Semicossyphus pulcher (California sheephead): 138597716
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Entry
138597716 CDS
T10596
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul02010
ABC transporters
spul04148
Efferocytosis
Brite
Transporters [BR:
spul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138597716 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
138597716
NCBI-ProteinID:
XP_069525288
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRNPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLEGFKELAQALQALQNSQSGFKLKHFLRDDETLSTFLRRNTSFSEHNLQQIKDADVNLE
KVLLKGFGVHLRNMCPRKGGGRSLKDFVRISDPQVSTQVQEVLCQAPPTWLNHAEELFMS
NLDFLKPIQRDMRSDPEAVQQVAKATNNLLDSLGSLAVELAGMKSWIDLRNEIVFLTHNA
TSSPSSMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEPAALYDNSTT
PFCNSLVRNMDSNPMSRMIWQAVKPLLLGKILYTPHTPATQRVIHEVNRTFQELGVFRDL
GGMWEEMRPKVWSFMENSEQMDLIRTLLKNNATAGFFHTQLRDTDWTVADISNFLSKKAG
DPRPPGSTLTWREVFNETDQAIMSISRFMECVNLDKLEPVSSEERLVNQSMVLLEDRKFW
AGIVFPDIDPNATELPPKLNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
SYLQDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLNNGILWFSWFISSLIPLLISAGLLVLLLKKGNLLPYS
DPGVVFLFLGSFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGF
GAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIIIMYFDSF
LYGVLTWYLEAVFPGQYGIPRPWFFPFTKSYWSGDKDGKSNKVPLKRKGNADTVCIEEEP
AHLEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYILGRDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEEQVKGEI
EQILQDTGLPHKRRSRTSALSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPFARRGIWD
LLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKK
EPEQSLSSCRNSSSTVSIKKEEECASVSSSDAGLGSEHESEAATIENGPAASVCNVPFVP
PDVSLVSGLILCHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFKDLDQKLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTDVPSDGTLPVRRRRRTHAFGGGDHQSCLRPLTEDDSNE
CNESDGDPECRETDWLKTTDGKGSYQVKGWSLRRQQFVALMWKRFLYARRSRKGFLAQIV
LPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPSDSNMQKLLNALLDPP
GFGTRCMDGHTIPEAPCTIGDEDWMFPEVPESVQQLFSSGNWTMDDPSPACFCSCEGKKK
MLPECPAGAGGLPPPEMKLSASDSLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRY
GGFSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDNLSGFINGLDTKNNVKI
WFNNKGWHSIGAFINVMNNGILRANLPPGRDASSYGISASNHPLNLTKEQLSQVALVTTS
VDVLVSICVIFAMSFVPASFVVFLIHERVSKAKHMQLISGVNPLLYWTANFIWDMCNYVV
PATLVILIFICFQQKAYVSSTNLPALALLLLLYGWSITPLMYPASFFFTIPSTAYVVLTS
VNIMIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADAL
ERFGENRLRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPRPVSKLTKLGPLGE
EDEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGA
GKTTTFKMLTGDTLVTSGEAFLAGKSILREIEEVHQRMGYCPQFDSINELLTGREHLEFY
AVLRGVPEKEVCDVAEWGIRKLGLVKYADKKAGSYSGGNMRKLSTAMALIGAPPVVFLDE
PTTGMDPKARRALWNCIHSVIKEGRSVILTSHSMEECEALCTRMAIMVNGRFRCLGSVQH
LKNRFGDGYTIILRVAGPEPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLTHI
FSILAKNKDTLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDASVRRKDVSIDVPLSPGA
AEGGMSLRESVM
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagcacacagctgggcctgctgctgtggaagaacttcacctacagacgccga
cagacgctccagctgctggtggagatcgtttggccactcttcatcttcttcatcctcatc
gccgtcagactgaactaccctccatacgagcagcatgagtgtcattttccaaataaggcg
atgccgtcggcgggcacgttgccgtggatacaggggatcctctgcaacgccaacaaccca
tgtttcaggaacccaacgccaggcgagtccccaggcgttgtcggcaacttcaacgactcc
ataatttctcgtcttttttcggacgcgaagaagattcttctgtacagtcagaacgataaa
