Semicossyphus pulcher (California sheephead): 138597930
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Entry
138597930 CDS
T10596
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138597930 (gemin5)
03041 Spliceosome [BR:
spul03041
]
138597930 (gemin5)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138597930 (gemin5)
mRNA cycle factors
P-body specific factors
138597930 (gemin5)
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138597930 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_GEMI5
WD40_CDC20-Fz
GEMI5_RBS
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_Aladin
WDR55
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
TPR_IF140-IFT172
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
138597930
NCBI-ProteinID:
XP_069525602
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MHERSLPASPNWYCSRCSDVNSSGLLGVGAKNNIYLIDVSASSCRVVGELVGHKDLVSGF
AFCQHAGQSHICVSSSSDGSVRFWDSDNKSLVREDAAHQTSVTALHWSPVDKNLVVSGDE
KGIVVCHWYNTGDTTSFFPEPRTIFCLSCSPHTWSTVAVGYKDGMIVLIDVSKKGEVMHR
LRGHDDEIHSLAWSSVIGEDALYSRPEDSEAFNGVSAGDEKGCYLASGSKDQTARIWSTA
KGKGVMTLKLPYIKKRGSAVDPGVKERLWLHVHWPKGQQTQLVSSCFSGELVMWDLTRAG
KQRWTLFGTSSEGQNHNRIVFNTSSVHLQDDRELLISTSMDREIKCWDLASLDCLWTLPT
LGGFVYALTFSPVGTGCLGLGVGDNMIRVWNTLTTQNQYDTRSFWQGIKSKVTALAWHPK
KEGSLSFGTDDGKVGIYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPMSFGAAGGKPSYS
LYSCAGEGIILQHDVSKLSGEATDIDKLIRDTNNIKHKLSPHTDLSWKPDGRVVAIGNED
GCIDVYQAPSLKLLCSIQQHHKIINTLRWHHDHSSSPELHCLLASGSSNATVYVHDLRSI
IENPPESPAMVTEPYRRLCGHTGKITGMAWSPHHDARLVTVSYDGTAQVWDVLQEAALSN
YRDHVGYLLSVDWSPVDPDVIWTGGKDFTVQEWRVSKQEFTKPPKGKKMVALSEKMKANP
KQKRKNKKASGAGGAAPLEMNGEPATGGQKAATGQELSGEDEEDEVSSTNSPVPPPATFE
MQRKSSISVKSKDKPVFPESNLLKKKKPRSMLPVSTSMDHRPKEDLLQDCITLASVRHND
APPAGCVPGQGEHIHLGLFSDRQALYRMFEAEEESHVEAGHYDSVVYLRLWSGDLEGALQ
LATEKGELTDHLLSIAPMAGFQVWSRTVEAFVKQLCLQEQYLKAASHLLSINKLYEAVDL
LRSHKLYREAIALAKARLPADEPVLKELYTCWAAVLEKDGHFSAAAKCYLAAGASFDAAK
VIARKNDVPSVRTAASLARISGEVALAQSLALRCAKDLVADLDWVGAQEVLSSQESLLVH
RLHLCVAELLSVMLADSPAEPQSCISSHPWASPGEAHVSIQDRVRDVWEEQFGVSHESAG
HHSVEALLQELKSVESPKPTASVPLRQVQLYSSLHVTRAVLSWLLDDDGQLIKELWQAVA
WFRDAAHSAQLCKLLFPDGDASVFSKKHSKTLHHKEEEAKAAADSLQAFVHYHRLYEHWW
RNSTQIQNGFSHSAADSSPGDELKEKVVNGGVSESEESVCPEPRRFDKLDFNASLLLSEP
HAACQAAQRSAREIQERLAAMVLQHSRVQGGVLGSGEKEASAATQTSGESSDNQGSADAG
ERSEDPDTLLSLSSKMSEYQKKLADLPATIKTYPHPDVIECCLVLLHLSRSSTSVSESLQ
QEAKDLLRKHGTSPSVLRASQRFLT
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaacggtcgctccccgcctctcccaactggtactgctcgcgctgcagtgacgtc
aacagcagcggtttgctgggcgtcggagccaaaaacaacatctatttgattgacgtgtct
gcatcctcctgcagggtcgtaggtgagctggtcggtcataaagacctggtgtcaggcttt
gcattctgtcagcatgctgggcagagtcacatctgtgtcagctcctccagtgatgggagt
gttcgcttctgggattcagacaacaagagtcttgtacgggaggatgcagctcatcagacc
tccgtcacagcgctgcactggtctccggtggataaaaacctggtcgtgtctggggacgag
aaaggcatcgtggtctgtcactggtacaacacaggagacacgaccagcttcttcccagag
cccaggaccatcttctgccttagctgctccccacacacctggagcactgtggctgtgggg
tacaaagatggtatgatcgtgctgatcgatgtgagtaagaaaggcgaggtgatgcaccgt
ctccgtggacacgatgatgagatccactcgctggcgtggtcgtctgtgattggtgaagac
gccctctacagcagacctgaggacagtgaagcattcaatggagtttctgcaggagatgag
aagggctgttatcttgcctctgggagcaaagaccagacggcaaggatctggagcaccgca
aaaggaaaaggtgtgatgactctgaagctgccgtacataaagaaaagaggctctgcagtt
gaccccggggtcaaagagagactgtggctccacgtccactggccgaaaggacaacagaca
cagctggtgtccagctgcttcagtggtgagttggtgatgtgggatttgaccagggcagga
aagcagaggtggacactgtttgggacatcttcagagggtcagaaccacaacaggatcgtc
ttcaacacgagttcagtccacctgcaggatgacagagagctgctcatcagcacctccatg
