Semicossyphus pulcher (California sheephead): 138598355
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Entry
138598355 CDS
T10596
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138598355 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138598355 (clp1)
Enzymes [BR:
spul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
138598355 (clp1)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
138598355 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
TniB
MMR_HSR1
AAA_16
AAA_22
AAA_18
CbiA
Motif
Other DBs
NCBI-GeneID:
138598355
NCBI-ProteinID:
XP_069526236
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MATEVVEKTSEDAPASGKVSTRFDLEKETELRFEVEAGEAAEQVELELLTGMAEVFGSEL
NRNKKYTFGPGSKIAVFTWQGCSVNLYGKPEVAYISKDTPMLLYLNTHAALEQMRKQAER
DNERGPRVMVVGPTDVGKSTVCRLLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIE
RPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSRLAEVFSQRCEVNRKASVGGCIIN
TCGWVKGSGYQALVHCASAFEVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERS
KECRRDARDEKIREYFYGFRGVSFYPFSFEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDT
QLKLVPVTPGRDLTYHVLSVSSAEDGEEGARKGIVESPVCGFIVVTYVDTQLQVMKVLSP
APRPLPRHTLLIMDIRFMDMK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaggttgtggaaaagacaagtgaagatgccccagcgtctggaaaggtcagc
accaggtttgacctggagaaagagactgaacttcggtttgaagtggaggcaggggaggca
gcagagcaagttgagctggagctcctcacaggaatggccgaggtgtttgggtcagagctg
aaccgcaacaaaaagtacacatttggcccgggctccaagatcgcagttttcacctggcaa
ggctgcagtgttaatctttatgggaagccagaggtggcttatatctccaaggatactccc
atgctgctctacctgaacacacacgccgccttggaacagatgcggaaacaggcagagcgg
gacaatgagagggggccaagggtgatggtggtgggacctacagacgtggggaagtcaaca
gtgtgccggctgctgttaagctatgctgtgagggtgggccggaggccaacactggtggaa
ctggatgttggacagagtggggtgtctgtccctgggacagtgtcggcactgtgcattgag
cgtccggcagatgtggaggagggattttcagtccaggctcctttggtttaccactttggc
tccactaccccagggaccaacattaaactttacaataagctgacatcacgtcttgcagag
gtgttttctcagcgctgcgaggtgaacagaaaggccagcgtgggaggctgtatcatcaac
acgtgcggctgggtaaagggctctggataccaggctctggtgcattgtgcctctgccttc
gaggtagatgtggtgctggtgctggatcacgagaggctctacaatgaactcaagcgagac
cttcctcactttgtgcgggttgtgctcctacctaaatctgggggtgtggtggagcgctcc
aaggagtgtcggcgggatgctcgggatgagaagatacgtgagtacttctacggcttccga
ggagtgtctttctaccctttctcctttgaagtacgtttctcagacgtccgcatctataag
atcggagcaccatccatccctgactcgtgcttgccgctggggatgtctcaggatgacaca
cagcttaagttggtgcctgtgacaccagggagagacctcacctatcacgtgctgagtgtg
agcagtgccgaggacggagaagagggtgctaggaagggaatagtggagagccctgtgtgt
ggttttattgtggttacttacgtggacacacaattacaggtgatgaaagtgttgtcccca
gcgccaagaccactacccagacacactctgcttatcatggacatccgcttcatggacatg
aaatga
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integrated database retrieval system
