Semicossyphus pulcher (California sheephead): 138598734
Help
Entry
138598734 CDS
T10596
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04120
Ubiquitin mediated proteolysis
spul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138598734 (syvn1)
04120 Ubiquitin mediated proteolysis
138598734 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spul04121
]
138598734 (syvn1)
Enzymes [BR:
spul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138598734 (syvn1)
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138598734 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
zf-HC5HC2H
FAR1_N
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
138598734
NCBI-ProteinID:
XP_069526675
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MNIYIFKQETPVKPYKEQVFITNPVVSVADFKMVRAALVTATSLALTGAVVAHAYLLKHQ
FYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMRKVFFGQLRAAELEHLIERSWYAVTET
CLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWVFHLRVLSLMGLL
GVLDFLFVNHACQSIITRGASVQLVFGFEYAILMTMVLTTFIKYVLHTVDLQSENPWENK
AVYMLYTELFTGFIKVLLYIAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRA
IRNMNTLYPDASPEDLQASDNVCIICREEMVTGAKKLPCNHIFHSSCLRSWFQRQQTCPT
CRMDVLRVSNNNQTPTPAQAPPPAPAAPANAPAVPPANVAPGMLPGFPPGMFPFWGPFPA
VPPPAAEAAAPGSTDASQDSTEANQAAGTSQPTLSTADTAAASVTASGSAIPGFPFSFPP
PPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSEEELRELEAEGRQGLEARLQCLQNIHTL
LDAAMLNIHHYLSSVATLNPPRAERITGESSGRNHAASSPAADSTMDSPREEKESPSSDG
DNREAVSFQPTDSTPIALDLEGLEKIQEGVVVAVEDGEPNTAELRRRRLRKLDTSSSSPS
PDN
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaacatatacatatttaagcaggagacacccgtcaaaccatacaaggagcaagtcttc
attacaaatccagtcgtatctgtagctgacttcaaaatggtgcgagcagccttggtgaca
gccaccagtctggcattgactggggctgtggtggcacatgcttacctcctcaaacatcaa
ttctacccgactgtggtctacctaaccaaaagcagccccagcatggcggtgttgtacatt
caggcctttgttttggtgtttctgctgggaaagttcatgagaaaggtcttttttggacag
ctaagggctgcagaattggagcatctaattgagcgctcctggtatgcagtgactgagaca
tgcctagcattcactgtgttcagggatgacttctcccctcgctttgtcgccctcttcacc
cttctgctcttccttaagtgctttcactggctggctgaggaccgggtggactttatggaa
cggagtccaaacatatcctgggtttttcacttgagagtactatctctcatgggattgctg
ggggtcctggacttcctgtttgtcaaccatgcctgccagagcatcatcactcgaggagcc
tcagtccagcttgtttttggatttgagtatgccatcctgatgaccatggtgctgacaacc
ttcattaaatatgtgctgcacacagttgacctgcagagtgagaatccttgggaaaacaag
gcagtctatatgctctacactgagctattcacaggtttcatcaaagtgctcctgtacatt
gcctttatgaccatcatgataaaggtccacaccttccccctgtttgcaattcgcccaatg
tatctggctatgaggcagttcaagaaagctgtaacagatgctataatgtctaggagagcc
attcgcaacatgaatacattataccctgatgctagtcctgaagacctgcaggcctctgat
aacgtctgtatcatctgtcgagaggaaatggtcaccggagccaagaaactaccttgtaat
cacattttccactctagctgcttgcgctcctggttccagaggcagcagacctgccccacc
tgtcgcatggacgtcctccgagtgtctaataacaaccagactccaacccctgcccaggcc
ccaccccctgctcctgcagcccctgccaacgcccctgcagtcccacctgctaatgttgcc
ccaggcatgttacctggctttccacctggtatgttcccgttctggggtccctttcctgca
gtgcctcctcctgctgcagaagctgcagctcctgggtctacagatgcttcacaagacagc
acagaggctaatcaggcagctggcaccagccagccgaccctgtcaactgcagacaccgct
gctgcatcagtaactgcttcagggtcggcaatcccaggcttcccgttttcctttccccct
cctccgtttcccactgcaccatggttgcccatgccacctcctcctccctttgtctcgtca
atgcctcctcctccaccttctctgtcccggctgtcagaggaggaattaagggagctggag
gcagaaggccgacagggtcttgaggccagactccagtgtcttcagaacatccacaccctg
ctagatgccgccatgctcaacatccaccactacctcagcagcgttgccactctcaatcct
cctcgcgccgaacgtatcactggagaatccagcgggagaaatcatgctgcctcatctcct
gcagctgacagtacaatggacagccccagagaggagaaagagtcccctagctctgatggg
gacaacagagaagcggtctcctttcagccaacggactctacacccattgctttggactta
gaaggactggaaaaaattcaggaaggagtggtagtggcagtggaagacggggagcccaac
actgctgagctgaggcgccgccgccttcgtaaactggacacatcatcatcttcaccttct
cctgacaactga
DBGET
integrated database retrieval system