gacagagagattaagtgctgggacctggcctctctggactgcctctggactctgcccacc
ctgggtggtttcgtctatgccctgaccttctcccctgtgggcacaggctgtctggggctg
ggtgtcggagacaacatgatccgggtgtggaacacactgaccacccagaatcagtacgac
acccggtccttctggcagggcatcaagtccaaggtcacagcgctggcgtggcatccgaaa
aaagaaggatccctgtcttttggaacagatgatggaaaagttggaatctatgacgtcttc
tcaaacaagcctcctcagatatcgagctcctatcaccggaaaacagtgtacactctggcc
tggggacccccagtccccccgatgtcatttggtgcagcaggaggaaagccgtcctacagc
ctgtacagctgcgccggtgaaggcatcatcctgcagcatgatgtatctaaactgagtgga
gaggcgacggacatcgacaagctgatcagagacaccaacaacatcaagcacaagctgtct
ccacacaccgacctcagctggaagccagatgggagagtggttgctatcggcaatgaggac
ggctgtatcgacgtgtatcaggctcccagcctgaagctgctgtgcagcatccagcagcac
cacaagatcatcaacacgttacggtggcaccacgaccacagctcttctccggagctgcac
tgcctcctggcctctggctccagcaatgccaccgtctatgtgcacgatctgcgctccatc
atagagaatcctccggagagcccggcgatggtgacggagccgtatcgcaggctgtgtggc
catacaggtaaaatcactggcatggcctggagtccacatcacgatgccaggctggtcact
gtctcatatgacggcacagcccaggtgtgggacgtgctgcaggaggcagctctctctaac
tatcgggatcatgttggttacctgctgagcgtggactggtctcctgttgatccggatgtg
atctggactggagggaaggacttcaccgtgcaggagtggagagtctctaaacaagagttt
acaaagcctcctaaaggtaaaaagatggtggctctgtcagagaagatgaaagccaatccc
aagcagaagcggaagaacaagaaggcgtcaggggcgggaggagccgccccgctagagatg
aacggagagccagctacaggagggcagaaggcggcgacgggacaggagctgtctggtgaa
gatgaggaagatgaagtcagctcaacgaacagtcctgttcctccaccagccacttttgag
atgcaaagaaaatcctccatcagcgtaaagagcaaagacaaaccagtctttccagaatcc
aaccttctgaagaagaagaagcctcgctccatgctgcccgtcagcacctccatggaccat
cggcccaaagaggacctgctgcaagactgcatcactctggcctcagtcagacacaacgat
gcaccccctgcaggctgtgtcccaggccagggggagcacattcacctgggtctcttctct
gacagacaggctctgtaccgcatgtttgaggcagaagaggagagtcatgtggaggcgggt
cactacgactctgtggtgtacctgcggctgtggagcggagacctggagggggcgctgcag
ctcgccacagagaaaggagagctgactgaccacctgctctccatcgctcctatggccggg
ttccaggtgtggagcaggacagtggaggcctttgtcaagcagctgtgtctgcaggagcag
tacctgaaggcagcgtcccacctgctgtcaatcaacaagctgtatgaggccgtcgacctg
ctgcgttcacacaaactctacagggaggccatcgctctggccaaagcccggctgccagca
gacgagcccgtcctgaaggagctgtacacctgctgggccgccgtgctggagaaggacgga
catttctctgctgctgctaaatgttacctggctgctggtgctagttttgacgctgctaaa
gtcatcgccaggaagaacgacgtcccctctgtgaggacagcagccagtctagccagaata
tcaggagaggtcgctcttgctcagtcgctggcgctgcggtgcgctaaagacctggttgct
gatctggactgggtcggggcccaggaggtcctgagctcacaggagagcctgctggtccac
aggctgcatctctgcgtcgctgagctgctgtctgtgatgctggctgactctccagctgag
cctcagtcctgcatctccagccacccgtgggcgtcgccaggtgaggctcacgtcagcatc
caggaccgagtgagagacgtgtgggaggagcagtttggtgtctcacatgagtcagcagga
catcacagcgttgaagctcttctgcaggagctgaagtctgtggagagtccaaaacccacc
gccagcgttcctctcagacaggttcagctgtattcatcgctccacgtgacccgtgccgtg
ttgagctggttgttggatgatgatggacagctgattaaggagctgtggcaggcggtggcc
tggttcagagatgctgctcactctgcacagctctgcaagctgctgttccctgatggtgac
gccagcgttttttccaagaaacattccaaaactcttcatcacaaagaagaagaggccaaa
gctgctgccgacagcctgcaagcgtttgtacattaccaccgcctctatgaacactggtgg
aggaactccacacagatccagaacggtttctcacactcagcagccgattccagccctgga
gacgagctgaaagagaaagtggtgaacggaggagtgtcagagtcagaggagagtgtgtgc
ccggagccaaggaggtttgacaaactggactttaatgcgtctctgcttctgtctgaacct
cacgctgcctgtcaggccgctcagaggtcagcgagagagatccaggagcggctggcagcc
atggtgctgcagcacagcagagtccagggaggagtgctgggctctggggagaaagaggcc
agcgcagctacgcagacctccggagagtcttcagacaaccaggggtctgctgatgctgga
gaacgatctgaggacccggacactctgctgtctttgtcgtccaagatgtcggaataccag
aaaaagctggctgacctgcctgccacaatcaagacgtatcctcacccagacgttatcgag
tgctgcctggttctccttcacctcagcaggtcttcaacgtctgtctctgagtctctccaa
caagaggccaaagatcttctccgcaaacacggaacgagtccttctgtccttagagcctcc
caacgattcctcacctga
DBGET
integrated database retrieval system
