Semicossyphus pulcher (California sheephead): 138597995
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Entry
138597995 CDS
T10596
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04010
MAPK signaling pathway
spul04210
Apoptosis
spul04218
Cellular senescence
spul04620
Toll-like receptor signaling pathway
spul04621
NOD-like receptor signaling pathway
spul04622
RIG-I-like receptor signaling pathway
spul04623
Cytosolic DNA-sensing pathway
spul04625
C-type lectin receptor signaling pathway
spul04920
Adipocytokine signaling pathway
spul05132
Salmonella infection
spul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138597995 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138597995 (nfkb1)
04218 Cellular senescence
138597995 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138597995 (nfkb1)
04621 NOD-like receptor signaling pathway
138597995 (nfkb1)
04622 RIG-I-like receptor signaling pathway
138597995 (nfkb1)
04623 Cytosolic DNA-sensing pathway
138597995 (nfkb1)
04625 C-type lectin receptor signaling pathway
138597995 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138597995 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138597995 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
138597995 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138597995 (nfkb1)
Transcription factors [BR:
spul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
138597995 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
138597995
NCBI-ProteinID:
XP_069525725
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAGDDHYLHNSNQIFDHLMMDPTWEFTHFQGMSQNASQPAVDGPFLHIVEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNRKTYPTVKISNYQGPARVVVQLVTALTTQAQLHAHSLVGKQ
CDKGICIADLQPKDSNISFPNLGILHVTKKNVAKTLEDRMIEAYRMGHNCGVSIHPEIDA
LQGEVRVPRELSDHQHTVISTAAALQAKEMDLSVVRLMFTAFLLDSDGGFSRRLEPVVSE
PIYDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIMVRFFEEDDSGVTWEAL
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPTPVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFHDFSGHGGGGGGGGGGGGLYRGGGGPAAGGGPGSAGGGGGYFQGFTT
YNYGAGGGGGGGGGFSTGYSAGLGGGGIKNASQGEVADDSSDDGDPDDDSGSGAARRLAA
QPEGLEVGESTEEGGVSVEPEADRDERLVISRQLEALFQYSVTGDSAYLLAPQRPLMDAQ
DDDGDTGLHLAVLHSQQEALKSLTQVVSALPGEEMLNMRNHLYQTPLHLAVITQQREAVE
ALLLAGADPTLTDRYGNTVLHLASQLEGGGMVQFLLHHRELRGLLDHTNTAGLCAIHLAV
LSNQLSSLRELLGGGANVEAQERSCGRTALHLATEAENVSLAGCLLLEGNATVDCCTFNG
STPLHIAAGRSCIKLTALLMAAGADPHRENFEPLFFREEECCEEEREEEEDEGYIPGTTP
FNMAANIQVLELLNGKEYEPKSPQRRFNPPQGDLSSLDVEVKQEVCRSLESEGCWENLAH
SLGLGILNTAFRLSPSPAKTLLDSYEVSGGTVRDLLAGLRSVGDRRALSVLEEALGHHDD
QEKQTTNEMRGEPLSAQVRDLKVDVGIDSGVCDSGVELSTA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacgaccactaccttcacaattccaaccagatctttgaccacctaatgatg
gatccaacgtgggagtttacacattttcaagggatgtctcagaacgcttcccagcccgca
