Semicossyphus pulcher (California sheephead): 138600891
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Entry
138600891 CDS
T10596
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138600891 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138600891 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138600891 (pcdh7b)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138600891 (pcdh7b)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Protocadherins
138600891 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_2
Mid2
TMEM154
LYRIC
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
138600891
NCBI-ProteinID:
XP_069528523
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGT
LYLLPTATDRDFGRNGIERYELIQDNGDNSRRLGSSGDSFSGKRRFEEGASRSSVFELQV
ADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRF
EKSVYEADLPENSSPGAPILQLKAADADVGVNGQIEYVFGAATESVRRLLRLDESTGWLS
VLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDG
IANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLH
TSAPLDYEATQEYNVVIVAVDSGSPSLASNNSLIVKVGDTNDNPPVFSQNVVEVSFPENN
PPGERVTTVAAIDADSGKNAEIAYSLDSSVNGLFSIDADSGDIRVNTILDREQTERYEFK
VIAKDKGINTLQGSATVVVLVADKNDNAPKFMQDVFTFYVKENLEPNSPVGMVTVIDADK
GQNAEMSLFIEEEEDFSIENDTGTIFSTLSFDREQKTTYTFCVKAVDGGDPPKSATATVS
LFVMDENDNAPTVTFPINSSYTLLPPSSNIRTVVRTVIATDTDTGPNADLSYSIIGGNPF
KLFEIDGGTGVISLVGKLEQKHFGLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTVV
EAQVARSLSTSLNTNIAGDPNYDLSKQQLSIVIGVVSGIMTVILIILVVVMARYCRPKNK
NGYEAGKKDHEDFFTPQQHDKSKKPKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNE
KLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANT
FVGTGDNISLGSDHCSEYSSQTINKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLD
ESETPSSKSSSGPRLGALPLPEDSYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTREC
DEYGHSDSCWMPVRTSPERRPSKSTTTPQQPKLSTFMSGNGSGSSSSAEQPGSQETLAMA
AMANGDPTAAHMMGDRNRNLLNKKMASSSSSYEAFGSPSYGSPGSGEETLGHPTEEIPLA
PTGEYKPTTCGTLTRREVYL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgatgaaaatgagtgttttatagattttgaagtgtcagtgattggaccagct
cagagctgggtcgacctctttgagggaaaagtcatcatattagatataaatgacaacact
ccgtctttcccttcccctgtcttgacactgtctgtggaggaaaacagacccattggaacc
ctttatctgcttcccacagccacagacagagattttggaagaaatggaatagagcgatat
gagcttatccaggacaatggggacaactcaaggcgcttgggctcttctggggattcattc
tccgggaagaggagatttgaggaaggcgcaagcaggagcagcgtctttgaactgcaagtt
gctgacactactgatggagagaagcagcctcaactcatcattaaaggggcccttgatagg
gagcagagagactcctatgagcttacactgcgtgtgagggatggaggtgatccccctcgc
tcttcccaggccatccttagggtgatgatcaccgatgtgaatgacaacagccctcggttt
gagaagagtgtgtatgaagctgacctaccggaaaacagctcccctggcgcccccatactt
cagctgaaagcggctgatgcagacgtgggggttaatggtcaaatagagtatgtgttcggg
gcagccacagagtcagtcaggaggctgctgaggttggatgagagcacagggtggctgagt
gtcttgcaccgcattgaccgtgaagaagtgagccaactgaggttcacagtaatggcccgt
gaccgaggccagccaccgaaaatggacaaggccactgtggtgctgaacatcaaggatgag
