Semicossyphus pulcher (California sheephead): 138597778
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Entry
138597778 CDS
T10596
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138597778
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138597778
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138597778
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138597778
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Protocadherins
138597778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
138597778
NCBI-ProteinID:
XP_069525389
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MAALRWEVPLFLAVVLLVSCSAAPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEVSIDREMLRDCRNLFEGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMASDRDYGTNGVAEYSLSTGP
DADQLFSLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGRPARASSALLRVTVT
DQNDNVPKFERTHYEAELPENSPMGHSVLQVRANDADTGTNGEIDYSLHQASETVQRLLR
IDRSTGIIYVKGLVDREEENFLKFFVVAKDRGPNSKSSKVLVTIIVRDQNDNAPAIEIRG
IGLVTHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASQSAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNTPNFSPALL
EVDFAEGNQPGEKVLAMIATDADSGTNAELAYSIIELSACRLFDIDANSGEVSVKNLLDR
EETERYEFRVAAADKGVPSKTGTATVVINVLDRNDNDPKFMLSGYSFSVNENMAPLNPVG
VVTVTDADKGENARVNLFVEPDNGKFVIQNGTGTILSHISFDREKESTYTFRLKAVDAGD
PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPITPTETRVEVVEAEDIDSGPNAEL
LYTFTGGNPYGLFHISPSSGEITLAQEFTGKHNGLHRLVVRVSDKGKPPRHTTALVHVFV
NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYTLGHRSNILYGSLAGIAAVILAMVVAVV
VIRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQ
KGLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAV
QDLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQLPHRRVTFSTANQAQDLQDAS
QHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDV
AMTGNCTRECTEFGHSDSCWMPGQPSPNHKVSMNAPTLSTFVPYQEMDGQEQLMANGSPK
ALTEERGTGGGGSSSKVANMRFMTPYSSAYPGGGDSSVKDCGLEEIPLSQAVEYHSATTP
TGQTSKREIYL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctaaggtgggaggttccgctgttcctggcagtcgtcctgttggtctcctgc
agcgccgcgcccaccgacatcctgtatcgagttcctgaggagcagccgcccaacacgctg
atcggcagccttgcggcggaccagggcctgcctgacaccggccacctctacaagctggag
gtgggctcgccgtacctgagggtggacggaaagactggcgacatctacaccacggaggtc
tccattgaccgcgagatgctgagggactgtcgcaacctgtttgaaggcgacaaatgtttc
ctagagttcgaggtgtcgatcacagacatggtcaaaggaatcggctcagggccacggctg
atcgagggacgcatcgaggtgctggacatcaacgacaacacgccacagttctcctctccc
atcctcaccctctccatcccagagaacacgcatatcggcgccctcttctccatccccatg
gcctctgatagggactacggcaccaacggcgtagccgagtactcgctgagcaccgggcca
gacgctgaccagctcttcagcctgcaggtcgccgttgacagcgacgagaagctgccccag
ttggttgtaatgggaaacctggaccgcgagaagaaggactcgtacgacctaaacatccgc
gtggtggatggtgggaggccagcgagggcgagcagcgctctgctgcgggtcaccgtcacc
gaccagaacgacaacgttccaaagtttgagaggactcactacgaggccgaactgccggag
aacagcccgatgggacactctgtgctgcaggtcagagccaatgatgcagacactggcacc
aacggagagattgactacagcctccatcaggcatcagagaccgtccagaggcttctgcgc
