Semicossyphus pulcher (California sheephead): 138598408
Help
Entry
138598408 CDS
T10596
Name
(RefSeq) uncharacterized protein
KO
K16669
protocadherin Fat 4
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Cadherin related
138598408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
TY-Chap1
WLS-like_TM
7TM_GPCR_Sri
Motif
Other DBs
NCBI-GeneID:
138598408
NCBI-ProteinID:
XP_069526293
LinkDB
All DBs
Position
Unknown
AA seq
2406 aa
AA seq
DB search
MFLFQTLSFYFLLLFLRGAYGDMSYSFPEEMKRGSVIGNIAKDLGLKTGALSNRRARIDT
DGTDVRYCDINLNNGELFVADRIDREGLCGEKASCILKHELVLENPLELHRITLHINDIN
DNSPQFKEESINIEIRESTFRGARFVIEEAHDADVGQNSVQQYSLKKDENFILAADGNTI
ELVLDKELDREKQKEIHLLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP
ENSPLDTVVVTVSASDADEGINGDVTYDFGHVTEDVKKIFSIDRKVGEIKVIGAVDYETT
SSFEIRVKAKDGLGLSSYAKVMISITDVNDNAPVVSLKSLMNPIPEDTTPGTEVGIINVQ
DRDSETNRQVRCSIQQNVPFKLVPSIKNYYSLVSTGQLDRELVSDYNITITATDEGSPPL
SSSKTVELSVADINDNPPVFEEQSYSAYVSENNKPGSTLCSVTARDPDWRQNGTVIYSLL
AGEVNGAPVSSYVSVNGDTGVIHAVRSFDYEQFRSFKVAVMARDNGSPPLSSNVSVSVFI
SDVNDNSPQILYPAPEGNSFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSTD
PGLFTIGVHSGEIRTQRDISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPE
LKDISYDEKNSKLTSYLIIALVSVSTFFLTFIIIILGVRFCRRRKPRLLFDGAVAIPSAY
LPPNYADVDGTGTLRSAYNYDAYLTTGSRTSDFKFVASYNDNTLPADQTLRKSPSDFAEV
FGDCDDSPEVGTSKVSTGNMFLEACLKMDHRTNLKWWLHFLLLALLFGVSSGEVRYVLPE
EMQRGSVIGNVARDLGLKVSELYARRARIVAEGTSQLCELDAASGNLLISQRIDREELCA
QNSVCILQYQLLLEDPLQAYSLVLDIADINDNSPVFAAGEIQLDLVESTVLGRRFPLESA
HDPDLGTNSVREYKLSPNDHFALEMSTQINGNAYLELVLKKPLDREAQAEHVLKINGIDG
GNPVRSGTASIHVRVLDANDNVPVFSQRVYKASVPENSAIGTLIATLNATDFDEGVYGEI
TYSFSHLSDKIGGVIEINPLSGEVRVAGPIDYEDASTHELDVQAKDGGGQASHCKLIIDV
IDVNDNKPVIEIKSASANVAEDSKPGTMVALMNVYDLDTGSSGRVTCTIADDVPFKIVSE
VKNYYMLVTDGMLDREFQPEFNITVTATDAGSPSLSSVKVLTIVVNDINDNPPTFTQREY
NANLLENQPVGTFVMKVKAEDIDDGSNAKTLYQISRDTNSEVSSFLTINSDTGELFTSRL
FDYEQSVYFQIKVTARDGGSPSLSTTCTVNVFIKDQNDNTPVVLYPVQTSGFVAEDMVPI
EAPRGYLVTKVVAVDADSGHNAWLSYRIIKATRPNLFMVGLHTGEVRTVRPFMEDDEQKQ
SLVVLVTDNGPESLSATATVSIVIGDGLPVLNELFEFADESQDNDDLTLYLIIALTAVSS
LLILLISGVFYFKLCRRSYVYRSTTASLPVFPTAYCPPSFTDFSRCGTLLKDDRYDSFLT
TGSWRGDFRFSSNTDTDTLKQRSAAYQKNTLRRASTDRASLKVRAGGPHPCYVLQAHLVS
ILLFCVVAAVCGQIRYSIPEEMRKGVFVGDVAKDLGLDVKRLVSGRARLVIDDESQYVAL
NQNKGHIVVNERIDREKLCAKKSPCSFSLEIVLEDPLELFSITIEIQDVNDHAPAFPKKE
INLEISESTPTGTVFLLDSAADPDVGINSLQSYSLKTSDHFILKQHTRADGSKYAELMLQ
SGLDRERQSEHTLILTAVDGGEPQRSGTVKIHVSVLDANDNAPVFTQSTYKATVSENVLR
GTVIARVSAIDADQGYNGNVTYSFTHLEDSSCPFTINSYTGEVRLSGEIDYEVSPSYEIN
LQAKDPWGVAGASKLIIEVADVNDNSPIITMASFSGKISEDSTPGTVVALISVQDKDSGK
NGQVHLNIDENLPFKIKSSLRNYYTLVTEQNLDREKRPKYNITLTAADEGSPALSSKKTV
ILDVTDINDNAPAFNQSVYSTQVMENNSPGVALLQIHATDPDLGQNARISYFLIDAEVNG
