Semicossyphus pulcher (California sheephead): 138598359
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Entry
138598359 CDS
T10596
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138598359 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138598359 (rbm22)
Spliceosome [BR:
spul03041
]
Complex B
Other components
Prp19-related factors
138598359 (rbm22)
Complex C
138598359 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
138598359
NCBI-ProteinID:
XP_069526240
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPGTSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGPMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctcggatccaacacctacaatagacagaactgggaagacgcggatttc
ccaattctgtgtcagacatgtttaggagaaaacccttacatccgtatgaccaaggagaag
tatggcaaagaatgcaagatctgtgctcgaccctttaccgtgttccgatggtgtcctggg
acacggatgcgtttcaagaagactgaggtctgtcagacctgcagtaaaatgaagaatgtg
tgtcagacgtgtctgctggacctggaatatggtttgcccatccaggtcagagacactggg
ctgtcagttaaagatgaggttccgaggtcagatgtgaacaaagagtactacacgcagaac
atggagagagagatagccaattctgacggcacacggccggttggccagcttggtaaagca
cccagttctagtgacatgctgctaaagctggcccggacaactccatattacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtccc
tataggcacgagaagcccacagatcccgatgatcctctagccgaccagaacattaaggat
cgatactatggcatcaatgacccagttgctgacaagctactgaaacgtgcctcgactatg
ccacgactggacccaccagaggacaagtccatcagcaccctctacataggcggtttggga
gatactgttacagatggagatctcaagagtcacttctaccagtttggtgagattcgcacc
ataaccatcgtccagaggcagcagtgtgccttcatccagtttgccacgaggcagtcggct
gagatggctgctgagaagtccttcaacaaacttatcatcaatggacggaggctcactgtt
aagtggggaaggtctcaggcagcaagagggaaggagggcatcaaagatggcgtcagtgag
atgggcaccagacttgatcctgtacctggtctgcctggagctctgcctccaccaccagct
ttagatgaggaggctcctgcaaactacttcaacctggaccctggcacctctcctgcagtc
atgaacatagctctgcctccacctcccggcatcaacccacctcctccaggttttggtcct
ccaatgtttcaccccatgggccccatggctccacccatgccccctccgatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggcgcccacgctgca
catggctcacgtcacggcgaatag
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