Semicossyphus pulcher (California sheephead): 138599185
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Entry
138599185 CDS
T10596
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138599185 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138599185 (dcp1b)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138599185 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
138599185 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
138599185
NCBI-ProteinID:
XP_069526783
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MTATSAGSSGCLTAKGLDISLAALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQRMKILTQQEQALAQSQGGWLSPAGGGVGGGVIGGVGIVVGGGGGGGGGVVSG
GGEAKGVDIIQMLTKARTEYDKGQSTSEPKEIGGSSILTGNPNLIKPIPVKPNTQDTESA
EPKPLSLATLFGSQQQHQHPSKPHPVSPLAGVAAGSPSTGKVTRPPVARALTYEETLKSG
RGVTSKEGIIVVPGGTERGLVAVIGGQKVGEDAGHVAKQQQEQPQHCPAIQKLMQGQRGV
GGVLQTLSESPENRLCDNGVPLEHHLHHHHLIHHQQQQQQQQQQQHHHHHHHHPQQQLQS
DPIKRLFQAQPLPLQSSTPFTSAAPQQFCSHPPPLLPNPHLSSQPIMVDSVTWSHLQGQQ
SQQHFVSISKPQADAQHGSQSALTVHGAGFLPSQVTNDQVLPPPQALSSQMPGVVSPHEL
LQKLQLVQQEQSLASHDPPRLGPGLAPRFLGPTQGPGAGAPVPNQSTITAGQKAALQLQV
ISPQRIPATVAPNLLLSPSVFTQAKSSGGSSAVAPSTLLRPDEARVLSKSQLQASLLHLI
QTDSSFLDTIYKAYVSRCANDSSSKY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttctgcaggtagcagtggctgcctcacggctaaaggactggacattagt
ctagctgctttacagcggcaagacccatacatcaataacattgtggacgtggccagccaa
gtcgccctgtacacttacaacaacagggcaaatgagtgggagaagacagaggtggaaggc
accctcttcatctacacaagactggcgtctcccaggcatggtttcactattatgaacaga
ctcagtatggagaacttgacagagccaatcaccaaagacctggacttccagctccagcac
cccttcctgctttaccgcaatgctcgattggttatccatgggatttggttctacgataag
gaggactgtcaacgcattgcccagaggatgaagattctgacccagcaggagcaggcccta
gctcagtctcagggtggatggttgtccccagcaggaggaggagttggaggaggagtcatt
ggaggagttggaattgtagtcgggggaggaggaggaggaggagggggagtagtaagcggt
ggtggcgaagcaaaaggagtggacatcatccagatgttgaccaaagcacgtacagagtat
gacaaggggcagtcaacatccgagccaaaggagattggtggcagcagcattctgactgga
aaccccaacctgatcaaaccaatacctgttaaaccaaacactcaggacactgaaagtgct
gaacccaagcccctctctctggccactctttttggctctcaacagcagcatcaacaccca
tccaaacctcacccagtctctcctttggctggggttgcggcggggtcgccatcaacagga
aaagtcacccgcccgcctgtggcccgcgcgctgacatacgaggagaccctgaaatctggc
agaggtgtgacttccaaagaagggatcatcgtcgtacctgggggaacagaaagaggtctc
gtggctgtaattggaggacaaaaagtcggggaagatgctggacatgttgctaagcaacag
caggagcagcctcagcactgcccagccatccagaagctcatgcagggtcagagaggggtt
ggaggggtgcttcagactctgtcggagtcccccgagaacaggctgtgtgacaatggggtg
cctctggagcatcacctccaccatcaccatctgatccaccatcagcagcagcagcagcag
cagcagcagcagcagcaccaccaccatcaccatcatcatccacagcagcagcttcaatct
gacccaataaagagacttttccaagcccaaccacttcctcttcaatcatcaacccccttc
acctctgctgctccacaacagttttgctcccaccctcctccactgctgccgaacccccac
ctctcttcccagcccatcatggtggattctgtgacatggtcccacctccaaggccaacaa
agccagcagcattttgtcagcatatctaaacctcaagcagatgcacagcacggcagccaa
tcagctttgactgtacatggagcaggttttctgccatctcaggtgaccaatgaccaagtc
ctcccacctccacaagctctgtcttcccagatgcccggtgtggtgtcgcctcatgagctc
ctgcagaagctccagctggtccagcaagagcaaagcctggcctcccacgatccccctcga
ctcggtccgggactggcccctcgatttcttgggcccactcaaggtccaggtgccggagcc
ccagtcccaaaccagagcacaatcactgcaggtcaaaaggctgcgctgcagttgcaggtg
atttccccccagaggataccagccaccgtggcccccaacctgctcctctcccccagtgtg
ttcactcaggcaaagtctagcggcggctcgtcagcagttgccccctcaactctgctcaga
ccagatgaggccagagttttgtccaaaagccagcttcaagcctcactgctgcatctgatc
caaactgacagctcattcctggacaccatctacaaagcctacgtcagccgctgtgctaat
gactccagcagcaagtactga
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