NPVSEYFSINMESGVIQSLRSLDYEQVKEYKIRVKAQDGGSPPLSSNTTVIVRVQDQNDN
PPQVLYPVLTGGSVVAEMVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKATDRALFEV
GLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVVVNVAVADSFPEVLSEFTDFT
HDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQSRVLYHSSLPVIPYYPPRY
SDTLGTGTLQHVYNYEVCRTTDSRKSDIKYAQPMSQSLVSVDDAGTETLPNGEQPSAVSR
ISTLVS
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtttcaaacgctcagcttctatttcctccttctcttcctgcgtggcgcatat
ggagacatgagctattcttttccagaggagatgaaacgaggatcggttattggaaatata
gccaaagacctcgggctgaagacgggcgctctctctaacagaagagcccgcattgacacg
gatgggactgatgtacgttactgtgacataaacctgaataacggagagctgtttgtggct
gacaggattgaccgagaggggctttgtggcgaaaaggcttcgtgcattcttaagcacgag
cttgtgctggagaatcctcttgagcttcataggattactctacacattaatgatattaat
gataactctccacagtttaaagaagaatcgatcaatatagaaattagagagtctacattc
aggggagctcgttttgtgatagaggaggcgcacgatgcggatgtaggacaaaattcagtt
caacaatacagccttaaaaaggacgaaaatttcattttggctgctgatggaaacactatc
gagcttgttctcgataaagagcttgatcgagagaagcaaaaagagatacatttgctcctc
acagctttagatggaggctctcctcagagatcaggtacagtagtcatacacgtcactgta
ctggatgctaatgataacgccccagtgttcagccaggccgtttataaagccagtctgcct
gaaaactctcctttagatactgtagtggtcacagtgagcgcttctgatgcagacgaggga
atcaatggagatgtgacgtatgactttggacatgttactgaagatgtgaaaaagatattt
agtattgatcgtaaagttggtgagataaaagtaattggtgctgttgactatgaaactact
tcatcctttgaaatacgcgtaaaagcaaaagatggtttagggctttcatcttatgctaag
gtaatgatttctatcactgatgtgaatgataacgcccctgtagtcagtttgaaatccctg
atgaaccccataccagaagacacaacacctggtacagaggtgggcatcatcaacgtgcag
gacagagactctgagactaacagacaggtccgctgctccattcagcaaaatgtcccgttt
aagttggttccttctattaaaaactattattctctggtgagcacaggacaattggaccgt
gaactagtgtctgattacaacattacaatcactgccactgacgagggctctccacctctg
tcctcctctaaaactgttgagttatctgtagcagacatcaacgacaacccaccagtgttt
gaggaacagtcctacagcgcatatgtgagtgaaaataacaaacctggctccactttatgt
tccgttactgctcgagaccccgactggagacaaaacggtacagtgatttattctctgtta
gccggtgaggtgaacggtgccccggtgtcctcctatgtgtctgttaacggagacacgggg
gtgatccacgctgtgaggtcgtttgattacgaacagttcaggagctttaaagtggccgtg
atggccagagacaacggttctcctccgctcagcagcaacgtgagcgtcagtgtgttcata
tcggacgtgaatgacaactctcctcagatactgtaccccgccccggagggcaactccttc
atgaccgagctggtccccaaagctgcacacggaggctctctggtgtccaaagtgatagcg
gtggacgcggactccggacagaacgcctggctgtcctatcatatcgtgaaatccactgat
ccgggacttttcactattggtgtccacagcggagagatcaggacccagcgggacatttct
gaatctgacagcatgaaacagaaccttattgtggcagtgaaagataacggacaaccctct
ctctctgccacctgttccatgtatttactgatctctgataacttggctgaggtgccagaa
ctgaaggacatttcttatgatgagaagaactccaagctgacctcttatctgatcatcgcg
ctggtgtctgtgtccaccttttttctgaccttcatcatcatcatcctgggtgtgaggttt
tgtcgcaggagaaagcccagactgttgtttgacggagcagtggccatccccagcgcttat