aacgacaacgttcctgctattgagatacggaaaattggacgcattttcttaaaagacggg
atagcaaacgtggctgaggatgtggtggtggacacacccatcgccttggttcaggtgtca
gaccgggaccagggggagaacggcattgtcacctgcacggtggtaggggatgtgcccttt
cagctcaaaccagccagtgagatggagggtgagcagaataaaaagaaatacttcctgcac
acgtctgcaccactggactatgaggccacacaggaatacaatgtggtcatagtggctgtg
gactctggaagccccagcctggcaagtaataactctcttattgtcaaggtgggcgacact
aatgacaaccctcctgtctttagtcagaatgtcgtcgaggtgtcgtttccagaaaacaat
ccccctggcgagagggtgacaacagtggcagccatcgacgcagatagtgggaagaatgct
gaaatagcctattccctggactcatcagtaaatgggcttttctctatcgatgcagacagt
ggtgacatccgggtaaacaccattctggacagagagcaaacggagcgctacgaattcaaa
gtgatagccaaagataagggcataaacacacttcagggctctgcaacagtggttgtcctt
gtggccgataagaatgacaatgcaccaaagttcatgcaggatgtgttcaccttctatgtc
aaagagaaccttgagccaaacagcccagttggcatggttacagtcattgatgcggataaa
ggccaaaatgctgagatgagtcttttcattgaggaggaggaggacttttcaatcgagaat
gacactgggactattttctccaccctgtcctttgaccgagagcagaaaactacatacacc
ttctgtgtcaaagctgtggatggtggtgatcctcccaaatctgccaccgccacagtttca
ctttttgtcatggatgaaaatgacaacgcaccaactgtcactttccccataaacagctca
tacaccctccttcccccttccagtaacatcagaacggtagtcaggactgtcattgccact
gataccgacaccggccccaatgcagacctgagctacagcatcatcgggggaaaccctttc
aagttgtttgagattgatgggggcactggggtcatttctctggtggggaagttggagcag
aagcactttggcctccacagactggtggtccaggtgaacgacagtggccagccctctcag
agcaccaccacattagttcacgtgtacgtcaatgagactctttcaaattccacagtcgtg
gaggcccaggtggctcggagcctgagcacgtctctcaacaccaacatcgccggtgacccc
aactatgatcttagcaaacagcagttaagcattgtgataggagtagtttcaggcatcatg
acagtcatcctcatcattcttgttgtcgtcatggcccgttactgccgccccaagaacaag
aatggctacgaggccggcaagaaggaccacgaggacttcttcacaccccagcagcacgac
aagtccaagaagcccaagaaagacaagaagaagcagaagtccaaacagcccctctacagc
agtattgtcactgtagaggcatccaaacccaacgggcagcgatacgacggcgtcaacgag
aagctgtcggacagtcctggcatgggtcgctaccgttcggtcaacggagggccgggaagc
ccggatctggcccggcactacaagtccagttcgccactccctactgtccagcttcacccg
cagtcgccaacagctggtaaaaagcaccaggccgttcaggacctgccccctgccaatacc
tttgttggcaccggagataacatttcccttggatctgaccactgctctgaatacagcagt
caaactatcaacaagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagc
cagccccaggaccctcaccagcagggatcgctgcagagctgctacgacagcggcctggac
gagtcggagacgcccagcagcaagagctcgtcgggcccccgcctgggcgcccttcccctg
cccgaggacagctacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatg
gaaaatgactctcggcccttgcctgacgtagccatgactggcaaatgcacccgggaatgc
gacgagtatggccactcggactcctgctggatgcctgtgcgcacgtcgcctgagcgacgg
ccatccaagtcaaccaccaccccacaacaaccaaagctttccactttcatgagcggcaac
ggcagcggcagcagcagcagcgccgagcagcccggcagccaagagaccctcgccatggcc
gccatggccaacggagaccccacggccgctcacatgatgggcgaccgcaatcgcaacctg
ctcaacaagaagatggcctcctcctcctcctcctacgaggcgttcggctcgccttcctac
ggctccccaggaagcggagaggagacgctgggccacccaaccgaggagatccctctggca
cccactggggagtacaagcccacaacctgtggtactttgacgcgacgggaggtatacctg
tga
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