KEGG   Semicossyphus pulcher (California sheephead): 138598134
Entry
138598134         CDS       T10596                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
spul  Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:spul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spul03041]
    138598134 (smu1a)
Spliceosome [BR:spul03041]
 Complex B
  Other components
   Complex B specific factors
    138598134 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F VPS8_N PROPPIN LisH_PAC1 zf_topless WD_LRWD1 DUF7165 LisH LisH_WDR26
Other DBs
NCBI-GeneID: 138598134
NCBI-ProteinID: XP_069525936
LinkDB
Position
Unknown
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLTTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHIISASSDGTVKVWNMKTTECSNTYKPLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TIHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaagttgaatccgcagacgtgatccgtctgatcatgcagtacttgaaggag
aataatctgcaccggactctgaccaccctgcaagaggagaccacagtgtcgctgaatact
gtggacagtatagagagctttgtggcagacataaacagtggtcactgggatactgtcttg
caagccatccagtccctcaagctgcctgataagactcttatagacctctatgaacaggtg
gtcttagagctgatcgagttgagagagttgggtgcggcccgttcactcctcaggcagacc
gaccccatgatcatgctgaaacagacccagccagagagatacatccacctggagaacctg
ctggctcgttcttactttgatcccagagaggcgtatccagatggcagcagtaaagagaag
cgacgggcggccatcgctcaggccctggcaggggaagtcagcgtggtgcccccctctcgt
ctcatggctctgctgggacagtctctaaagtggcagcagcatcagggtctcctgcctcct
ggtatgaccatcgatttgttcaggggtaaagctgctgttaaagatgtggaggaggagcgc
ttccccacccagctcagcagacacatcaagtttggacagaaatctcatgtggagtgttcc
cggttctctcctgatggtcagtatttggtcaccggctccgtggacggcttcatcgaggtc
tggaacttcaccaccggcaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgatgccgtgttgtgtatgtgcttcagtcgagacacagagatgttggcc
accggagctcaggatggaaagatcaaggtgtggaagatccagagtggtcagtgtctgagg
aggtttgaacgcgcccacagtaaaggtgttacatgcgtcagtttctgtaaagacagcagc
cagctcctcagtgcctcctttgaccaaacaatcagaatccatggattgaagtcgggtaaa
actctgaaggagttccgcggtcactcctcatttgtgaacgaagccaccttcactccagac
gggcaccacatcatcagcgcttcctcagacggtacagtcaaggtgtggaacatgaagacc
acagagtgctccaacacctacaagcctctgggcacgtcagccggcacagacatcacagtg
aacaacgtcatcctgctgccaaagaacccggagcactttgtcgtgtgtaaccgctccaac
actgtggtcatcatgaacatgcaggggcagatcgtgaggagtttcagctccggtaagagg
gaaggtggtgactttgtgtgctgcactctgtcgcctcgtggcgagtggatctactgcgtg
ggagaagactttgtgctctactgcttcagcacagtcaccggcaagctggagagaacgctg
acgatccacgagaaggatgtgatcggcatcgcccaccacccccaccagaacctcatcggc
acctacagtgaggatggccttctgaagctctggaagccttaa

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