aacctggaaggattcaaggagctggctcaggccctgcaggcgctgcagaacagccaatca
ggctttaagttgaagcacttcctgcgagacgatgagactctgtcaacgttcctgcggagg
aacacctccttctccgaacacaacttgcagcagatcaaagacgctgacgtcaacctggag
aaggtcctcctgaaaggtttcggagtccacctgaggaacatgtgtcccaggaaggggggt
gggcggagtctgaaggactttgtgagaatctcagaccctcaggtgtccacacaggtacag
gaagtcctctgtcaggccccgcccacctggctgaaccatgcggaggagctgttcatgagc
aacctggacttccttaaacccatccagagggacatgaggtccgacccggaggctgtccaa
caggttgccaaggcaaccaacaacctcctggatagtctgggttctctggccgtcgagttg
gcaggtatgaagagctggatcgacctgaggaatgagatcgtgttcctgacgcacaatgcc
acgtcgtctcccagtagcatgtaccaggcggtctccaggatcgtgtgtggacacccagag
ggaggcggcctgcagattaagtccctgaactggtacgaggacagcaactacaaggctctg
ttcggaaaccacaacagcagcgaggacgagccggccgcgctctacgacaactccaccact
ccgttctgtaacagtctggtcaggaacatggactcgaacccgatgtctcggatgatctgg
caggcggtgaaacctctgctgcttggaaagatcctctacaccccccacacccctgccacg
cagagggtcatccacgaggtgaaccggacgttccaggagctcggtgtgttcagggacctg
ggcgggatgtgggaggagatgagacctaaagtctggagcttcatggagaacagcgaacag
atggacctgatcaggactctcctgaagaacaatgccaccgctggcttcttccacactcag
ctgagagacacagattggaccgtcgccgacatctccaacttcctgtccaagaaggcgggg
gacccccgaccgccgggcagcaccctcacctggagggaggtgttcaacgagacggaccag
gccatcatgagcatctcccgcttcatggagtgtgtcaacctggacaaactggagccggtc
tccagtgaggagcgtctggtgaaccagtccatggtgctgctggaggacaggaagttctgg
gcggggatcgtcttccccgacatcgatcccaacgccaccgagctgccccccaaactcaac
tacaagatccgcatggacatcgacaacgtggagcgcaccaacaagatcaaagacgcgtac
tgggacccgggtcctcgggctgacccctttgaggacatgcggtacatctggggcgggttc
tcgtacctgcaggacgtcattgagcaaggcatcatcagagcggtgacgggcaccaaggag
aagacgggcgtgtacatccagcagatgccgtatccgtgctatgtggacgacatattcctg
cgggtgatgagccgctccatgcctctcttcatgactctggcctggatgtactcggtggcc
atcatcctgaagagcgtggtgtatgagaaggaggcgcggctgaaggagaccatgaggatc
atgggactgaataacggcatcctgtggttcagctggttcatcagcagcctgattcctctg
ctgatcagcgccgggctgctggtgctgctgctcaagaaggggaacctgctgccctacagc
gaccccggggtggtcttcctcttccttggctcctttgccgtggtcaccatcatgcagtgt
ttcctgctcagcacagcgttcgctcgcgctaacctggcggcggcgtgtggagggatcatc
tacttcacgctgtaccttccctacgtgctgtgtgtagcctggcaggactacatcggcttc
ggagccaaagtgttcgctagcctcctgtcccccgtggcgttcgggttcggctgtgagtat
tttgctctgtttgaggagcagggcgtcgggatccagtggaagaacctggtgtccagtcct
ctggaggaggacgacttcagcctgcgcaccgccatcatcatcatgtacttcgactccttc
ctgtatggagtcctcacctggtacctggaggctgtgtttccaggtcagtacgggattcct
cggccctggttcttccccttcactaagtcctactggtcgggagataaagacggaaagtcc
aacaaagtccctctgaagcgcaaaggaaacgcagacactgtgtgcatcgaggaggagccg
gctcacctggagcccggagtctacatcgagaacctggtgaaggtttatcgtcacgggaag
aagctggctgtggacggactgacgctcggattctacgagggacaaatcacctcgttcctg
ggacacaacggggccggaaaaaccaccaccatgtccatcctgaccggcctgttccccccc
acctccggcaccgcctacatcctgggccgagacatccggaccgagctgagcgccatcaga
cagagcctgggagtgtgtcctcaacacaacgtcctgttcagcatgctgacggtggaggag
cacatctggttctacgggcggctcaaaggtctttccgaagagcaggtgaaaggtgagatt
gagcagatcctgcaggacaccgggctgcctcacaaacgcagatccaggaccagcgctctg
tccgggggcatgcagagaaagctgtctgtggctctggccttcgtcggggggtcaaaggtc
gtgatcctggacgagcccacggccggtgtcgacccgttcgcccgcagaggaatctgggat
ctgctgctcaagtaccgacagggtcggaccatcatcctgtccactcaccacatggacgag
gccgacatcctgggcgaccggatcgccatcatctcccacgggaagctgtgctgcgtgggc
tcatctctctacctgaagaaccagctggggacaggatactacctgacgctggtcaagaaa
gaaccggaacaatcgctgagttcctgcaggaactcgtccagcaccgtgtccatcaagaag
gaggaggagtgcgcctcagtcagcagcagcgacgccggcctcggcagcgaacatgaaagt
gaggctgcgaccatcgagaacggcccagcggcgtccgtctgcaacgtccccttcgtcccc
cccgacgtgtccctggtctcgggtctaatcctgtgtcacgtcccagccgcccgcctggtg