attgaccgttcaactggaatcatctatgtcaagggcttggtggaccgggaggaggagaac
tttctcaagttctttgtggtcgccaaagatcgagggcctaactcaaagagctccaaggtc
ctggtgaccatcattgtcagggatcagaatgacaacgcaccggccattgagatccgtggc
atcggcttggtgactcatcaggatggtgtggccaacatctctgaggacatgcccattggc
acaccggtggctttggtccaggtgtcagaccgggatgagggggaaaatgcagttgtgacg
tgtgtggttgctggcgacgtcccatttcagcttcgacctgcaagccagtcagctaatgat
cgtaagaggaaatacttcctgcagacaactaccctgctggattatgagcgtgtcaaggat
tacaggattgaaattgttgctgtggattctgggaacccagccctgtccagcaccaactcc
ctcaaagttcaggtcacagacatgaatgacaacacaccaaacttttccccagcgttgctc
gaggtggactttgctgagggcaaccagccaggtgaaaaggtgctggctatgattgcaact
gatgcagacagcggcaccaacgcagagctagcttatagcatcattgagctctcggcctgt
aggctctttgatatcgatgccaacagtggggaagttagtgtgaagaacttgcttgatcgg
gaggagacggagcggtatgagttccgtgtggcagcagcagacaagggtgtccctagcaaa
actggcactgctacagtggtgattaatgtcctggatcgcaatgacaatgaccccaagttc
atgctgagcggctacagcttctctgtcaacgagaacatggccccactgaatcctgttggt
gtggtgactgtcactgatgctgataagggcgagaacgccagagtgaatctgtttgtagaa
ccagacaatggcaagtttgtcatccagaacggcacaggaaccatcctgtctcacatatcc
ttcgaccgtgagaaggagagcacttacaccttccgtctgaaggctgtggatgcaggtgac
ccacctcgatcctcctatgtgggtgtgaccatcaatgtcctagacgagaatgataacgcc
ccctatgtcaccaagccggccaactcctcctacacctatatgtcgcctatcaccccaaca
gaaacccgtgtggaggtggtagaggcagaggacattgactctggacccaacgccgagctg
ctctacaccttcacaggcggcaacccatatggcctgttccacatctcacccagcagtggg
gaaatcacactggcacaggaattcaccggtaagcacaacggtctgcaccgcctggttgtg
agggtcagcgacaaaggaaaacctccccgtcacaccaccgccctcgtccacgtttttgtc
aacgacaccaaatccaatgtttccctcattgaggcgctggttggacacagcctgtacaca
cctctggacagggacattgccggagatcccaactacactcttggtcatcgcagcaacatc
ctgtatggcagccttgcgggtattgcagctgtgattctggccatggttgtcgccgtggtt
gtcatcagacaccgactgcagaaggacacgaagagtggttatcaagctggcaagaaggag
agtaaagatttgtacgctccaaagcaaggccccaaaaatggtaaggggaaaaagagcaaa
aaggggaaagctcccaaaccagccaagccactggaggaggacgaggaggccagcttgcag
aaaggccttaaatttaacctcatcaacgacaatgtcaacgacagtcccagaatccacctg
ccccttaactacccgccaggaagccctgacttgggccgccactaccgctcgaactcccct
ttaccctcaattcaactacagcctcagtcgccctctgcctccaagaagcaccaggctgtt
caggacctccctgcgactaacacctttgtgggaacgggtgacaacaactccacaggctcc
gaccaatattcggattacagctacaaggccaacccgcccaaatacagcagcaaacagctc
ccccaccgccgagtgaccttctccactgccaatcaggcgcaggacctgcaggacgcgtcc
cagcacagctactacgacagcggcctggaggagtcggagacgcccagctccaagtcgtcg
tcggggccccggatcgggcccctggcgctgccggaggaccactacgagcggaccacgcct
gacggcagcatcggcgagatggagcacccggagaacgatctcaggcctcttcccgacgtg
gcgatgaccggtaactgcacccgcgagtgcaccgagttcggccactctgactcctgctgg
atgcccggccagccttcccccaaccacaaggtgtccatgaatgcccccacgctctccacc
tttgtgccttaccaggagatggacgggcaggagcagctgatggccaacggcagcccaaag
gccctgacggaggagcgtgggacgggtggtggtggcagcagctccaaagtggccaacatg
cggtttatgacaccctacagcagtgcctaccctgggggcggagactcgtccgttaaagac
tgtgggctggaggagatcccgctgagccaggcggtggagtaccactcagccaccactcca
accggccagacctccaagagggagatctacctgtga
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integrated database retrieval system
