Semicossyphus pulcher (California sheephead): 138599826
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Entry
138599826 CDS
T10596
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04140
Autophagy - animal
spul04148
Efferocytosis
spul05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138599826 (vps11)
04148 Efferocytosis
138599826 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138599826 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138599826 (vps11)
Membrane trafficking [BR:
spul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138599826 (vps11)
Hops complex
138599826 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
Beta-prop_WDR3_1st
zf-C3HC4_2
Beta-prop_WDR36-Utp21_1st
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
ADIP
Beta-prop_EML_2
zf-ANAPC11
Rab11-FIP3
zf_RING_Vps8_fungal
zf-RING-like
TSGP1
CC_Bre1
Kbp-5
ToxA_N
Motif
Other DBs
NCBI-GeneID:
138599826
NCBI-ProteinID:
XP_069527685
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTLKDPVDNGKNFVLPSGISACDSGRGHIVLGDMDGKIWTLTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTNLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDTKSPNKTEFDSRGSSPSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGNMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTLLLKGLCTNYQPSGDTAERDSLERGRFDKANSEEFIPIFANNPRELKAFLEHMIE
VDPHSPQGVYDTLLELRLQDWAHEQDPERKNVLQGEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagaaaatttgtcttttttgataaagacacactgaaggac
cctgtggataatgggaaaaattttgttcttccgagcggaatatcggcctgtgactccggc
cgagggcacatcgttctgggagatatggatggcaagatctggactctgacacgctccctg
cagctgacatcttttcaggcctacaagttgcgagtaacacacctgtaccagctgaagcag
cacagcatcctggtatcagttgggcaggatgaacacggaataaaccctctagtaaaggtg
tggaaccttgacaagagagacagtggaaatcctctctgcactaggatttttcccgcaatt
cctggcaacaaaccaacggaagtgtcttgcctcagtgtacatgaaaacctcaacttcatg
gccattggcttcacagatggcagtgtggttttgaccaaaggtgacatcacacgagatcgt
cacagtaaaactctgactctgcacgagggaaccagcccagtcaccggtctcgctttccgc
caagtggcaaaggtcacaaacctgtttgttgccactttggagaaagtgcattgctacacc
ctgtccatcaaggagtatcctaaagttgagctggacacacacggctgtgcactgcgttgc
tcctccctggcagatccctcccaggattcccagttcattgtggcaggtgatgagtgcgtg
tacctgtaccagcctgatgaacgaggtccctgctttgccttcgatggacacaagctgttg
gcccactggcaccgcggatatctgtttttactcatcagagacacaaagtcacccaacaag
acagagtttgacagcagggggagctctccatcagacaaacaacttctgaccatctatgac
ctggacaacaagttcatcgcctacagtgcctcttttgatgatgtcatcgatgtggtggca
gagtggggctctttctacatcctgaccagagatggaaacatgtttgttcttcaggagaaa
gacacacagaccaaactggagatgctgtttaagaagaatctgtttgtgatggccataaac
ctggctaagagccagcacctggacaatgacggactgtcagagatcttcagacagtatggt
gatcacctttaccttaaaggagaccatgacggagccatccagcagtacattcgaaccatt
ggaaaactggagccatcttacgtcatcaggaaattcctggacgcacagaggatccacaac
ctgacagcatatctgcaagccctgcacaggcagtcactggccaacgcagaccacaccaca
ctgctgctgaattgttacaccaagctgaaggacagctccaagctggaggagttcattaag
agcagtgaaagtgaagtccactttgatgttgagatcgccatcaaggttctgcggcaggcc
ggctaccacagccacgctgtgttcttggctgagaaacacatgcaccatgaatggtacctg
aagatccaactggaagacctcaagaactatcaggaagggctgcgttacattggacgtctg
ccttttgaacaagctgagagcaacatgaagcgttacggcaagacgctgatgcaccacgtt
cctgaaggtaccacgctgctcctgaagggcttatgcaccaactaccaacccagtggagac
actgctgaaagagacagtctggagagaggccggtttgacaaggccaactctgaggaattc
atcccaatttttgcaaacaaccctcgggagctgaaagctttcctggagcacatgatcgag
gtggacccccactctcctcagggtgtgtatgacacactgctggagctccggctgcaagac
tgggcacacgaacaagaccctgagagaaaaaatgtcctgcagggggaagctgtatcgctg
ctgaggagtgacaacactgtgtttgacaaagctctggtcctctgccagatgcacaacttc
aaagaaggcgtcctctacctttacgagaagggcaaactatatcagcagataatgcattac
cacatgcagaatgaggagtacggaaaggtggtcgaggcctgcaagcgctacggggaccaa
gagggatgcctttgggagcaggcgctgggttactttgcaagaaaagaagaagactgcaag
gcctacattagtgaggtccttcatcacattgaccagaacaacctcatgcctccattacta
gtggtgcagacactggcacacaactcgacagccactctctccgtcatcaaagactacctt
atcaacaagttgcagagggagagccagcagatagaagatgatgagcgcaaaatccgccag
tatcgcgaggaaacggctcacctccgctcggagattcaggagctcaaaacgagtgccaag
atattccagaagaccaagtgcaacatgtgtaacagccccctggagctgccgtctgttcat
ttcctgtgcagccactcctttcaccaacactgcttcgaaagctatgcagaaagtgaggct
gagtgcccaacctgcacgccagagaaccgtaaagtcatggacatgctgcgcgcccaggac
cagaaacgggacctgcatgaccacttcaacagacagctacgcagctctaatgatggtttc
tctgttgtggcggactacttcggtcgaggagtgtttaacaaactgactctggtcaccgac
ccgcctggtagcaaaaccgttgggagtctagaagtcaacctgcagagagatcttcttatc
cacaccaagagaaactgttag
DBGET
integrated database retrieval system