gaggacctgggacacgagctcacctacgtgctgccgtacagcgccgccaaggacggggcc
ttcgtggaactcttcaaggatctggaccagaagctgcccgaccttggcatctccagctac
ggcgtctccgacaccacgctggaggagattttcctgaaagtggctgaagataacggagtc
gacaccgacgtgccctcagacggtacgctccctgttcggaggaggaggaggactcatgcc
ttcggaggaggagaccatcagagctgcctgagaccgttaacagaggacgacagcaacgag
tgcaacgagtccgacggagacccggagtgcagggagacggactggctaaagaccacagac
ggtaaaggctcgtatcaggtgaaggggtggagcctgaggaggcagcagtttgtggctctg
atgtggaaacgcttcctgtacgctcgccgctctagaaagggcttcctggctcagatcgtt
ctccccgctgtgttcgtctgcatcgctctcgtcttcagtctcatcgtccccccgtttgga
aagtacccgagtctggagctacagccctggatgtacgaggaccaggtcaccttcatcagt
gacgacgccccctctgactctaacatgcagaagttattgaacgctctcctcgacccgccg
ggcttcgggactcgctgcatggacggacacaccataccagaggccccctgcacaattggc
gatgaggactggatgttcccggaggtccctgaaagcgtccagcagctcttcagctccgga
aactggacgatggatgacccgtctcccgcctgtttctgcagctgtgaaggcaagaagaag
atgctgcccgagtgtcccgccggagccggaggactgccccccccagagatgaagctgagc
gcctcggactctctgcagaacctgacaggaagaaacatctccgactacctggtgaaaact
tacgctcagatcatcggcaagagtctgaagaacaaagtttgggtgaatgaattcaggtac
ggaggattctcattgggagccaggagcactcaggtcctccctccagccaatgagatcgac
gacgccatcgagcgagtgaggaagatctttgagctgcagaagggagcggctgcagatcgg
ttcctggacaatctgtcgggtttcatcaacggtttggacacaaagaacaacgtgaagatc
tggttcaataacaaaggctggcacagcatcggagcgttcatcaacgtcatgaataacggc
atcctgagagctaacctgccgccaggtagagatgccagtagttacggaatctccgcctcc
aaccaccctctcaacctgaccaaggagcagctgtcccaggtcgccctggtgaccacctcg
gtcgacgtgctggtgtctatctgtgtgatcttcgccatgtccttcgtcccggcgagcttc
gtggtcttcctcatccatgaacgtgtcagcaaagccaaacacatgcagctgatcagcggc
gtgaacccgctgctctactggaccgccaacttcatctgggacatgtgtaactacgtcgtc
ccggcaacgctcgtcatcctcatcttcatctgtttccaacaaaaagcctacgtctcatcc
accaacctgccagcgctcgccctgctgctgctgctatatggctggtcgatcactcccctg
atgtaccccgcctccttcttctttacgatcccgagcacagcgtacgtcgtcctcaccagt
gtcaacatcatgatcggcatcaacggcagcatctccaccttcgtcatggagctgtttgga
aacaacgagatcggagggattaacgacatcctgaagaacgtgctcctgatcttccctcac
ttctgtctcggtcgaggactcatcgacatggtgaagaaccaggccatggccgacgccctc
gagagattcggtgagaacaggttacgctcccctctggagtgggacatggtggggaagaac
ctgtttgccatggctgtggagggtgttgtcttcttcatcatcaccgtcctcatccagtac
aggttctgcatcaaacccaggccggtcagtaaactaaccaaactgggtcctcttggggag
gaagacgaggatgtggcccgagagagacagaggatcgtccacggcctcggacacggagac
atcctggagctccgacagctcaccaaggtgtttaagaggaagcagaaaccagcagtggat
cgactgtgtgtggggatacctcctggagagtgttttggactgcttggggtgaacggagcg
gggaagacgaccaccttcaagatgctgacgggagacacactggtaaccagcggggaggcc
ttcctggctgggaagagtatcctgagggagatcgaggaggtgcatcagagaatgggttac
tgtcctcagtttgactccatcaacgagctgctgacaggaagagaacacctggagttctac
gccgtgctcagaggagtccccgagaaggaagtgtgtgacgtggcagagtgggggatcagg
aagttgggtctggtgaagtacgctgataagaaagcaggaagttacagcggaggaaacatg
aggaagctgtccacagccatggctctgatcggggctccacctgtcgtcttcctggacgag
cccaccaccggcatggaccccaaagctcgccgcgcgctctggaactgcatccacagcgtc
atcaaggagggacgctccgtcatcctcacttcgcacagcatggaggagtgtgaggctctg
tgcaccaggatggccatcatggtgaatggcaggttcaggtgtcttggcagcgtccaacac
ctgaagaacaggttcggtgacgggtacaccatcatcctgcgggtggcggggcctgaaccc
gacctgctgcccgtcatgaagttcatcgagagcgagctgagcggcagcacgctgaaggag
aaacaccgcaacatgctgcagtaccagctgccctcctccctcacctccctcacacacatc
ttctccatcctcgccaagaacaaggacacgctccgcatcgaggactactccgtcacacag
accaccctggaccaggtgtttgtgaactttgcgaaggaccagagtgacgactatcactcc
aaagacgcctcggtgagacgcaaagacgtgtccatcgacgtcccgctgagccctggagcc
gctgaggggggcatgtctctgagggagagcgtcatgtga
DBGET
integrated database retrieval system