ctgcctcctaattacgcagatgttgacggcacaggaactttacgcagcgcttacaactat
gacgcctacctgacaacagggtctagaaccagtgactttaagttcgtggcatcttacaat
gacaacacactgcctgctgaccagactctgaggaaaagcccaagtgactttgctgaagta
tttggagactgtgatgattctcctgaggtagggacatctaaagtgtcgactggaaatatg
tttttggaagcatgtttaaaaatggaccatcgaacaaacttaaaatggtggctgcatttt
ttattgctcgccctcctttttggtgtctcgtctggtgaagtccgctacgtccttcccgag
gagatgcagcgggggtcggttatcggcaatgttgcgcgggatctggggcttaaagtgtcg
gagctttatgcccgtcgagcccggattgttgcagaaggaacgagccagctgtgcgagctg
gacgctgcgtcaggcaatcttttgatcagccaacggattgacagagaggagctctgcgcg
caaaacagtgtctgcatcctacagtatcagctcctacttgaagatccccttcaagcttac
agcttagttttggacattgcagatataaatgacaacagcccagtgttcgctgcgggggag
atacaactagatttagtcgaatccacagttctcggaagacgctttcccttggagagcgcg
catgaccccgatctgggaaccaactctgtccgtgaatataaactgagcccgaatgatcac
tttgcactggaaatgagcacccaaattaacggcaatgcttatctggaactagttcttaaa
aaaccattggaccgggaggcacaagctgaacatgtattgaaaatcaatgggattgacggg
ggaaatccagtcagatcaggaactgcttcaatccatgttcgtgttttggacgccaatgat
aatgtcccagttttcagccaacgagtttacaaagcctctgtgccagagaactcggccata
gggactctcatagcaacgctaaatgccacagacttcgatgaaggtgtctatggagagata
acttactctttcagtcacctgtcagacaagattggaggggttattgaaattaaccctttg
agtggagaggttcgggtggcaggtcccattgactatgaagatgccagtacgcacgagctg
gatgttcaggccaaagatggagggggccaggcctctcactgtaaacttataattgacgtc
attgacgtaaatgacaacaagcctgtgatagagataaagtcagcctctgctaatgtggct
gaagactctaaaccaggaactatggtcgctctgatgaatgtgtatgacctggacactgga
agcagtggacgcgtcacgtgcacgatcgcagacgatgttccatttaagattgtatcagag
gtcaaaaactattacatgttagtgaccgacgggatgctcgacagagagtttcaaccagag
tttaacatcacagtgacagccactgatgcaggctccccctcactctctagtgtaaaagta
ttaacaatcgttgttaatgatatcaatgataacccaccaacttttacgcagagagagtac
aatgccaacctcttggaaaaccaacccgttggcacgtttgtgatgaaagtgaaagcagag
gacatcgatgatggctctaatgctaaaacactgtaccagatatcaagggacacaaactca
gaggtgtcctccttcctcaccatcaactcagacactggagagctcttcacatcacgcctc
tttgactacgagcagtcagtttacttccagattaaggtgacggctcgagatggaggcagt
ccttcactctccaccacctgcactgtaaacgtttttatcaaggaccagaatgacaataca
cctgttgtcctgtatcctgtccaaacttccgggttcgttgctgaagatatggtgccaatc
gaagcacctagaggttacctggtcactaaggttgtagccgtggacgcggactccggacat
aacgcgtggctgtcctacagaataatcaaagcaacgcggcctaacttgttcatggtcggc
ctgcatacaggagaagtcaggactgtgcgaccattcatggaggacgatgaacagaaacag
tctcttgtcgttttagtgactgacaacgggcccgagtctctctccgccactgctacagtc
agcatagttattggggacgggctgcctgttttaaacgaactctttgagtttgcagatgag
tcacaggacaacgacgacttaacgctctatttgatcattgccctgacagccgtttcctct
cttttgatccttttaatcagtggtgtgttttattttaagctttgccgccgtagttatgtt
taccgttcaaccaccgccagtctccctgttttccccacggcctactgcccccctagtttt
acagatttcagccgttgtgggaccctgctgaaagatgatcgctatgactccttcttgacc