gtggacggacccttcctgcatattgtggagcagcccaaacagcgcggcttcaggttcagg
tacggctgtgagggtccgtctcacggcggtctgcccggagcctccagtgagaagaacagg
aagacctaccccaccgtcaagatcagtaactaccagggtccggcccgggtggtggtccag
ctggtgacggcgctgaccacccaagctcagcttcacgctcacagtctggtgggaaaacag
tgcgacaaagggatctgcatcgccgacctccaaccaaaagactccaacatcagttttccg
aaccttggcatcctccatgtgacgaagaagaacgtggcgaagactctggaggacaggatg
atcgaggcctacaggatgggacacaactgtggagtctccatccaccccgagatcgacgcc
ctgcagggggaggtccgagtccccagagagctcagcgatcaccagcacactgtgatcagc
acagcagcggctcttcaggctaaagaaatggacctcagcgtggttcggctcatgttcaca
gccttcctcctcgacagtgacggaggtttctccagacgactcgagccggtcgtgtccgaa
ccgatctacgacagcaaggctccgaacgcctccaacctgaagatagtgaggatggatcgg
actgccggctgtgtgagcggaggagaggaggtctacctgctctgtgacaaagtccagaaa
gatgacatcatggttcggttctttgaagaggacgactcgggggtgacctgggaggcgctg
ggagatttctcccccacagatgttcacagacagttcgccatcgtgttcaagactccaaag
tatcgagaccagaacctccagaagccgacgcccgtgttcgtccagctcaagaggaagtct
gacaacgagaccagcgagcccaaacccttcacctaccacccccagatcatagacaaggag
gaggtgcagaggaagagacagaagacgttaccaaacttccatgacttcagtggtcatgga
ggaggaggaggaggaggaggaggaggaggaggtctgtacagaggaggaggaggtcctgct
gcaggaggaggacccggttctgcaggtggaggaggaggttactttcaaggctttaccacc
tacaactatggtgccggaggcggaggaggaggtggtggtggtttctccacaggttactca
gcgggtctgggaggaggaggcatcaaaaacgcctctcagggtgaagtcgcagacgacagc
agcgacgacggagatccagatgacgactcgggttcaggggctgcaaggagacttgcagcc
cagcctgaaggcctggaggtgggggagagcactgaggagggaggggtcagtgtggaacca
gaagcagacagagacgagcggctggttatcagcagacagttggaggctctctttcagtac
tcagtcacaggagattcagcgtacctgctggctccacagcgccccctgatggacgcgcag
gacgatgatggagacaccgggctccatttggcagttctccacagccagcaggaggcgctg
aagagtctgactcaggtcgtctctgctctgcccggtgaggagatgctcaacatgaggaac
cacctctaccagactcctttgcacctggctgtgatcacgcagcagagggaggcggtggaa
gcgctgctattggccggcgccgacccaactctgacagatcgttacggcaacacagttctc
cacctggcgtcccagctggagggaggagggatggtccagttcttactccaccacagagag
ctgagaggactgctggaccacaccaacacagcaggtctgtgtgcgatacacctggccgtt
ctgtccaatcagctgtcttctctcagggagctgctggggggcggggctaatgtggaggct
caggagcgcagctgtggacggaccgccctgcaccttgccaccgaggccgagaacgtgtct
ctggctggctgcctgctgctggagggaaatgccacggtggactgctgtacctttaatggc
tccaccccccttcacatcgctgcagggcggagctgcatcaagctaaccgctctcctgatg
gctgcaggtgcagaccctcacagggagaactttgagccgctgttcttcagggaggaggag
tgctgtgaagaggagagggaggaggaggaagatgaaggctacatcccaggaaccactcca
ttcaacatggccgccaacattcaggtgttggagcttctgaacggtaaagagtacgaacca
aaatctccacagagacgcttcaaccctccccaaggcgacctgtcgagcctggacgtggag
gtgaaacaggaagtgtgtcgctccctggagagtgaaggatgctgggagaatctagctcac
agtctgggtctcgggatcctcaacacggccttcagactgagcccctcccccgccaaaaca
ctgctggacagctacgaggtttcaggcgggacggtcagagacctgctggctggtctgagg
tcagttggagacaggagagcactgagcgtcctggaggaggcgctgggtcaccatgatgac
caggagaagcagacgaccaacgagatgagaggtgagcctctgagcgctcaggttcgggac
ctgaaggtggacgttgggatcgacagcggggtgtgtgacagcggggtggagctctccacg
gcatag
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