Entry |
|
Symbol |
pcdh20l
|
Name |
(RefSeq) protocadherin-20
|
KO |
|
Organism |
spul Semicossyphus pulcher (California sheephead)
|
Pathway |
spul03273 | Virion - Lassa virus and SFTS virus |
|
Brite |
KEGG Orthology (KO) [BR:spul00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138597734 (pcdh20l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:spul01009]
138597734 (pcdh20l)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:spul04515]
138597734 (pcdh20l)
Protein phosphatases and associated proteins [BR:spul01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138597734 (pcdh20l)
Cell adhesion molecules [BR:spul04515]
Cadherins
Protocadherins
138597734 (pcdh20l)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
859 aa
MGHGTPDNMNWAGLLQNLLVVLHLRQIICASSVWFSVPEEQKPGILAGSLSKHFPPPYQL
LTQQYLWMDKNTGNFYTTEQKMDREALCPEETKAEECIILHNAVVGASGDLIQFPVIIED
INDNAPHFENGEIHLRVSEDVTVGTSFLLDDRAQDRDAGFNGELHYHLEDSDGVFSLKAE
EDGSVIMVVQAALDRETRELYQMALVATDCGSDPLSATATLIVTVTDVNDNCPSFSPDSP
SSVTLPGDSLKNTLVAQVKATDPDLGLNAAIVYSLSPKVSERAKQLFSLDSLTGSIRLTQ
DLQSDNSEELLLKVLASSRHCPPADTQVTVSVLPKANQELTIKIGFIAEHQNQTLVLQEN
QPPTVLAVLELEGDSSFKGSSLAIESEVPFTLNLQNGKYLLSTSKPLDYEMKSEHHFPVV
VHGRSSKGSVIIPSRRVIRVLVADVNDNAPQFLQSQYQLEMEENNQPGMSLLQVSATDAD
SGYNGRVTYRLDEHTPTIFNIDSVTGQLSVSASLDREQQGEYKLTVFARDSGSPPLESAA
TVSIRVLDQNDNAPVFLTPHFIFFIPENVPPFAQVGGVGVTDPDEGENGNTELHVVNSSG
PFVVDNTQETLRTTTNLDRETQDRYELYLLASDHGHPVTLTSTARVTIFVEDINDNQPKV
ILPSSNFSCRTVSPATIAGTMITKIYAIDEDSGLNSEITYTVAAPELAQNRSPFQVDPRS
GNITVSQQLLRKDLGMHHLFIVVRDGGKPAPLYTTVWVNLLVNESMEPCHLDRAPTWTGT
PDFGQTPSKAPICEVEDTRSGQMTLFVGLCMMLASACLLVVSAVLYLKQRRGSLRRHKSG
RMEENEIPLRLKDKYYSED |
NT seq |
2580 nt +upstreamnt +downstreamnt
atgggccatgggactcctgataatatgaactgggctggactgctgcagaatctgctggtc
gtgctccatctccggcagatcatttgtgcttcttctgtctggttttctgtcccagaggag
caaaagcctggtattctggccgggtcacttagtaaacactttccacctccgtaccagctc
ctgacccagcagtatctgtggatggacaaaaacacggggaatttctacaccactgagcaa
aagatggatcgcgaggccctgtgccccgaggagacaaaggctgaggaatgcattatttta
cacaatgctgtcgtgggggcctcaggagaccttattcagttccctgtgatcatagaggac
atcaatgacaatgcacctcattttgaaaatggtgaaatacacctgagggtgtctgaggat
gtcaccgtggggaccagcttcttactggatgaccgggctcaggacagggatgctgggttt
aacggtgagctgcactaccacctggaagactctgatggagttttcagtttaaaagcggag
gaagacggctctgtcatcatggttgtgcaagcagctctggatagagagactcgggagctg
tatcagatggcgctggtggccaccgactgcggctcggaccctttaagtgctacggcgact
ttaatagtcacagtgacagatgttaatgacaactgtccgagcttcagccctgacagcccc
agcagtgtcaccctccccggagactccctgaagaacacgctggtagctcaggtcaaagcc
acagacccagatttaggcctgaacgctgccatcgtttactcccttagtcccaaagtctcc
gagcgggccaagcagctctttagccttgacagcctcactgggtccatcagactaacacag
gacctccaaagtgacaactccgaggagctgctgctgaaagtgttagctagcagccgtcac
tgccccccagcagacactcaggtaaccgtatccgtgctccccaaggcgaaccaggagctg
acgatcaagatcgggttcatagcggagcatcaaaaccagactctggtgttacaagagaac
cagccccccactgtcttagctgttttagagctggagggtgacagcagctttaaaggctca
tctcttgccattgagagcgaggtgcctttcactttgaaccttcagaatggtaaatatctg
ctttccacatcaaagcccttagactatgagatgaaaagtgaacatcattttcctgtggta
gtgcacgggagatcatctaaaggatctgtgatcattccttccaggcgtgtgatcagggtg
ctggtggcagatgtcaatgataacgctccacaattcctccagtctcagtatcagttggag
atggaggaaaacaaccagccggggatgtcactgctccaggtttcagctacagacgcagac
agcggatacaacggcagagtgacctacaggctggacgaacacacacctaccatcttcaac
atagactcggtgacaggtcaactgtctgtatccgcctctctggatagggagcaacagggt
gaatacaaactcaccgtgtttgcaagagatagcggctctcctcccttggagtcagcggca
accgtctccattcgtgttctggaccagaatgataatgcccctgtttttctaacccctcac
ttcatctttttcatccctgagaatgtgccgccgtttgcccaggtgggaggtgtaggggtg
acggacccagacgaaggggagaacgggaacacagagttgcatgttgttaacagcagcggc
ccttttgttgtggataacactcaggagacgctacgcaccaccaccaacttggaccgcgag
acacaggaccgctatgaactctacctgctggccagcgatcacggccacccggtcactttg
acttccactgccagggtgactatctttgtggaggacatcaatgacaaccagcctaaagtg
atccttcccagcagcaacttctcatgccgcactgtctctccagcaactatagccggcacg
atgattacaaagatctacgccatcgatgaggactctgggctgaattcggagattacgtac
actgttgcggcaccagagctagcgcaaaaccgcagccctttccaggtggatccaaggtcg
gggaatatcactgtatctcagcaacttctacgtaaagacctggggatgcatcacctgttc
attgtggtcagagatggagggaaaccagctccgctttacaccactgtctgggttaatctg
ttggtcaatgagagcatggagccctgccacttggacagagcgcccacctggacagggacg
cccgacttcggccaaaccccatcaaaggcccccatctgtgaggtggaggacaccaggtct
ggtcagatgaccctgtttgtaggcctgtgtatgatgctggcatccgcctgtctgctggtg
gtgtcggctgttttgtacctgaaacagaggagaggaagtctacggcggcacaagagcggg
cggatggaggagaatgagattccactcaggctcaaagacaaatattactctgaagactaa |