actgggtcgtggaggggcgattttcgtttcagctcaaacacagacacagacacactgaaa
caaagaagtgcagcctatcagaaaaacaccctaaggcgcgctagtacagacagagctagt
ctgaaggtgagggcaggtggacctcatccctgttatgtgctgcaggctcatctagtctcc
attttgcttttctgcgttgttgctgcggtctgcggacaaattcgttattctataccagag
gagatgaggaaaggagtgtttgtcggagacgttgcaaaggacctgggcttggatgttaaa
aggttggtttctggtcgggctcgacttgttatagacgatgaaagccaatatgtcgcgctg
aaccagaacaaagggcacatcgttgtcaatgaaagaattgatagagaaaagctttgcgct
aagaaatcgccctgtagctttagtcttgaaatcgtcctcgaagatccacttgaattgttt
tctattaccatcgaaatacaagatgttaacgatcatgctcctgcttttcccaaaaaggag
atcaatttagaaataagcgaatcgacgcccacaggaactgtgttcttgcttgatagcgca
gctgatcctgacgtaggaataaactcactgcaaagttactcgttaaagacaagcgatcat
tttattctcaaacagcacactcgagcagatgggagtaaatatgctgaattgatgctgcag
agtggtttggaccgcgagaggcagagcgagcatacactcatattgacggctgtcgatggc
ggggagccgcagaggtctgggacagtaaagatacatgtatctgtcctggacgcaaacgac
aacgcaccagtttttacgcagtcaacatacaaagcaactgtctctgaaaatgtgttgcga
ggcacggtgattgctagagtcagtgccatagatgcggaccaaggttacaatggcaacgtc
acatattctttcacacacttagaggactcctcctgtcctttcacaataaattcttacacg
ggagaggtgcgactcagcggtgaaatcgattacgaggtttctcccagttacgagataaac
cttcaagctaaagatccatggggtgtagcgggtgccagcaaattaataatcgaggtagca
gatgtgaatgataacagtccaataatcacaatggcttcattttctggtaaaatttcagag
gattctactcccggtacagtcgtggcgttgatcagtgtccaagataaagattccggtaaa
aatgggcaggttcatttaaacatagatgaaaatctccccttcaaaattaaatcatctctc
aggaactattacacgttggttacagagcaaaatctcgaccgagaaaagcgcccaaagtac
aacatcactctcacggcggcagatgagggctcgcctgccctgtcaagcaagaaaacagtc
attttagacgtgacagatattaatgacaacgcaccagctttcaaccaaagtgtttacagc
actcaggtaatggaaaacaattctcctggtgttgctctgttgcagatccacgccactgat
ccggatctgggtcagaatgcacgcatatcatattttcttattgacgctgaggtcaatgga
aatcctgtctccgaatatttctccatcaacatggagagtggagtcattcagtctttgcgt
tcacttgactatgagcaagtcaaagagtataaaatacgagttaaagcgcaggatggaggc
tcgccacccctaagtagtaacacaacagttattgtgcgtgtccaggaccagaacgacaac
ccccctcaggtcctgtacccagtcctgactggtggctctgtggtggctgagatggtgcct
cgtgcagcagatgtgggctatctggtgactaaagtggtggctgttgatgtggactctgga
cagaatgcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtg
ggcttacagaatggagaaataagaactatccgccaagtgactgataaagatgctgtgaaa
caaagactgactgttatagtggaggacaacgggcagccctctcgttcagctacagttgtt
gtcaacgtggcggtggcggacagcttccctgaagtgctgtcggagttcactgactttaca
cacgacaaggagtacaatgacaacctgactttttacttagtgctggctctggctgtagtg
tccttcctcttcatcacgtgtttagtggttatcatatcagtgaaaatctacaggtggaga
cagtctcgtgtcctgtatcactccagtctccctgtgattccatattatccaccacgttac
tcagacactttggggacagggactctccagcacgtgtacaattacgaggtttgtaggacg
actgactccagaaagagtgacatcaagtatgcgcagccgatgagtcaaagtttggtcagt
gtggatgacgccggaactgaaactctgccgaatggagaacagccatcagcagtatctcgc
atatctactctggtaagttag
DBGET
integrated database retrieval system
