccgagaccggctc
gcccaatcagaaatggcgaagcgagtggccaacatcctgcgcgtggtgctgagcctgcag
cagggcgacgcggcgtccgactccctcagcatccccctcgcccagctggccccgcacatc
acccgcctgccgatgccagaggactacacgctggaggagctgcgaggcctcacgcagtcg
tacctgcgacagctcatcgtcagccaatga
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integrated database retrieval system
